RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	AXIN1	O15169	862 aa		25.27	■■□□□ 1.64
CNOT7-204	ENST00000518885	RPP40	O75818	363 aa	Known RBP	25.27	■■□□□ 1.64
CNOT7-204	ENST00000518885	LATS1	O95835	1130 aa		25.27	■■□□□ 1.64
CNOT7-204	ENST00000518885	LTF	P02788	710 aa		25.27	■■□□□ 1.64
CNOT7-204	ENST00000518885	GPD2	P43304	727 aa		25.27	■■□□□ 1.64
CNOT7-204	ENST00000518885	BPIFB4	P59827	614 aa		25.27	■■□□□ 1.64
CNOT7-204	ENST00000518885	TCP11X2	Q5H9J9	407 aa		25.27	■■□□□ 1.64
CNOT7-204	ENST00000518885	C10orf76	Q5T2E6	689 aa		25.27	■■□□□ 1.64
CNOT7-204	ENST00000518885	BHLHA9	Q7RTU4	235 aa		25.27	■■□□□ 1.64
CNOT7-204	ENST00000518885	ANKRD20A12P	Q8NF67	263 aa		25.27	■■□□□ 1.64
CNOT7-204	ENST00000518885	GAB3	Q8WWW8	586 aa		25.27	■■□□□ 1.64
CNOT7-204	ENST00000518885	ZNF606	Q8WXB4	792 aa		25.27	■■□□□ 1.64
CNOT7-204	ENST00000518885	SHC3	Q92529	594 aa		25.27	■■□□□ 1.64
CNOT7-204	ENST00000518885	EDEM1	Q92611	657 aa		25.27	■■□□□ 1.64
CNOT7-204	ENST00000518885	NOX5	Q96PH1	765 aa		25.27	■■□□□ 1.64
CNOT7-204	ENST00000518885	HHIP	Q96QV1	700 aa		25.27	■■□□□ 1.64
CNOT7-204	ENST00000518885	ZSWIM1	Q9BR11	485 aa		25.27	■■□□□ 1.64
CNOT7-204	ENST00000518885	POLM	Q9NP87	494 aa	Predicted RBP	25.27	■■□□□ 1.64
CNOT7-204	ENST00000518885	WDR87	Q6ZQQ6	2873 aa		25.26	■■□□□ 1.63
CNOT7-204	ENST00000518885	DGKG	P49619	791 aa		25.26	■■□□□ 1.63
CNOT7-204	ENST00000518885	TRIP4	Q15650	581 aa	Predicted RBP	25.26	■■□□□ 1.63
CNOT7-204	ENST00000518885	SDE2	Q6IQ49	451 aa		25.26	■■□□□ 1.63
CNOT7-204	ENST00000518885	C11orf74	Q86VG3	221 aa		25.26	■■□□□ 1.63
CNOT7-204	ENST00000518885	DENND1C	Q8IV53	801 aa		25.26	■■□□□ 1.63
CNOT7-204	ENST00000518885	CPXM2	Q8N436	756 aa		25.26	■■□□□ 1.63
CNOT7-204	ENST00000518885	NDRG1	Q92597	394 aa	Known RBP	25.26	■■□□□ 1.63
CNOT7-204	ENST00000518885	DNAJC12	Q9UKB3	198 aa		25.26	■■□□□ 1.63
CNOT7-204	ENST00000518885	AGO1	Q9UL18	857 aa	Known RBP	25.26	■■□□□ 1.63
CNOT7-204	ENST00000518885	CEP83	Q9Y592	693 aa		25.26	■■□□□ 1.63
CNOT7-204	ENST00000518885	ZBTB24	O43167	697 aa	Predicted RBP	25.25	■■□□□ 1.63
CNOT7-204	ENST00000518885	HR	O43593	1189 aa		25.25	■■□□□ 1.63
CNOT7-204	ENST00000518885	TIE1	P35590	1138 aa		25.25	■■□□□ 1.63
CNOT7-204	ENST00000518885	STX1A	Q16623	288 aa		25.25	■■□□□ 1.63
CNOT7-204	ENST00000518885	HSP90AA4P	Q58FG1	418 aa		25.25	■■□□□ 1.63
CNOT7-204	ENST00000518885	CCDC183	Q5T5S1	534 aa		25.25	■■□□□ 1.63
CNOT7-204	ENST00000518885	NUGGC	Q68CJ6	796 aa		25.25	■■□□□ 1.63
CNOT7-204	ENST00000518885	MSANTD2	Q6P1R3	559 aa		25.25	■■□□□ 1.63
CNOT7-204	ENST00000518885	GJB7	Q6PEY0	223 aa		25.25	■■□□□ 1.63
CNOT7-204	ENST00000518885	CACNA2D4	Q7Z3S7	1137 aa		25.25	■■□□□ 1.63
CNOT7-204	ENST00000518885	UNC45B	Q8IWX7	931 aa		25.25	■■□□□ 1.63
CNOT7-204	ENST00000518885	PHTF2	Q8N3S3	785 aa		25.25	■■□□□ 1.63
CNOT7-204	ENST00000518885	MIS12	Q9H081	205 aa		25.25	■■□□□ 1.63
CNOT7-204	ENST00000518885	STARD13	Q9Y3M8	1113 aa		25.25	■■□□□ 1.63
CNOT7-204	ENST00000518885	RIF1	Q5UIP0	2472 aa	Known RBP	25.25	■■□□□ 1.63
CNOT7-204	ENST00000518885	PIK3R2	O00459	728 aa		25.24	■■□□□ 1.63
CNOT7-204	ENST00000518885	LRP3	O75074	770 aa		25.24	■■□□□ 1.63
CNOT7-204	ENST00000518885	KLF8	O95600	359 aa	Predicted RBP	25.24	■■□□□ 1.63
CNOT7-204	ENST00000518885	KLKB1	P03952	638 aa		25.24	■■□□□ 1.63
CNOT7-204	ENST00000518885	RET	P07949	1114 aa		25.24	■■□□□ 1.63
CNOT7-204	ENST00000518885	KRT9	P35527	623 aa		25.24	■■□□□ 1.63
CNOT7-204	ENST00000518885	RPL34	P49207	117 aa	Known RBP	25.24	■■□□□ 1.63
CNOT7-204	ENST00000518885	CRY1	Q16526	586 aa		25.24	■■□□□ 1.63
CNOT7-204	ENST00000518885	MIIP	Q5JXC2	388 aa		25.24	■■□□□ 1.63
CNOT7-204	ENST00000518885	CCDC33	Q8N5R6	958 aa		25.24	■■□□□ 1.63
CNOT7-204	ENST00000518885	ALLC	Q8N6M5	410 aa		25.24	■■□□□ 1.63
CNOT7-204	ENST00000518885	ZNF513	Q8N8E2	541 aa	Predicted RBP	25.24	■■□□□ 1.63
CNOT7-204	ENST00000518885	TXNDC5	Q8NBS9	432 aa	Known RBP	25.24	■■□□□ 1.63
CNOT7-204	ENST00000518885	IRX2	Q9BZI1	471 aa	Predicted RBP	25.24	■■□□□ 1.63
CNOT7-204	ENST00000518885	SAMSN1	Q9NSI8	373 aa	Known RBP	25.24	■■□□□ 1.63
CNOT7-204	ENST00000518885	FRYL	O94915	3013 aa		25.24	■■□□□ 1.63
CNOT7-204	ENST00000518885	CAPN9	O14815	690 aa		25.23	■■□□□ 1.63
CNOT7-204	ENST00000518885	FOXD2	O60548	495 aa	Predicted RBP	25.23	■■□□□ 1.63
CNOT7-204	ENST00000518885	PENK	P01210	267 aa	Predicted RBP	25.23	■■□□□ 1.63
CNOT7-204	ENST00000518885	CALCA	P01258	141 aa		25.23	■■□□□ 1.63
CNOT7-204	ENST00000518885	NCAM1	P13591	858 aa		25.23	■■□□□ 1.63
CNOT7-204	ENST00000518885	KIR2DL1	P43626	348 aa	Predicted RBP	25.23	■■□□□ 1.63
CNOT7-204	ENST00000518885	PXN	P49023	591 aa	Predicted RBP	25.23	■■□□□ 1.63
CNOT7-204	ENST00000518885	MPPE1	Q53F39	396 aa		25.23	■■□□□ 1.63
CNOT7-204	ENST00000518885	DENND1B	Q6P3S1	775 aa		25.23	■■□□□ 1.63
CNOT7-204	ENST00000518885	BEND5	Q7L4P6	421 aa		25.23	■■□□□ 1.63
CNOT7-204	ENST00000518885	SCUBE3	Q8IX30	993 aa		25.23	■■□□□ 1.63
CNOT7-204	ENST00000518885	IL17RC	Q8NAC3	791 aa		25.23	■■□□□ 1.63
CNOT7-204	ENST00000518885	FAM149B1	Q96BN6	582 aa		25.23	■■□□□ 1.63
CNOT7-204	ENST00000518885	SERPINB11	Q96P15	392 aa		25.23	■■□□□ 1.63
CNOT7-204	ENST00000518885	SLC4A5	Q9BY07	1137 aa		25.23	■■□□□ 1.63
CNOT7-204	ENST00000518885	SLC2A11	Q9BYW1	496 aa		25.23	■■□□□ 1.63
CNOT7-204	ENST00000518885	SFMBT1	Q9UHJ3	866 aa		25.23	■■□□□ 1.63
CNOT7-204	ENST00000518885	PCDHGC3	Q9UN70	934 aa		25.23	■■□□□ 1.63
CNOT7-204	ENST00000518885	KIAA1549L	Q6ZVL6	1849 aa		25.23	■■□□□ 1.63
CNOT7-204	ENST00000518885	FAM186A	A6NE01	2351 aa		25.23	■■□□□ 1.63
CNOT7-204	ENST00000518885	ZNF292	O60281	2723 aa		25.22	■■□□□ 1.63
CNOT7-204	ENST00000518885	BECN2	A8MW95	431 aa		25.22	■■□□□ 1.63
CNOT7-204	ENST00000518885	SLC11A2	P49281	568 aa		25.22	■■□□□ 1.63
CNOT7-204	ENST00000518885	RING1	Q06587	406 aa		25.22	■■□□□ 1.63
CNOT7-204	ENST00000518885	USP39	Q53GS9	565 aa	Known RBP	25.22	■■□□□ 1.63
CNOT7-204	ENST00000518885	FKBP15	Q5T1M5	1219 aa		25.22	■■□□□ 1.63
CNOT7-204	ENST00000518885	FAM217A	Q8IXS0	508 aa		25.22	■■□□□ 1.63
CNOT7-204	ENST00000518885	DDI1	Q8WTU0	396 aa		25.22	■■□□□ 1.63
CNOT7-204	ENST00000518885	BHMT	Q93088	406 aa		25.22	■■□□□ 1.63
CNOT7-204	ENST00000518885	LOXL4	Q96JB6	756 aa		25.22	■■□□□ 1.63
CNOT7-204	ENST00000518885	DDX50	Q9BQ39	737 aa	Known RBP	25.22	■■□□□ 1.63
CNOT7-204	ENST00000518885	NAT10	Q9H0A0	1025 aa	Known RBP	25.22	■■□□□ 1.63
CNOT7-204	ENST00000518885	SIX2	Q9NPC8	291 aa		25.22	■■□□□ 1.63
CNOT7-204	ENST00000518885	SLC27A6	Q9Y2P4	619 aa		25.22	■■□□□ 1.63
CNOT7-204	ENST00000518885	NPC1	O15118	1278 aa		25.21	■■□□□ 1.63
CNOT7-204	ENST00000518885	NNT	Q13423	1086 aa		25.21	■■□□□ 1.63
CNOT7-204	ENST00000518885	BYSL	Q13895	437 aa	Known RBP	25.21	■■□□□ 1.63
CNOT7-204	ENST00000518885	RAPGEF1	Q13905	1077 aa		25.21	■■□□□ 1.63
CNOT7-204	ENST00000518885	ELF2	Q15723	593 aa		25.21	■■□□□ 1.63
CNOT7-204	ENST00000518885	LPAL2	Q16609	132 aa		25.21	■■□□□ 1.63

Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms