RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 SNX18Q96RF0 628 aa5.94□□□□□ -1.46
SKP1-208ENST00000521216 TMEM8AQ9HCN3 771 aa5.94□□□□□ -1.46
SKP1-208ENST00000521216 ACKR2O00590 384 aa5.93□□□□□ -1.46
SKP1-208ENST00000521216 CER1O95813 267 aa5.93□□□□□ -1.46
SKP1-208ENST00000521216 MT-CO3P00414 261 aa5.93□□□□□ -1.46
SKP1-208ENST00000521216 ALADP13716 330 aa5.93□□□□□ -1.46
SKP1-208ENST00000521216 SERPINF1P36955 418 aa5.93□□□□□ -1.46
SKP1-208ENST00000521216 KCNJ12Q14500 433 aa5.93□□□□□ -1.46
SKP1-208ENST00000521216 KRT72Q14CN4 511 aa5.93□□□□□ -1.46
SKP1-208ENST00000521216 KRTAP15-1Q3LI76 137 aa5.93□□□□□ -1.46
SKP1-208ENST00000521216 TMEM65Q6PI78 240 aa5.93□□□□□ -1.46
SKP1-208ENST00000521216 PIK3AP1Q6ZUJ8 805 aa5.93□□□□□ -1.46
SKP1-208ENST00000521216 CCDC117Q8IWD4 279 aaPredicted RBP5.93□□□□□ -1.46
SKP1-208ENST00000521216 NRSN1Q8IZ57 195 aa5.93□□□□□ -1.46
SKP1-208ENST00000521216 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.93□□□□□ -1.46
SKP1-208ENST00000521216 MORC4Q8TE76 937 aa5.93□□□□□ -1.46
SKP1-208ENST00000521216 WDR60Q8WVS4 1066 aa5.93□□□□□ -1.46
SKP1-208ENST00000521216 REPS1Q96D71 796 aa5.93□□□□□ -1.46
SKP1-208ENST00000521216 PAGR1Q9BTK6 254 aa5.93□□□□□ -1.46
SKP1-208ENST00000521216 R3HDMLQ9H3Y0 253 aa5.93□□□□□ -1.46
SKP1-208ENST00000521216 PRDM13Q9H4Q3 707 aa5.93□□□□□ -1.46
SKP1-208ENST00000521216 VPS45Q9NRW7 570 aa5.93□□□□□ -1.46
SKP1-208ENST00000521216 GRHPRQ9UBQ7 328 aa5.93□□□□□ -1.46
SKP1-208ENST00000521216 COL11A2P13942 1736 aaPredicted RBP5.92□□□□□ -1.46
SKP1-208ENST00000521216 SYT5O00445 386 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 IFRD1O00458 451 aaPredicted RBP5.92□□□□□ -1.46
SKP1-208ENST00000521216 FYB1O15117 783 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 PRAMEF2O60811 474 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 C1QL1O75973 258 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 ITGA2BP08514 1039 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 ITGA5P08648 1049 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 APEHP13798 732 aaKnown RBP5.92□□□□□ -1.46
SKP1-208ENST00000521216 GALNSP34059 522 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 GPC5P78333 572 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 DNASE1L3Q13609 305 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 MFSD13AQ14CX5 517 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 TIGD6Q17RP2 521 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 TRIM71Q2Q1W2 868 aaKnown RBP5.92□□□□□ -1.46
SKP1-208ENST00000521216 ATPAF1Q5TC12 328 aaPredicted RBP5.92□□□□□ -1.46
SKP1-208ENST00000521216 FAM90A2PQ658T7 463 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 SULT6B1Q6IMI4 303 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 ERAP2Q6P179 960 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 MSANTD2Q6P1R3 559 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 KLHL17Q6TDP4 642 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 DCDC5Q6ZRR9 648 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 ADGRG3Q86Y34 549 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 CLASRPQ8N2M8 674 aaKnown RBP5.92□□□□□ -1.46
SKP1-208ENST00000521216 PNLDC1Q8NA58 520 aaKnown RBP5.92□□□□□ -1.46
SKP1-208ENST00000521216 KATNAL1Q9BW62 490 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 SORBS1Q9BX66 1292 aaKnown RBP5.92□□□□□ -1.46
SKP1-208ENST00000521216 BRD8Q9H0E9 1235 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 FBXO28Q9NVF7 368 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 ASIC5Q9NY37 505 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 C11orf21Q9P2W6 132 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 SERGEFQ9UGK8 458 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 PCDHB7Q9Y5E2 793 aa5.92□□□□□ -1.46
SKP1-208ENST00000521216 FNDC1Q4ZHG4 1894 aaPredicted RBP5.92□□□□□ -1.46
SKP1-208ENST00000521216 CLIC1O00299 241 aa5.91□□□□□ -1.46
SKP1-208ENST00000521216 CTIFO43310 598 aaKnown RBP5.91□□□□□ -1.46
SKP1-208ENST00000521216 MMP8P22894 467 aa5.91□□□□□ -1.46
SKP1-208ENST00000521216 IGHMBP2P38935 993 aaKnown RBP5.91□□□□□ -1.46
SKP1-208ENST00000521216 RAE1P78406 368 aaKnown RBP5.91□□□□□ -1.46
SKP1-208ENST00000521216 CFHR3Q02985 330 aa5.91□□□□□ -1.46
SKP1-208ENST00000521216 BTBD16Q32M84 506 aa5.91□□□□□ -1.46
SKP1-208ENST00000521216 AWAT1Q58HT5 328 aa5.91□□□□□ -1.46
SKP1-208ENST00000521216 PRAMEF17Q5VTA0 474 aa5.91□□□□□ -1.46
SKP1-208ENST00000521216 FCRLBQ6BAA4 426 aa5.91□□□□□ -1.46
SKP1-208ENST00000521216 CACNA2D3Q8IZS8 1091 aa5.91□□□□□ -1.46
SKP1-208ENST00000521216 OR1N1Q8NGS0 311 aa5.91□□□□□ -1.46
SKP1-208ENST00000521216 ADAMTS18Q8TE60 1221 aa5.91□□□□□ -1.46
SKP1-208ENST00000521216 SLC22A17Q8WUG5 538 aa5.91□□□□□ -1.46
SKP1-208ENST00000521216 OVCA2Q8WZ82 227 aa5.91□□□□□ -1.46
SKP1-208ENST00000521216 MCRS1Q96EZ8 462 aa5.91□□□□□ -1.46
SKP1-208ENST00000521216 EDC3Q96F86 508 aaKnown RBP5.91□□□□□ -1.46
SKP1-208ENST00000521216 FYTTD1Q96QD9 318 aaKnown RBP5.91□□□□□ -1.46
SKP1-208ENST00000521216 ADGRE3Q9BY15 652 aa5.91□□□□□ -1.46
SKP1-208ENST00000521216 MAGEH1Q9H213 219 aa5.91□□□□□ -1.46
SKP1-208ENST00000521216 HERC5Q9UII4 1024 aaKnown RBP5.91□□□□□ -1.46
SKP1-208ENST00000521216 MORC2Q9Y6X9 1032 aaPredicted RBP5.91□□□□□ -1.46
SKP1-208ENST00000521216 CCDC187A0A096LP49 1063 aa5.9□□□□□ -1.46
SKP1-208ENST00000521216 KIF28PB7ZC32 967 aa5.9□□□□□ -1.46
SKP1-208ENST00000521216 UBE2Q2LH0YL09 131 aa5.9□□□□□ -1.46
SKP1-208ENST00000521216 H7C1Q1 480 aa5.9□□□□□ -1.46
SKP1-208ENST00000521216 RPP40O75818 363 aaKnown RBP5.9□□□□□ -1.46
SKP1-208ENST00000521216 ACTL6BO94805 426 aa5.9□□□□□ -1.46
SKP1-208ENST00000521216 C1RP00736 705 aa5.9□□□□□ -1.46
SKP1-208ENST00000521216 NHLRC4P0CG21 123 aaPredicted RBP5.9□□□□□ -1.46
SKP1-208ENST00000521216 JAK3P52333 1124 aa5.9□□□□□ -1.46
SKP1-208ENST00000521216 INHBEP58166 350 aa5.9□□□□□ -1.46
SKP1-208ENST00000521216 KCNB1Q14721 858 aa5.9□□□□□ -1.46
SKP1-208ENST00000521216 FAM187BQ17R55 369 aa5.9□□□□□ -1.46
SKP1-208ENST00000521216 ZNF569Q5MCW4 686 aa5.9□□□□□ -1.46
SKP1-208ENST00000521216 CC2D1BQ5T0F9 858 aaKnown RBP5.9□□□□□ -1.46
SKP1-208ENST00000521216 ANKRD40Q6AI12 368 aa5.9□□□□□ -1.46
SKP1-208ENST00000521216 CHSY1Q86X52 802 aa5.9□□□□□ -1.46
SKP1-208ENST00000521216 C16orf71Q8IYS4 520 aaPredicted RBP5.9□□□□□ -1.46
SKP1-208ENST00000521216 FAM98AQ8NCA5 519 aaKnown RBP5.9□□□□□ -1.46
SKP1-208ENST00000521216 RUBCNQ92622 972 aa5.9□□□□□ -1.46
SKP1-208ENST00000521216 NELL1Q92832 810 aa5.9□□□□□ -1.46
SKP1-208ENST00000521216 RTKNQ9BST9 563 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms