RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 PFKFB1P16118 471 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 YWHAQP27348 245 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 DLG4P78352 724 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 SFSWAPQ12872 951 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 BIRC3Q13489 604 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 DMC1Q14565 340 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 DHCR24Q15392 516 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 ZNF699Q32M78 642 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 ZACNQ401N2 412 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 ZNF667Q5HYK9 610 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 C1orf220Q5T0J3 134 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 SV2AQ7L0J3 742 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 FILIP1Q7Z7B0 1213 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 SCAMP5Q8TAC9 235 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 USP33Q8TEY7 942 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 CHAMP1Q96JM3 812 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 ZC3H10Q96K80 434 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 HHIPQ96QV1 700 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 KCNK16Q96T55 309 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 NUCKS1Q9H1E3 243 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 EXOC1Q9NV70 894 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 SMPD4Q9NXE4 827 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 CHORDC1Q9UHD1 332 aaPredicted RBP9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 ZDHHC9Q9Y397 364 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 PCDHGC4Q9Y5F7 938 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 TPRP12270 2363 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 MIA3Q5JRA6 1907 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 SDK1Q7Z5N4 2213 aa9.83□□□□□ -0.84
CTNNA1-221ENST00000520339 DNAH14Q0VDD8 3507 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 TSC2P49815 1807 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 FAM92AA1XBS5 289 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 SLC9A3R1O14745 358 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 IKBKBO14920 756 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 FOXD2O60548 495 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 SASH3O75995 380 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 RTN3O95197 1032 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 EPN2O95208 641 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 APBB3O95704 486 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 RPN1P04843 607 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 CYP17A1P05093 508 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 MYL1P05976 194 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 ZDHHC11BP0C7U3 371 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 GNA15P30679 374 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 SLC6A11P48066 632 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 SGSM1Q2NKQ1 1148 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 PLK5Q496M5 336 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 SNX30Q5VWJ9 437 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 RHBDF2Q6PJF5 856 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 FAM35AQ86V20 835 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 FUKQ8N0W3 1084 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 CRYBG2Q8N1P7 616 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 ZMIZ2Q8NF64 920 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 CCDC26Q8TAB7 109 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 OVCA2Q8WZ82 227 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 FBXO32Q969P5 355 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 ACDQ96AP0 544 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 CCDC74AQ96AQ1 378 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 TNIP3Q96KP6 325 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 SLITRK1Q96PX8 696 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 ARRDC1-AS1Q9H2J1 176 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 COMMD8Q9NX08 183 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 CFAP97Q9P2B7 532 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 EBF1Q9UH73 591 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 TRAF3IP3Q9Y228 551 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 ATP8B3O60423 1300 aa9.82□□□□□ -0.84
CTNNA1-221ENST00000520339 ANK1P16157 1881 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 A0A0A0MRY4 1105 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 E2F8A0AVK6 867 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 SCAMP3O14828 347 aaKnown RBP9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 DCLK1O15075 740 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 MAPK13O15264 365 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 COCHO43405 550 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 ASS1P00966 412 aaKnown RBP9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 THBS1P07996 1170 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 ZNF806P0C7X5 589 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 FAM157BP0CG42 384 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 CCDC192P0DO97 292 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 MBL2P11226 248 aaPredicted RBP9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 P4HA1P13674 534 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 SYKP43405 635 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 NDUFA8P51970 172 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 SLC5A3P53794 718 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 MESP2Q0VG99 397 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 IFRD2Q12894 506 aaPredicted RBP9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 SF3A2Q15428 464 aaKnown RBP9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 DBN1Q16643 649 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 NFIL3Q16649 462 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 HECTD3Q5T447 861 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 TTC39BQ5VTQ0 682 aaPredicted RBP9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 SCARA5Q6ZMJ2 495 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 ACOT1Q86TX2 421 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 UNC93AQ86WB7 457 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 DDX42Q86XP3 938 aaKnown RBP eCLIP9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 PDZD8Q8NEN9 1154 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 TAF4BQ92750 862 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 SMARCD1Q96GM5 515 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 SPATA32Q96LK8 384 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 SMOQ99835 787 aa9.81□□□□□ -0.84
CTNNA1-221ENST00000520339 MED10Q9BTT4 135 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms