RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 GDF15Q99988 308 aa4.36□□□□□ -1.71
SKP1-205ENST00000519054 FAM118BQ9BPY3 351 aa4.36□□□□□ -1.71
SKP1-205ENST00000519054 ADGRE3Q9BY15 652 aa4.36□□□□□ -1.71
SKP1-205ENST00000519054 RGL1Q9NZL6 768 aa4.36□□□□□ -1.71
SKP1-205ENST00000519054 PCDHGB2Q9Y5G2 931 aa4.36□□□□□ -1.71
SKP1-205ENST00000519054 CYP2D7A0A087X1C5 515 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 INO80B-WBP1J3KQ70 363 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 PODXLO00592 558 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 BCAR3O75815 825 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 VIPP01282 170 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 MBPP02686 304 aaPredicted RBP4.35□□□□□ -1.71
SKP1-205ENST00000519054 SRGAP2BP0DMP2 458 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 ATP5F1P24539 256 aaPredicted RBP4.35□□□□□ -1.71
SKP1-205ENST00000519054 DGKQP52824 942 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 ATP1A4Q13733 1029 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 KCNJ12Q14500 433 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 KPNB1Q14974 876 aaKnown RBP4.35□□□□□ -1.71
SKP1-205ENST00000519054 ETFDHQ16134 617 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 SLC5A9Q2M3M2 681 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 P3H1Q32P28 736 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 MAP9Q49MG5 647 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 TMTC4Q5T4D3 741 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 CCDC181Q5TID7 509 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 CCSAPQ6IQ19 270 aaPredicted RBP4.35□□□□□ -1.71
SKP1-205ENST00000519054 SRLQ86TD4 932 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 ZNF398Q8TD17 642 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 SMG7Q92540 1137 aaKnown RBP4.35□□□□□ -1.71
SKP1-205ENST00000519054 MAP4K1Q92918 833 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 RPL36ALQ969Q0 106 aaKnown RBP4.35□□□□□ -1.71
SKP1-205ENST00000519054 KIAA1191Q96A73 305 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 HIC2Q96JB3 615 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 TNIP3Q96KP6 325 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 MYD88Q99836 296 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 C1QTNF7Q9BXJ2 289 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 EIF2AQ9BY44 585 aaKnown RBP4.35□□□□□ -1.71
SKP1-205ENST00000519054 BTBD3Q9Y2F9 522 aa4.35□□□□□ -1.71
SKP1-205ENST00000519054 FCHO1O14526 889 aa4.34□□□□□ -1.71
SKP1-205ENST00000519054 TP73O15350 636 aa4.34□□□□□ -1.71
SKP1-205ENST00000519054 HSPA7P48741 367 aa4.34□□□□□ -1.71
SKP1-205ENST00000519054 JAK3P52333 1124 aa4.34□□□□□ -1.71
SKP1-205ENST00000519054 WDR5P61964 334 aaKnown RBP4.34□□□□□ -1.71
SKP1-205ENST00000519054 YPEL5P62699 121 aa4.34□□□□□ -1.71
SKP1-205ENST00000519054 MAPKAPK3Q16644 382 aa4.34□□□□□ -1.71
SKP1-205ENST00000519054 PFKFB3Q16875 520 aaPredicted RBP4.34□□□□□ -1.71
SKP1-205ENST00000519054 MPEG1Q2M385 716 aa4.34□□□□□ -1.71
SKP1-205ENST00000519054 Q4G0T1 1027 aa4.34□□□□□ -1.71
SKP1-205ENST00000519054 MEX3CQ5U5Q3 659 aaKnown RBP4.34□□□□□ -1.71
SKP1-205ENST00000519054 FAM90A2PQ658T7 463 aa4.34□□□□□ -1.71
SKP1-205ENST00000519054 C1QL2Q7Z5L3 287 aa4.34□□□□□ -1.71
SKP1-205ENST00000519054 KRT73Q86Y46 540 aa4.34□□□□□ -1.71
SKP1-205ENST00000519054 PRSS3P2Q8NHM4 247 aa4.34□□□□□ -1.71
SKP1-205ENST00000519054 DENND1AQ8TEH3 1009 aa4.34□□□□□ -1.71
SKP1-205ENST00000519054 MAFFQ9ULX9 164 aa4.34□□□□□ -1.71
SKP1-205ENST00000519054 OR2W5A6NFC9 320 aa4.33□□□□□ -1.72
SKP1-205ENST00000519054 E5RJQ4 531 aa4.33□□□□□ -1.72
SKP1-205ENST00000519054 ALADP13716 330 aa4.33□□□□□ -1.72
SKP1-205ENST00000519054 ABCB4P21439 1286 aa4.33□□□□□ -1.72
SKP1-205ENST00000519054 MMP13P45452 471 aa4.33□□□□□ -1.72
SKP1-205ENST00000519054 GSTM5P46439 218 aa4.33□□□□□ -1.72
SKP1-205ENST00000519054 GHRHRQ02643 423 aa4.33□□□□□ -1.72
SKP1-205ENST00000519054 NSUN2Q08J23 767 aaKnown RBP eCLIP4.33□□□□□ -1.72
SKP1-205ENST00000519054 SEMA3BQ13214 749 aa4.33□□□□□ -1.72
SKP1-205ENST00000519054 ZNF425Q6IV72 752 aa4.33□□□□□ -1.72
SKP1-205ENST00000519054 C18orf8Q96DM3 657 aa4.33□□□□□ -1.72
SKP1-205ENST00000519054 SGCZQ96LD1 299 aa4.33□□□□□ -1.72
SKP1-205ENST00000519054 EIF3CQ99613 913 aaKnown RBP4.33□□□□□ -1.72
SKP1-205ENST00000519054 SPRTNQ9H040 489 aaPredicted RBP4.33□□□□□ -1.72
SKP1-205ENST00000519054 NUAK2Q9H093 628 aa4.33□□□□□ -1.72
SKP1-205ENST00000519054 TMEM8AQ9HCN3 771 aa4.33□□□□□ -1.72
SKP1-205ENST00000519054 ABHD10Q9NUJ1 306 aa4.33□□□□□ -1.72
SKP1-205ENST00000519054 ARL8BQ9NVJ2 186 aa4.33□□□□□ -1.72
SKP1-205ENST00000519054 ADAM10O14672 748 aa4.32□□□□□ -1.72
SKP1-205ENST00000519054 TOP3BO95985 862 aaKnown RBP4.32□□□□□ -1.72
SKP1-205ENST00000519054 TACR3P29371 465 aa4.32□□□□□ -1.72
SKP1-205ENST00000519054 IGHMBP2P38935 993 aaKnown RBP4.32□□□□□ -1.72
SKP1-205ENST00000519054 VPS41P49754 854 aa4.32□□□□□ -1.72
SKP1-205ENST00000519054 ELF2Q15723 593 aa4.32□□□□□ -1.72
SKP1-205ENST00000519054 RAB30Q15771 203 aa4.32□□□□□ -1.72
SKP1-205ENST00000519054 CNGA3Q16281 694 aa4.32□□□□□ -1.72
SKP1-205ENST00000519054 CCDC144NLQ6NUI1 221 aa4.32□□□□□ -1.72
SKP1-205ENST00000519054 TLDC1Q6P9B6 456 aa4.32□□□□□ -1.72
SKP1-205ENST00000519054 PIK3AP1Q6ZUJ8 805 aa4.32□□□□□ -1.72
SKP1-205ENST00000519054 RASGRP3Q8IV61 690 aa4.32□□□□□ -1.72
SKP1-205ENST00000519054 CCDC146Q8IYE0 955 aa4.32□□□□□ -1.72
SKP1-205ENST00000519054 FAM186BQ8IYM0 893 aa4.32□□□□□ -1.72
SKP1-205ENST00000519054 CLASRPQ8N2M8 674 aaKnown RBP4.32□□□□□ -1.72
SKP1-205ENST00000519054 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.32□□□□□ -1.72
SKP1-205ENST00000519054 DEPTORQ8TB45 409 aa4.32□□□□□ -1.72
SKP1-205ENST00000519054 IPO4Q8TEX9 1081 aaKnown RBP4.32□□□□□ -1.72
SKP1-205ENST00000519054 CUL5Q93034 780 aa4.32□□□□□ -1.72
SKP1-205ENST00000519054 VPS16Q9H269 839 aa4.32□□□□□ -1.72
SKP1-205ENST00000519054 EPS8L2Q9H6S3 715 aa4.32□□□□□ -1.72
SKP1-205ENST00000519054 CHST12Q9NRB3 414 aa4.32□□□□□ -1.72
SKP1-205ENST00000519054 TRNAU1APQ9NX07 287 aaKnown RBP4.32□□□□□ -1.72
SKP1-205ENST00000519054 SEMA5BQ9P283 1151 aa4.32□□□□□ -1.72
SKP1-205ENST00000519054 SLC39A10Q9ULF5 831 aa4.32□□□□□ -1.72
SKP1-205ENST00000519054 HEMK1Q9Y5R4 338 aaPredicted RBP4.32□□□□□ -1.72
SKP1-205ENST00000519054 SPATA31A1Q5TZJ5 1347 aa4.31□□□□□ -1.72
SKP1-205ENST00000519054 CCDC187A0A096LP49 1063 aa4.31□□□□□ -1.72
SKP1-205ENST00000519054 C16orf96A6NNT2 1141 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms