RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 C7orf61Q8IZ16 206 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 TMEM86AQ8N2M4 240 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 LRRC43Q8N309 656 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 PPM1KQ8N3J5 372 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 SPC24Q8NBT2 197 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 GSTCDQ8NEC7 633 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 APPL2Q8NEU8 664 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 HERVK_113Q902F9 699 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 SHC3Q92529 594 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 SEMA4DQ92854 862 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 VWCEQ96DN2 955 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 SCLYQ96I15 445 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 EAF1Q96JC9 268 aaPredicted RBP4.07□□□□□ -1.76
C11orf54-204ENST00000527003 ZMAT2Q96NC0 199 aaKnown RBP4.07□□□□□ -1.76
C11orf54-204ENST00000527003 SLC9A7Q96T83 725 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 BAG1Q99933 345 aaPredicted RBP4.07□□□□□ -1.76
C11orf54-204ENST00000527003 COLEC11Q9BWP8 271 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 TTYH3Q9C0H2 523 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 GANQ9H2C0 597 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 TRIT1Q9H3H1 467 aaKnown RBP4.07□□□□□ -1.76
C11orf54-204ENST00000527003 UBE2TQ9NPD8 197 aaPredicted RBP4.07□□□□□ -1.76
C11orf54-204ENST00000527003 GMIPQ9P107 970 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 DUSP13Q9UII6 198 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 SIX4Q9UIU6 781 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 DNAJC12Q9UKB3 198 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 AGAP1Q9UPQ3 857 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 CNTN6Q9UQ52 1028 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 RWDD3Q9Y3V2 267 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 HES2Q9Y543 173 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 INSL6Q9Y581 213 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 NUB1Q9Y5A7 615 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 PCDHA11Q9Y5I1 949 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 ARID2Q68CP9 1835 aa4.07□□□□□ -1.76
C11orf54-204ENST00000527003 PTPRJQ12913 1337 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 WDR81Q562E7 1941 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.06□□□□□ -1.76
C11orf54-204ENST00000527003 TBKBP1A7MCY6 615 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 F8VZ95 297 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 FOXN3O00409 490 aaPredicted RBP4.06□□□□□ -1.76
C11orf54-204ENST00000527003 PODXLO00592 558 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 RGS13O14921 159 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 SYN3O14994 580 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 MEFVO15553 781 aaPredicted RBP4.06□□□□□ -1.76
C11orf54-204ENST00000527003 ARHGAP6O43182 974 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 MED7O43513 233 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 DGKIO75912 1065 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 B3GAT3O94766 335 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 VNN1O95497 513 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 RECKO95980 971 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 POMCP01189 267 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 SERPING1P05155 500 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 PAEPP09466 180 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 ODC1P11926 461 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 LAG3P18627 525 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 TYMPP19971 482 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 ITGB8P26012 769 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 PCSK1P29120 753 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 TRHRP34981 398 aaPredicted RBP4.06□□□□□ -1.76
C11orf54-204ENST00000527003 CYLC1P35663 651 aaPredicted RBP4.06□□□□□ -1.76
C11orf54-204ENST00000527003 PPM1AP35813 382 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 PRKCIP41743 596 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 AARSP49588 968 aaKnown RBP eCLIP4.06□□□□□ -1.76
C11orf54-204ENST00000527003 FXR1P51114 621 aaKnown RBP eCLIP4.06□□□□□ -1.76
C11orf54-204ENST00000527003 SCNN1GP51170 649 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 ADKP55263 362 aaKnown RBP4.06□□□□□ -1.76
C11orf54-204ENST00000527003 JAM2P57087 298 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 SNX16P57768 344 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 WDR5P61964 334 aaKnown RBP4.06□□□□□ -1.76
C11orf54-204ENST00000527003 KRT83P78385 493 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 EGR3Q06889 387 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 DSC1Q08554 894 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 KLHL30Q0D2K2 578 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 INCA1Q0VD86 236 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 SMARCB1Q12824 385 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 LRMPQ12912 555 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 RAPGEF1Q13905 1077 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 BMS1Q14692 1282 aaKnown RBP4.06□□□□□ -1.76
C11orf54-204ENST00000527003 DRAP1Q14919 205 aaPredicted RBP4.06□□□□□ -1.76
C11orf54-204ENST00000527003 STILQ15468 1287 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 SPA17Q15506 151 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 MAPRE1Q15691 268 aaKnown RBP4.06□□□□□ -1.76
C11orf54-204ENST00000527003 NAB2Q15742 525 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 ASIC2Q16515 512 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 ZXDCQ2QGD7 858 aaPredicted RBP4.06□□□□□ -1.76
C11orf54-204ENST00000527003 GLRA4Q5JXX5 417 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 CLLU1OSQ5K130 101 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 LMBRD2Q68DH5 695 aaPredicted RBP4.06□□□□□ -1.76
C11orf54-204ENST00000527003 IQCEQ6IPM2 695 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 DPY19L2P1Q6NXN4 242 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 PDXDC1Q6P996 788 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 TRIM72Q6ZMU5 477 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 ZNF365Q70YC5 407 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 LIMS2Q7Z4I7 341 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 METTL23Q86XA0 190 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 LRRC8AQ8IWT6 810 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 COLGALT2Q8IYK4 626 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 TC2NQ8N9U0 490 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 CPLX3Q8WVH0 158 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 UBE2Q2Q8WVN8 375 aa4.06□□□□□ -1.76
C11orf54-204ENST00000527003 LINC01599Q8WXQ3 324 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms