RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 OVCA2Q8WZ82 227 aa12.28□□□□□ -0.44
SDCBP-211ENST00000523441 NXPE2Q96DL1 559 aa12.28□□□□□ -0.44
SDCBP-211ENST00000523441 NAF1Q96HR8 494 aaKnown RBP12.28□□□□□ -0.44
SDCBP-211ENST00000523441 NUP58Q9BVL2 599 aa12.28□□□□□ -0.44
SDCBP-211ENST00000523441 KLF16Q9BXK1 252 aaPredicted RBP12.28□□□□□ -0.44
SDCBP-211ENST00000523441 DMAP1Q9NPF5 467 aaPredicted RBP12.28□□□□□ -0.44
SDCBP-211ENST00000523441 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.28□□□□□ -0.44
SDCBP-211ENST00000523441 PANK4Q9NVE7 773 aa12.28□□□□□ -0.44
SDCBP-211ENST00000523441 SEL1LQ9UBV2 794 aa12.28□□□□□ -0.44
SDCBP-211ENST00000523441 CCDC39Q9UFE4 941 aa12.28□□□□□ -0.44
SDCBP-211ENST00000523441 CABIN1Q9Y6J0 2220 aa12.27□□□□□ -0.44
SDCBP-211ENST00000523441 FAM47DPA6NHR8 397 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 GFRA2O00451 464 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 CLIC2O15247 247 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 CYP26A1O43174 497 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 TACC1O75410 805 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 BEST1O76090 585 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 KIF20AO95235 890 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 PRKCHP24723 683 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 ADORA2BP29275 332 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 OXTRP30559 389 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 ACSL1P33121 698 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 ATP5C1P36542 298 aaKnown RBP12.27□□□□□ -0.45
SDCBP-211ENST00000523441 CCT8P50990 548 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 CYP2J2P51589 502 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 CEBPZQ03701 1054 aaKnown RBP12.27□□□□□ -0.45
SDCBP-211ENST00000523441 ZNF234Q14588 700 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 SURF1Q15526 300 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 SMAD1Q15797 465 aaKnown RBP12.27□□□□□ -0.45
SDCBP-211ENST00000523441 KCNT1Q5JUK3 1230 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 C10orf120Q5SQS8 335 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 C6orf118Q5T5N4 469 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 WDR49Q8IV35 697 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 ENGASEQ8NFI3 743 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 UCMAQ8WVF2 138 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 DNAJC19Q96DA6 116 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 P2RY11Q96G91 374 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 CLIC6Q96NY7 704 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 PRORYQ9H606 182 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 TM9SF3Q9HD45 589 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 TLR8Q9NR97 1041 aaKnown RBP12.27□□□□□ -0.45
SDCBP-211ENST00000523441 FAM49BQ9NUQ9 324 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 HSPBP1Q9NZL4 362 aa12.27□□□□□ -0.45
SDCBP-211ENST00000523441 J3QKU1 62 aa12.26□□□□□ -0.45
SDCBP-211ENST00000523441 CAPN9O14815 690 aa12.26□□□□□ -0.45
SDCBP-211ENST00000523441 GREM1O60565 184 aa12.26□□□□□ -0.45
SDCBP-211ENST00000523441 DKK1O94907 266 aa12.26□□□□□ -0.45
SDCBP-211ENST00000523441 KRT10P13645 584 aa12.26□□□□□ -0.45
SDCBP-211ENST00000523441 HNF1BP35680 557 aa12.26□□□□□ -0.45
SDCBP-211ENST00000523441 COPAP53621 1224 aa12.26□□□□□ -0.45
SDCBP-211ENST00000523441 CFHR1Q03591 330 aa12.26□□□□□ -0.45
SDCBP-211ENST00000523441 TARDBPQ13148 414 aaKnown RBP eCLIP12.26□□□□□ -0.45
SDCBP-211ENST00000523441 TAF1BQ53T94 588 aaPredicted RBP12.26□□□□□ -0.45
SDCBP-211ENST00000523441 SERPINA13PQ6UXR4 307 aa12.26□□□□□ -0.45
SDCBP-211ENST00000523441 PAQR9Q6ZVX9 377 aa12.26□□□□□ -0.45
SDCBP-211ENST00000523441 GPRIN1Q7Z2K8 1008 aa12.26□□□□□ -0.45
SDCBP-211ENST00000523441 SMARCD1Q96GM5 515 aa12.26□□□□□ -0.45
SDCBP-211ENST00000523441 SMOQ99835 787 aa12.26□□□□□ -0.45
SDCBP-211ENST00000523441 OSER1Q9NX31 292 aa12.26□□□□□ -0.45
SDCBP-211ENST00000523441 RASAL2Q9UJF2 1139 aa12.26□□□□□ -0.45
SDCBP-211ENST00000523441 DNMT3LQ9UJW3 386 aa12.26□□□□□ -0.45
SDCBP-211ENST00000523441 PCDHGB2Q9Y5G2 931 aa12.26□□□□□ -0.45
SDCBP-211ENST00000523441 CKAP5Q14008 2032 aa12.26□□□□□ -0.45
SDCBP-211ENST00000523441 NAV2Q8IVL1 2488 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 A0A1W2PQH9 124 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 TK2O00142 265 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 ENC1O14682 589 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 RARGP13631 454 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 CASP4P49662 377 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 TUBP50607 506 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 MFAP3P55082 362 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 C21orf59P57076 290 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 BIRC3Q13489 604 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 SNRNP35Q16560 246 aaKnown RBP12.25□□□□□ -0.45
SDCBP-211ENST00000523441 PTPRNQ16849 979 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 SNX30Q5VWJ9 437 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 DBX2Q6ZNG2 339 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 FUKQ8N0W3 1084 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 C1orf216Q8TAB5 229 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 SLC2A14Q8TDB8 520 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 GANCQ8TET4 914 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 BIRC7Q96CA5 298 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 CNDP2Q96KP4 475 aaKnown RBP12.25□□□□□ -0.45
SDCBP-211ENST00000523441 CGRRF1Q99675 332 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 LHX5Q9H2C1 402 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 NMUR1Q9HB89 426 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 MARK1Q9P0L2 795 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 THAP10Q9P2Z0 257 aaPredicted RBP12.25□□□□□ -0.45
SDCBP-211ENST00000523441 STK17AQ9UEE5 414 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 NAGPAQ9UK23 515 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 CLEC4EQ9ULY5 219 aa12.25□□□□□ -0.45
SDCBP-211ENST00000523441 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.24□□□□□ -0.45
SDCBP-211ENST00000523441 LDOC1O95751 146 aaPredicted RBP12.24□□□□□ -0.45
SDCBP-211ENST00000523441 ZDHHC11BP0C7U3 371 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 ACO1P21399 889 aaKnown RBP12.24□□□□□ -0.45
SDCBP-211ENST00000523441 ABCB4P21439 1286 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 TXLNAP40222 546 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 STAT6P42226 847 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 ZNF699Q32M78 642 aa12.24□□□□□ -0.45
SDCBP-211ENST00000523441 FNDC3BQ53EP0 1204 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms