RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 IARS2Q9NSE4 1012 aaKnown RBP16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 FBXO10Q9UK96 956 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 RAD54BQ9Y620 910 aa16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 SF3B1O75533 1304 aaKnown RBP eCLIP16.72■□□□□ 0.27
PCDHA3-201ENST00000522353 MAN1A2O60476 641 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 MRPS6P82932 125 aaKnown RBP16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 WDR48Q8TAF3 677 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 SUSD6Q92537 303 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 TATDN2Q93075 761 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 TMEM159Q96B96 161 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 PRKD2Q9BZL6 878 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 RMND5AQ9H871 391 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 ACOT9Q9Y305 439 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 DYNC1I2Q13409 638 aaKnown RBP16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 TMEM119Q4V9L6 283 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 LONP2Q86WA8 852 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 FIBCD1Q8N539 461 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 TMCO5AQ8N6Q1 288 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 ATG4AQ8WYN0 398 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 LENG9Q96B70 501 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 APOL2Q9BQE5 337 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 AKAP7Q9P0M2 348 aaPredicted RBP16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 WHRNQ9P202 907 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 PGK1P00558 417 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 HMGCRP04035 888 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 PDGFDQ9GZP0 370 aaPredicted RBP16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 PNMA8BQ9ULN7 279 aaPredicted RBP16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 LSP1P33241 339 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 NBPF20Q3BBV1 942 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 TRPM8Q7Z2W7 1104 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 EME1Q96AY2 570 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 CCDC134Q9H6E4 229 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 TRHDEQ9UKU6 1024 aa16.71■□□□□ 0.27
PCDHA3-201ENST00000522353 TSPAN3O60637 253 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 PPM1AP35813 382 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 BTKQ06187 659 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 CDH17Q12864 832 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 MPP3Q13368 585 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 TFAP2DQ7Z6R9 452 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 UNC93AQ86WB7 457 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 LGI2Q8N0V4 545 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 SEC16BQ96JE7 1060 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 CAMKK2Q96RR4 588 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 CAPN10Q9HC96 672 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 SPG21Q9NZD8 308 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 FZD1Q9UP38 647 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 PRKAR2AP13861 404 aaKnown RBP16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 HPGDP15428 266 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 MCOLN2Q8IZK6 566 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 FAM47E-STBD1D6RA91 191 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 TBC1D4O60343 1298 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 PRLRP16471 622 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 ZNF7P17097 686 aaPredicted RBP16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 COLGALT1Q8NBJ5 622 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 ACTL9Q8TC94 416 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 ADNPQ9H2P0 1102 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 GPAMQ9HCL2 828 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 GGT7Q9UJ14 662 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 RUVBL2Q9Y230 463 aaKnown RBP16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 MGAT4DA6NG13 374 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 LTFP02788 710 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 POLR2EP19388 210 aaKnown RBP16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 ATP5C1P36542 298 aaKnown RBP16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 RHBDL3P58872 404 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 PRKAA1Q13131 559 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 NOA1Q8NC60 698 aaKnown RBP16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 PABPC3Q9H361 631 aaKnown RBP16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 ABCC13Q9NSE7 274 aa16.7■□□□□ 0.26
PCDHA3-201ENST00000522353 PSMD12O00232 456 aaPredicted RBP16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 SCNN1GP51170 649 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 BLVRAP53004 296 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 FNDC3BQ53EP0 1204 aaKnown RBP16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 TRMT11Q7Z4G4 463 aaKnown RBP16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 HNRNPLLQ8WVV9 542 aaKnown RBP16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 KAT2BQ92831 832 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 THUMPD3Q9BV44 507 aaKnown RBP16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 POPDC2Q9HBU9 364 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 AHSPQ9NZD4 102 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 VANGL2Q9ULK5 521 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 ADGRB1O14514 1584 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 B2RBV5 119 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 MICAL2O94851 1124 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 GUCA1CO95843 209 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 APOA1P02647 267 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 RPN2P04844 631 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 SMIM10L2AP0DMW4 78 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 SMIM10L2BP0DMW5 78 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 CTNNB1P35222 781 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 C11orf63Q6NUN7 778 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 CCDC60Q8IWA6 550 aaPredicted RBP16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 THTPAQ9BU02 230 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 EVA1BQ9NVM1 165 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 KPNA3O00505 521 aaPredicted RBP16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 BDNFP23560 247 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 ACAP1Q15027 740 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 STRA8Q7Z7C7 330 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 DEFB106AQ8N104 65 aa16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 CELF6Q96J87 481 aaKnown RBP16.69■□□□□ 0.26
PCDHA3-201ENST00000522353 PNMA5Q96PV4 448 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms