RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 PRKAR1AP10644 381 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 MBL2P11226 248 aaPredicted RBP7.4□□□□□ -1.22
VPS26B-204ENST00000527586 LIFP15018 202 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 PRKCHP24723 683 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 LRPAP1P30533 357 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 TRAPPC10P48553 1259 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 HARS2P49590 506 aaKnown RBP7.4□□□□□ -1.22
VPS26B-204ENST00000527586 ANTXR2P58335 489 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 KRTAP10-9P60411 292 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 CTTNQ14247 550 aaKnown RBP7.4□□□□□ -1.22
VPS26B-204ENST00000527586 DEFB109BQ30KR1 87 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 C14orf28Q4W4Y0 310 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 NT5DC1Q5TFE4 455 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 GUSBP11Q6P575 273 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 DDX42Q86XP3 938 aaKnown RBP eCLIP7.4□□□□□ -1.22
VPS26B-204ENST00000527586 BBS7Q8IWZ6 715 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 DCP1BQ8IZD4 617 aaKnown RBP7.4□□□□□ -1.22
VPS26B-204ENST00000527586 REXO1Q8N1G1 1221 aaKnown RBP7.4□□□□□ -1.22
VPS26B-204ENST00000527586 THEM5Q8N1Q8 247 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 ZNF713Q8N859 430 aaPredicted RBP7.4□□□□□ -1.22
VPS26B-204ENST00000527586 DSCC1Q9BVC3 393 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 BBS2Q9BXC9 721 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 CCDC113Q9H0I3 377 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 SLKQ9H2G2 1235 aaPredicted RBP7.4□□□□□ -1.22
VPS26B-204ENST00000527586 SYNDIG1Q9H7V2 258 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 ANO2Q9NQ90 1003 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 RGL1Q9NZL6 768 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 TRPM5Q9NZQ8 1165 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 MAP10Q9P2G4 905 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 LRWD1Q9UFC0 647 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 DAAM1Q9Y4D1 1078 aa7.4□□□□□ -1.22
VPS26B-204ENST00000527586 V9GY48 417 aaPredicted RBP7.4□□□□□ -1.22
VPS26B-204ENST00000527586 PRRC2CQ9Y520 2896 aaKnown RBP7.4□□□□□ -1.23
VPS26B-204ENST00000527586 SHANK1Q9Y566 2161 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 PTPRJQ12913 1337 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 CNTNAP5Q8WYK1 1306 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 MKRN2OSH3BPM6 223 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 AGRPO00253 132 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 ABL1P00519 1130 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 DNTTP04053 509 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 TYRP14679 529 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 ITIH1P19827 911 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 ACO1P21399 889 aaKnown RBP7.39□□□□□ -1.23
VPS26B-204ENST00000527586 CYP2F1P24903 491 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 ITGA3P26006 1051 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 ATP1A2P50993 1020 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 GALCP54803 685 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 RNASE9P60153 205 aaKnown RBP7.39□□□□□ -1.23
VPS26B-204ENST00000527586 SPAG1Q07617 926 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 ZNF234Q14588 700 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 INPP5JQ15735 1006 aaPredicted RBP7.39□□□□□ -1.23
VPS26B-204ENST00000527586 Q4G0T1 1027 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 PRR30Q53SZ7 412 aaPredicted RBP7.39□□□□□ -1.23
VPS26B-204ENST00000527586 ZRANB3Q5FWF4 1079 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 NUGGCQ68CJ6 796 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 NCEH1Q6PIU2 408 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 B3GNT8Q7Z7M8 397 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 RALYLQ86SE5 291 aaKnown RBP7.39□□□□□ -1.23
VPS26B-204ENST00000527586 CCDC13Q8IYE1 715 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 ADGRF2Q8IZF7 708 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 KCTD17Q8N5Z5 321 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 MFSD2AQ8NA29 543 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 USP7Q93009 1102 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 HDAC11Q96DB2 347 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 DYDC2Q96IM9 177 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 MFRPQ9BY79 579 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 STRADBQ9C0K7 418 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 CDT1Q9H211 546 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 ZSWIM4Q9H7M6 989 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 RRN3Q9NYV6 651 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 NLGN3Q9NZ94 848 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 SH3BP1Q9Y3L3 701 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 DCHS2Q6V1P9 2916 aa7.39□□□□□ -1.23
VPS26B-204ENST00000527586 ZNF469Q96JG9 3925 aaPredicted RBP7.39□□□□□ -1.23
VPS26B-204ENST00000527586 CCDC69A6NI79 296 aa7.38□□□□□ -1.23
VPS26B-204ENST00000527586 K7ESM1 405 aa7.38□□□□□ -1.23
VPS26B-204ENST00000527586 PPEF2O14830 753 aa7.38□□□□□ -1.23
VPS26B-204ENST00000527586 GRID2O43424 1007 aa7.38□□□□□ -1.23
VPS26B-204ENST00000527586 DUX1O43812 170 aa7.38□□□□□ -1.23
VPS26B-204ENST00000527586 OLFM2O95897 454 aa7.38□□□□□ -1.23
VPS26B-204ENST00000527586 CYP11A1P05108 521 aa7.38□□□□□ -1.23
VPS26B-204ENST00000527586 CAPN3P20807 821 aa7.38□□□□□ -1.23
VPS26B-204ENST00000527586 CD82P27701 267 aa7.38□□□□□ -1.23
VPS26B-204ENST00000527586 CSTF2P33240 577 aaKnown RBP eCLIP7.38□□□□□ -1.23
VPS26B-204ENST00000527586 GUCY2FP51841 1108 aa7.38□□□□□ -1.23
VPS26B-204ENST00000527586 ART1P52961 327 aa7.38□□□□□ -1.23
VPS26B-204ENST00000527586 RPS14P62263 151 aaKnown RBP7.38□□□□□ -1.23
VPS26B-204ENST00000527586 SPIDRQ14159 915 aa7.38□□□□□ -1.23
VPS26B-204ENST00000527586 FGL2Q14314 439 aa7.38□□□□□ -1.23
VPS26B-204ENST00000527586 KCNJ12Q14500 433 aa7.38□□□□□ -1.23
VPS26B-204ENST00000527586 DRAP1Q14919 205 aaPredicted RBP7.38□□□□□ -1.23
VPS26B-204ENST00000527586 ZRSR2Q15696 482 aaKnown RBP7.38□□□□□ -1.23
VPS26B-204ENST00000527586 ZNF568Q3ZCX4 644 aa7.38□□□□□ -1.23
VPS26B-204ENST00000527586 PERM1Q5SV97 790 aa7.38□□□□□ -1.23
VPS26B-204ENST00000527586 TPGS1Q6ZTW0 290 aa7.38□□□□□ -1.23
VPS26B-204ENST00000527586 METTL23Q86XA0 190 aa7.38□□□□□ -1.23
VPS26B-204ENST00000527586 TICAM2Q86XR7 235 aa7.38□□□□□ -1.23
VPS26B-204ENST00000527586 FANCBQ8NB91 859 aa7.38□□□□□ -1.23
VPS26B-204ENST00000527586 DEPTORQ8TB45 409 aa7.38□□□□□ -1.23
VPS26B-204ENST00000527586 ETNPPLQ8TBG4 499 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms