RNA–Protein interactions for RNA: ENST00000517654.5

FAM49B-202, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49B, Length 1,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-202ENST00000517654 ZNF840PA6NDX5 716 aa17.3■□□□□ 0.36
FAM49B-202ENST00000517654 ZRANB2O95218 330 aaKnown RBP eCLIP17.3■□□□□ 0.36
FAM49B-202ENST00000517654 SLU7O95391 586 aaKnown RBP17.3■□□□□ 0.36
FAM49B-202ENST00000517654 RALAP11233 206 aa17.3■□□□□ 0.36
FAM49B-202ENST00000517654 KDELR1P24390 212 aa17.3■□□□□ 0.36
FAM49B-202ENST00000517654 IL4RP24394 825 aa17.3■□□□□ 0.36
FAM49B-202ENST00000517654 GTF2F1P35269 517 aaKnown RBP eCLIP17.3■□□□□ 0.36
FAM49B-202ENST00000517654 CXCR3P49682 368 aa17.3■□□□□ 0.36
FAM49B-202ENST00000517654 NAA30Q147X3 362 aaPredicted RBP17.3■□□□□ 0.36
FAM49B-202ENST00000517654 HADHQ16836 314 aaKnown RBP17.3■□□□□ 0.36
FAM49B-202ENST00000517654 ARTNQ5T4W7 220 aa17.3■□□□□ 0.36
FAM49B-202ENST00000517654 SPOCD1Q6ZMY3 1216 aa17.3■□□□□ 0.36
FAM49B-202ENST00000517654 SLC13A5Q86YT5 568 aaPredicted RBP17.3■□□□□ 0.36
FAM49B-202ENST00000517654 VN1R2Q8NFZ6 395 aa17.3■□□□□ 0.36
FAM49B-202ENST00000517654 AP1M1Q9BXS5 423 aa17.3■□□□□ 0.36
FAM49B-202ENST00000517654 MAN1C1Q9NR34 630 aa17.3■□□□□ 0.36
FAM49B-202ENST00000517654 TLR8Q9NR97 1041 aaKnown RBP17.3■□□□□ 0.36
FAM49B-202ENST00000517654 RBM12Q9NTZ6 932 aaKnown RBP17.3■□□□□ 0.36
FAM49B-202ENST00000517654 FZD10Q9ULW2 581 aa17.3■□□□□ 0.36
FAM49B-202ENST00000517654 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.3■□□□□ 0.36
FAM49B-202ENST00000517654 SNX10Q9Y5X0 201 aa17.3■□□□□ 0.36
FAM49B-202ENST00000517654 DENND4CQ5VZ89 1909 aa17.3■□□□□ 0.36
FAM49B-202ENST00000517654 NOTCH4Q99466 2003 aa17.29■□□□□ 0.36
FAM49B-202ENST00000517654 PGRMC1O00264 195 aaKnown RBP17.29■□□□□ 0.36
FAM49B-202ENST00000517654 CCL16O15467 120 aa17.29■□□□□ 0.36
FAM49B-202ENST00000517654 F11P03951 625 aa17.29■□□□□ 0.36
FAM49B-202ENST00000517654 KRT7P08729 469 aa17.29■□□□□ 0.36
FAM49B-202ENST00000517654 EPHB3P54753 998 aa17.29■□□□□ 0.36
FAM49B-202ENST00000517654 SNX30Q5VWJ9 437 aa17.29■□□□□ 0.36
FAM49B-202ENST00000517654 SPATA4Q8NEY3 305 aa17.29■□□□□ 0.36
FAM49B-202ENST00000517654 FAM71BQ8TC56 605 aa17.29■□□□□ 0.36
FAM49B-202ENST00000517654 UBE2Q2Q8WVN8 375 aa17.29■□□□□ 0.36
FAM49B-202ENST00000517654 TIFAQ96CG3 184 aa17.29■□□□□ 0.36
FAM49B-202ENST00000517654 KCTD15Q96SI1 283 aaPredicted RBP17.29■□□□□ 0.36
FAM49B-202ENST00000517654 PCDH18Q9HCL0 1135 aa17.29■□□□□ 0.36
FAM49B-202ENST00000517654 HCFC1R1Q9NWW0 138 aa17.29■□□□□ 0.36
FAM49B-202ENST00000517654 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.29■□□□□ 0.363e-7■■■■□ 25.1
FAM49B-202ENST00000517654 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.29■□□□□ 0.36
FAM49B-202ENST00000517654 V9GYY5 206 aaPredicted RBP17.29■□□□□ 0.36
FAM49B-202ENST00000517654 hCG_1818297A0A087WSY0 165 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 C2orf78A6NCI8 922 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 L1CAMP32004 1257 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 EFEMP1Q12805 493 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 KLF1Q13351 362 aaPredicted RBP17.28■□□□□ 0.36
FAM49B-202ENST00000517654 DPYSL3Q14195 570 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 ERMARDQ5T6L9 678 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 SEL1L2Q5TEA6 688 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 CCDC50Q8IVM0 306 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 RCOR2Q8IZ40 523 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 ARHGAP18Q8N392 663 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 TEKT4Q8WW24 435 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 DDX56Q9NY93 547 aaKnown RBP17.28■□□□□ 0.36
FAM49B-202ENST00000517654 RRN3Q9NYV6 651 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 XPO7Q9UIA9 1087 aaKnown RBP17.28■□□□□ 0.36
FAM49B-202ENST00000517654 AP4E1Q9UPM8 1137 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 HCFC2Q9Y5Z7 792 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 FAM72CH0Y354 149 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 TLR5O60602 858 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 GGCXP38435 758 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 CDH6P55285 790 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 VEPH1Q14D04 833 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 LONRF2Q1L5Z9 754 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 BOLA3Q53S33 107 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 CCDC181Q5TID7 509 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 FAM72AQ5TYM5 149 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 FAM72DQ6L9T8 149 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 GAREM2Q75VX8 874 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 FAM72BQ86X60 149 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 TSC1Q92574 1164 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 SLC39A13Q96H72 371 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 ZNF512Q96ME7 567 aaPredicted RBP17.28■□□□□ 0.36
FAM49B-202ENST00000517654 OSBPL8Q9BZF1 889 aa17.28■□□□□ 0.36
FAM49B-202ENST00000517654 R3HDM2Q9Y2K5 976 aaKnown RBP17.28■□□□□ 0.36
FAM49B-202ENST00000517654 COCHO43405 550 aa17.27■□□□□ 0.36
FAM49B-202ENST00000517654 ZMYND10O75800 440 aa17.27■□□□□ 0.36
FAM49B-202ENST00000517654 ADRA1BP35368 520 aa17.27■□□□□ 0.36
FAM49B-202ENST00000517654 CCR2P41597 374 aa17.27■□□□□ 0.36
FAM49B-202ENST00000517654 PSEN1P49768 467 aa17.27■□□□□ 0.36
FAM49B-202ENST00000517654 MRPS25P82663 173 aaKnown RBP17.27■□□□□ 0.36
FAM49B-202ENST00000517654 SMAD3P84022 425 aaKnown RBP17.27■□□□□ 0.36
FAM49B-202ENST00000517654 DPYSL2Q16555 572 aa17.27■□□□□ 0.36
FAM49B-202ENST00000517654 ZFYVE27Q5T4F4 411 aa17.27■□□□□ 0.36
FAM49B-202ENST00000517654 ZNF697Q5TEC3 545 aa17.27■□□□□ 0.36
FAM49B-202ENST00000517654 KAZNQ674X7 775 aa17.27■□□□□ 0.36
FAM49B-202ENST00000517654 PDE12Q6L8Q7 609 aaKnown RBP17.27■□□□□ 0.36
FAM49B-202ENST00000517654 CCDC149Q6ZUS6 474 aa17.27■□□□□ 0.36
FAM49B-202ENST00000517654 CEP112Q8N8E3 955 aa17.27■□□□□ 0.36
FAM49B-202ENST00000517654 PRELID2Q8N945 189 aa17.27■□□□□ 0.36
FAM49B-202ENST00000517654 RNF139Q8WU17 664 aa17.27■□□□□ 0.36
FAM49B-202ENST00000517654 OVCA2Q8WZ82 227 aa17.27■□□□□ 0.36
FAM49B-202ENST00000517654 FCRL2Q96LA5 508 aaPredicted RBP17.27■□□□□ 0.36
FAM49B-202ENST00000517654 SLC22A12Q96S37 553 aa17.27■□□□□ 0.36
FAM49B-202ENST00000517654 TRIM62Q9BVG3 475 aa17.27■□□□□ 0.36
FAM49B-202ENST00000517654 RNF38Q9H0F5 515 aa17.27■□□□□ 0.36
FAM49B-202ENST00000517654 EPC1Q9H2F5 836 aa17.27■□□□□ 0.36
FAM49B-202ENST00000517654 DHX35Q9H5Z1 703 aaKnown RBP17.27■□□□□ 0.36
FAM49B-202ENST00000517654 RNF14Q9UBS8 474 aa17.27■□□□□ 0.36
FAM49B-202ENST00000517654 LRG1P02750 347 aa17.26■□□□□ 0.35
FAM49B-202ENST00000517654 GJA1P17302 382 aa17.26■□□□□ 0.35
FAM49B-202ENST00000517654 PTPN7P35236 360 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms