RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 STK17AQ9UEE5 414 aa6.39□□□□□ -1.39
NUP98-215ENST00000529063 FBXO2Q9UK22 296 aaPredicted RBP6.39□□□□□ -1.39
NUP98-215ENST00000529063 CDH9Q9ULB4 789 aa6.39□□□□□ -1.39
NUP98-215ENST00000529063 FNDC3AQ9Y2H6 1198 aaKnown RBP6.39□□□□□ -1.39
NUP98-215ENST00000529063 MSRB2Q9Y3D2 182 aa6.39□□□□□ -1.39
NUP98-215ENST00000529063 CLIC4Q9Y696 253 aa6.39□□□□□ -1.39
NUP98-215ENST00000529063 IGSF10Q6WRI0 2623 aa6.39□□□□□ -1.39
NUP98-215ENST00000529063 MUC22E2RYF6 1773 aaPredicted RBP6.39□□□□□ -1.39
NUP98-215ENST00000529063 BPTFQ12830 3046 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 IGHV1OR15-9A0A0B4J2B8 117 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 A0A1W2PQF6 199 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 CLDN5O00501 218 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 HOXC11O43248 304 aaPredicted RBP6.38□□□□□ -1.39
NUP98-215ENST00000529063 COCHO43405 550 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 GREM1O60565 184 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 GJB3O75712 270 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 PRPF6O94906 941 aaKnown RBP6.38□□□□□ -1.39
NUP98-215ENST00000529063 LDHAP00338 332 aaKnown RBP6.38□□□□□ -1.39
NUP98-215ENST00000529063 CST3P01034 146 aaPredicted RBP6.38□□□□□ -1.39
NUP98-215ENST00000529063 APODP05090 189 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 CD59P13987 128 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 GAP43P17677 238 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 GRIK1P39086 918 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 GRIA2P42262 883 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 PGFP49763 221 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 RNF144AP50876 292 aaPredicted RBP6.38□□□□□ -1.39
NUP98-215ENST00000529063 PDE6CP51160 858 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 ARSDP51689 593 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 SIM1P81133 766 aaPredicted RBP6.38□□□□□ -1.39
NUP98-215ENST00000529063 CYP27A1Q02318 531 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 LMAN2Q12907 356 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 TAF10Q12962 218 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 ACAP1Q15027 740 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 HSF5Q4G112 596 aaPredicted RBP6.38□□□□□ -1.39
NUP98-215ENST00000529063 SPDYCQ5MJ68 293 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 EOGTQ5NDL2 527 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 LY6G5CQ5SRR4 150 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 LYSMD4Q5XG99 296 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 EGFLAMQ63HQ2 1017 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 RAB44Q7Z6P3 723 aaPredicted RBP6.38□□□□□ -1.39
NUP98-215ENST00000529063 GPD1LQ8N335 351 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 CHCHD4Q8N4Q1 142 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 MINDY1Q8N5J2 469 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 DEFB119Q8N690 84 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 RASSF8Q8NHQ8 419 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 CCDC26Q8TAB7 109 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 MYCBPAPQ8TBZ2 947 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 CACTINQ8WUQ7 758 aaKnown RBP6.38□□□□□ -1.39
NUP98-215ENST00000529063 HPS3Q969F9 1004 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 ANKRD36BP1Q96IX9 119 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 HSH2DQ96JZ2 352 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 SPACA7Q96KW9 195 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 C8orf48Q96LL4 319 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 CEP295NLQ96MC4 621 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 ACOX2Q99424 681 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 NUSAP1Q9BXS6 441 aaKnown RBP6.38□□□□□ -1.39
NUP98-215ENST00000529063 POLMQ9NP87 494 aaPredicted RBP6.38□□□□□ -1.39
NUP98-215ENST00000529063 ARHGEF4Q9NR80 690 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 PPP4R2Q9NY27 417 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 CALCOCO1Q9P1Z2 691 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 FAM8A1Q9UBU6 413 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 GGT7Q9UJ14 662 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 EXOC7Q9UPT5 735 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 KIF3AQ9Y496 699 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 GPC6Q9Y625 555 aaPredicted RBP6.38□□□□□ -1.39
NUP98-215ENST00000529063 TMEM131Q92545 1883 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 MYH10P35580 1976 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 TP53BP1Q12888 1972 aaPredicted RBP6.38□□□□□ -1.39
NUP98-215ENST00000529063 CKAP5Q14008 2032 aa6.38□□□□□ -1.39
NUP98-215ENST00000529063 GCN1Q92616 2671 aaKnown RBP6.37□□□□□ -1.39
NUP98-215ENST00000529063 E2F8A0AVK6 867 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 EIF5BO60841 1220 aaKnown RBP6.37□□□□□ -1.39
NUP98-215ENST00000529063 PHACTR2O75167 634 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 TULP3O75386 442 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 TACC1O75410 805 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 ALDH1A2O94788 518 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 BMP15O95972 392 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 CFIP05156 583 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 SERPINF2P08697 491 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 ZDHHC11BP0C7U3 371 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 MBL2P11226 248 aaPredicted RBP6.37□□□□□ -1.39
NUP98-215ENST00000529063 ANXA13P27216 316 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 HOXD12P35452 270 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 WASP42768 502 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 TNFRSF4P43489 277 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 RPL6Q02878 288 aaKnown RBP6.37□□□□□ -1.39
NUP98-215ENST00000529063 IFRD2Q12894 506 aaPredicted RBP6.37□□□□□ -1.39
NUP98-215ENST00000529063 MYO1EQ12965 1108 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 RABEP1Q15276 862 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 MAPRE1Q15691 268 aaKnown RBP6.37□□□□□ -1.39
NUP98-215ENST00000529063 FAM173BQ6P4H8 233 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 XKR5Q6UX68 686 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 PAQR9Q6ZVX9 377 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 TRAPPC11Q7Z392 1133 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 BRAPQ7Z569 592 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 PROSER1Q86XN7 944 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 WDR49Q8IV35 697 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 BBS7Q8IWZ6 715 aa6.37□□□□□ -1.39
NUP98-215ENST00000529063 ZNF513Q8N8E2 541 aaPredicted RBP6.37□□□□□ -1.39
NUP98-215ENST00000529063 NAT16Q8N8M0 369 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms