RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 CENPTQ96BT3 561 aa3.62□□□□□ -1.83
CSDE1-209ENST00000525132 FUBP3Q96I24 572 aaKnown RBP eCLIP3.62□□□□□ -1.83
CSDE1-209ENST00000525132 NAP1L4Q99733 375 aaKnown RBP3.62□□□□□ -1.83
CSDE1-209ENST00000525132 TTPALQ9BTX7 342 aa3.62□□□□□ -1.83
CSDE1-209ENST00000525132 MENTQ9BUN1 341 aa3.62□□□□□ -1.83
CSDE1-209ENST00000525132 SARGQ9BW04 601 aa3.62□□□□□ -1.83
CSDE1-209ENST00000525132 RTEL1Q9NZ71 1219 aa3.62□□□□□ -1.83
CSDE1-209ENST00000525132 SAMD15Q9P1V8 674 aa3.62□□□□□ -1.83
CSDE1-209ENST00000525132 TAGLN3Q9UI15 199 aa3.62□□□□□ -1.83
CSDE1-209ENST00000525132 SSX2IPQ9Y2D8 614 aa3.62□□□□□ -1.83
CSDE1-209ENST00000525132 DAAM1Q9Y4D1 1078 aa3.62□□□□□ -1.83
CSDE1-209ENST00000525132 NUB1Q9Y5A7 615 aa3.62□□□□□ -1.83
CSDE1-209ENST00000525132 HIVEP2P31629 2446 aa3.62□□□□□ -1.83
CSDE1-209ENST00000525132 PRRC2AP48634 2157 aaKnown RBP3.62□□□□□ -1.83
CSDE1-209ENST00000525132 ATAD5Q96QE3 1844 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 MUC2Q02817 5179 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-209ENST00000525132 SLC12A8A0AV02 714 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 VENTXO95231 258 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 APPP05067 770 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 PF4V1P10720 104 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 CHRNB1P11230 501 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 LAMP2P13473 410 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 MC4RP32245 332 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 BUD31P41223 144 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-209ENST00000525132 MCM2P49736 904 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 DNM2P50570 870 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 IL2P60568 153 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 PFKPQ01813 784 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 ACVR2BQ13705 512 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 ABCB5Q2M3G0 1257 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 VMACQ2NL98 169 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 ARL13BQ3SXY8 428 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 COBLL1Q53SF7 1204 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 BTBD8Q5XKL5 378 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 CPZQ66K79 652 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 CC2D1AQ6P1N0 951 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-209ENST00000525132 STK32CQ86UX6 486 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 SPICE1Q8N0Z3 855 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 BCL6BQ8N143 479 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-209ENST00000525132 IGDCC4Q8TDY8 1250 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 FGF14Q92915 247 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 ZNF689Q96CS4 500 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-209ENST00000525132 FAM89AQ96GI7 184 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 C16orf92Q96LL3 132 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 CTAGE1Q96RT6 745 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 TCF25Q9BQ70 676 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 CLSTN3Q9BQT9 956 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 SPATA25Q9BR10 227 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 BOCQ9BWV1 1114 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 HAPLN2Q9GZV7 340 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 KATNBL1Q9H079 304 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 KCNH7Q9NS40 1196 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 CATSPERZQ9NTU4 200 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 TMEM74BQ9NUR3 256 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 NTMQ9P121 344 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 RCAN3Q9UKA8 241 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 ANKRD6Q9Y2G4 727 aa3.61□□□□□ -1.83
CSDE1-209ENST00000525132 RRP7AQ9Y3A4 280 aaKnown RBP3.61□□□□□ -1.83
CSDE1-209ENST00000525132 ZFC3H1O60293 1989 aaKnown RBP3.6□□□□□ -1.83
CSDE1-209ENST00000525132 C9orf118A6NHY6 69 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 ZNF891A8MT65 544 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-209ENST00000525132 FKBP9O95302 570 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 HEXAP06865 529 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 FCER1AP12319 257 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 MYL6BP14649 208 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 EPCAMP16422 314 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 EGR1P18146 543 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 KRT15P19012 456 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 HOXA5P20719 270 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 SARSP49591 514 aaKnown RBP3.6□□□□□ -1.83
CSDE1-209ENST00000525132 IL13RA1P78552 427 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 IRF9Q00978 393 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 UBE3AQ05086 875 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 FAPQ12884 760 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 TARDBPQ13148 414 aaKnown RBP eCLIP3.6□□□□□ -1.83
CSDE1-209ENST00000525132 CLCA4Q14CN2 919 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 PCBP2Q15366 365 aaKnown RBP eCLIP3.6□□□□□ -1.83
CSDE1-209ENST00000525132 PTGISQ16647 500 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 ARHGAP44Q17R89 818 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 GRAMD1BQ3KR37 738 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 ARHGAP29Q52LW3 1261 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 INO80DQ53TQ3 878 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-209ENST00000525132 MFSD14BQ5SR56 506 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 VASNQ6EMK4 673 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 HMBOX1Q6NT76 420 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 ESRP1Q6NXG1 681 aaKnown RBP3.6□□□□□ -1.83
CSDE1-209ENST00000525132 LILRA6Q6PI73 481 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 PARM1Q6UWI2 310 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 Q6ZS52 159 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 USP49Q70CQ1 688 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 FKBP9P1Q75LS8 142 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 MORC1Q86VD1 984 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 TMPRSS12Q86WS5 348 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 HEATR4Q86WZ0 1026 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 ABRAQ8N0Z2 381 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 CBARPQ8N350 705 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-209ENST00000525132 NME8Q8N427 588 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 SYT8Q8NBV8 401 aa3.6□□□□□ -1.83
CSDE1-209ENST00000525132 HDAC11Q96DB2 347 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms