RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 LIN7AO14910 233 aaPredicted RBP13.52□□□□□ -0.25
RBM39-243ENST00000528062 LDHAP00338 332 aaKnown RBP13.52□□□□□ -0.25
RBM39-243ENST00000528062 SYN1P17600 705 aa13.52□□□□□ -0.25
RBM39-243ENST00000528062 RASSF2P50749 326 aa13.52□□□□□ -0.25
RBM39-243ENST00000528062 DSC3Q14574 896 aa13.52□□□□□ -0.25
RBM39-243ENST00000528062 BBS9Q3SYG4 887 aa13.52□□□□□ -0.25
RBM39-243ENST00000528062 PTPN20Q4JDL3 420 aa13.52□□□□□ -0.25
RBM39-243ENST00000528062 ZC3H12AQ5D1E8 599 aaKnown RBP13.52□□□□□ -0.25
RBM39-243ENST00000528062 ATF7IP2Q5U623 682 aa13.52□□□□□ -0.25
RBM39-243ENST00000528062 DENND1BQ6P3S1 775 aa13.52□□□□□ -0.25
RBM39-243ENST00000528062 ZPBP2Q6X784 338 aa13.52□□□□□ -0.25
RBM39-243ENST00000528062 DSTYKQ6XUX3 929 aa13.52□□□□□ -0.25
RBM39-243ENST00000528062 C4orf50Q6ZRC1 276 aa13.52□□□□□ -0.25
RBM39-243ENST00000528062 ZNF398Q8TD17 642 aa13.52□□□□□ -0.25
RBM39-243ENST00000528062 PTCD3Q96EY7 689 aaKnown RBP13.52□□□□□ -0.25
RBM39-243ENST00000528062 ANKRD27Q96NW4 1050 aa13.52□□□□□ -0.25
RBM39-243ENST00000528062 MANSC1Q9H8J5 431 aa13.52□□□□□ -0.25
RBM39-243ENST00000528062 KCNK13Q9HB14 408 aa13.52□□□□□ -0.25
RBM39-243ENST00000528062 SAR1AQ9NR31 198 aa13.52□□□□□ -0.25
RBM39-243ENST00000528062 RALGAPA2Q2PPJ7 1873 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 C2orf71A6NGG8 1288 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 LINGO3P0C6S8 592 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 CSF2RAP15509 400 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 PSMA2P25787 234 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 PHBP35232 272 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 TAF5Q15542 800 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 SCARA5Q6ZMJ2 495 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 BBS12Q6ZW61 710 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 POLNQ7Z5Q5 900 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 PCGF5Q86SE9 256 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 RTN4RL1Q86UN2 441 aaPredicted RBP13.51□□□□□ -0.25
RBM39-243ENST00000528062 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.51□□□□□ -0.256e-6■■■□□ 15.3
RBM39-243ENST00000528062 CEP120Q8N960 986 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 SERAC1Q96JX3 654 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 OSBPL1AQ9BXW6 950 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 EIF2AQ9BY44 585 aaKnown RBP13.51□□□□□ -0.25
RBM39-243ENST00000528062 FBXO6Q9NRD1 293 aaPredicted RBP13.51□□□□□ -0.25
RBM39-243ENST00000528062 HEY2Q9UBP5 337 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 PIN4Q9Y237 131 aaKnown RBP13.51□□□□□ -0.25
RBM39-243ENST00000528062 TNFSF13BQ9Y275 285 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 CFAP69A5D8W1 941 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 TM9SF1O15321 606 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 LUC7L3O95232 432 aaKnown RBP13.51□□□□□ -0.25
RBM39-243ENST00000528062 TROVE2P10155 538 aaKnown RBP eCLIP13.51□□□□□ -0.25
RBM39-243ENST00000528062 CDH5P33151 784 aaPredicted RBP13.51□□□□□ -0.25
RBM39-243ENST00000528062 ABCD1P33897 745 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 KLHL38Q2WGJ6 581 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 DEFB128Q7Z7B8 93 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 ZBTB33Q86T24 672 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 BRSK2Q8IWQ3 736 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 EMC1Q8N766 993 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 FAM71DQ8N9W8 422 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 DBF4BQ8NFT6 615 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 IMPG2Q9BZV3 1241 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 CDT1Q9H211 546 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 VPS11Q9H270 941 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 CHMP2BQ9UQN3 213 aa13.51□□□□□ -0.25
RBM39-243ENST00000528062 TTC3P53804 2025 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 TOM1L1O75674 476 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 RAG1P15918 1043 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 ATP6V1C1P21283 382 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 KDELR1P24390 212 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 SERPINB3P29508 390 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 ETV4P43268 484 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 GRIK3Q13003 919 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 PCBP1Q15365 356 aaKnown RBP eCLIP13.5□□□□□ -0.25
RBM39-243ENST00000528062 SEPT7Q16181 437 aaKnown RBP13.5□□□□□ -0.25
RBM39-243ENST00000528062 TAZQ16635 292 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 SYCP2LQ5T4T6 812 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 SH2D5Q6ZV89 423 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 PALM2Q8IXS6 379 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 TMEM192Q8IY95 271 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 LBHD1Q9BQE6 289 aaPredicted RBP13.5□□□□□ -0.25
RBM39-243ENST00000528062 HTATIP2Q9BUP3 242 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 PHACTR1Q9C0D0 580 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 NIF3L1Q9GZT8 377 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 ZFATQ9P243 1243 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 XPO7Q9UIA9 1087 aaKnown RBP13.5□□□□□ -0.25
RBM39-243ENST00000528062 GPR182O15218 404 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 DHRS4L1P0CG22 281 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 TUBP50607 506 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 TAP1Q03518 808 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 C16orf59Q7L2K0 433 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 TTC7BQ86TV6 843 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 TMEM130Q8N3G9 435 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 RSAD2Q8WXG1 361 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 BADQ92934 168 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 SKA1Q96BD8 255 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 TSSK1BQ9BXA7 367 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 PCDHGC3Q9UN70 934 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 COL4A6Q14031 1691 aa13.5□□□□□ -0.25
RBM39-243ENST00000528062 HAUS5O94927 633 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 CHRM1P11229 460 aaPredicted RBP13.49□□□□□ -0.25
RBM39-243ENST00000528062 KRT3P12035 628 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 BGNP21810 368 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 GCKP35557 465 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 ELK3P41970 407 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 ASPAP45381 313 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 NEK3P51956 506 aa13.49□□□□□ -0.25
RBM39-243ENST00000528062 NAIF1Q69YI7 327 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms