RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 P3H2Q8IVL5 708 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 SFTPA1Q8IWL2 248 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 NRSN1Q8IZ57 195 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 PNPLA1Q8N8W4 532 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 SLC16A11Q8NCK7 471 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 SLC22A17Q8WUG5 538 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 VPS50Q96JG6 964 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 PAAF1Q9BRP4 392 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 ISCA1Q9BUE6 129 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 PRDM13Q9H4Q3 707 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 DAPP1Q9UN19 280 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 PCDHB2Q9Y5E7 798 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 DMRT1Q9Y5R6 373 aa5.93□□□□□ -1.46
HMGCS1-207ENST00000514610 KIF28PB7ZC32 967 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 M0QYT0 321 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 TMPRSS11DO60235 418 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 PPP6R2O75170 966 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 DHRS4L1P0CG22 281 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 GSTM5P46439 218 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 RENBPP51606 427 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 DGKQP52824 942 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 INHBCP55103 352 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 AP2B1P63010 937 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 TAF5Q15542 800 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 TMEM95Q3KNT9 176 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 GRASPQ7Z6J2 395 aaPredicted RBP5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 GALNT15Q8N3T1 639 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 LINC01465Q8N7H1 131 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 TBC1D5Q92609 795 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 RSC1A1Q92681 617 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 REPS1Q96D71 796 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 EDC3Q96F86 508 aaKnown RBP5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 KAZALD1Q96I82 304 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 MMS19Q96T76 1030 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 AGAP2Q99490 1192 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 PAGR1Q9BTK6 254 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 DDX23Q9BUQ8 820 aaKnown RBP5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 MECRQ9BV79 373 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 KLK15Q9H2R5 256 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 IKZF4Q9H2S9 585 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 ITM2CQ9NQX7 267 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 ASB6Q9NWX5 421 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 ASIC5Q9NY37 505 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 CNTN6Q9UQ52 1028 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 PCDHB7Q9Y5E2 793 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 DGKBQ9Y6T7 804 aa5.92□□□□□ -1.46
HMGCS1-207ENST00000514610 CCDC187A0A096LP49 1063 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 LOC105369274A0A096LPK9 316 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 LOC102723532A0A0G2JNH3 316 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 CYR61O00622 381 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 RHOBTB3O94955 611 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 HNRNPCP07910 306 aaKnown RBP eCLIP5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 APEHP13798 732 aaKnown RBP5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 PTH2RP49190 550 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 CLK3P49761 638 aaKnown RBP5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 PRKAA2P54646 552 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 GPC5P78333 572 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 SEMA3BQ13214 749 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 C4orf46Q504U0 113 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 C16orf89Q6UX73 402 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 BCDIN3DQ7Z5W3 292 aaKnown RBP5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 AMIGO2Q86SJ2 522 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 TRABD2AQ86V40 505 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 TTC30AQ86WT1 665 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 OR4N4Q8N0Y3 316 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 WDR60Q8WVS4 1066 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 OVCA2Q8WZ82 227 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 RILPL2Q969X0 211 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 UROC1Q96N76 676 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 TIMP4Q99727 224 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 DUSP26Q9BV47 211 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 CIPCQ9C0C6 399 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 VPS16Q9H269 839 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 CPNE5Q9HCH3 593 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 SNX15Q9NRS6 342 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 RXFP3Q9NSD7 469 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 SLC17A6Q9P2U8 582 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 TLK1Q9UKI8 766 aa5.91□□□□□ -1.46
HMGCS1-207ENST00000514610 POLR2AP24928 1970 aaKnown RBP5.9□□□□□ -1.46
HMGCS1-207ENST00000514610 CREB3O43889 395 aa5.9□□□□□ -1.46
HMGCS1-207ENST00000514610 TMIGD3P0DMS9 266 aaPredicted RBP5.9□□□□□ -1.46
HMGCS1-207ENST00000514610 WT1P19544 449 aaPredicted RBP5.9□□□□□ -1.46
HMGCS1-207ENST00000514610 CST5P28325 142 aaPredicted RBP5.9□□□□□ -1.46
HMGCS1-207ENST00000514610 COPB1P53618 953 aaKnown RBP5.9□□□□□ -1.46
HMGCS1-207ENST00000514610 POLE2P56282 527 aa5.9□□□□□ -1.46
HMGCS1-207ENST00000514610 FAM3BP58499 235 aaPredicted RBP5.9□□□□□ -1.46
HMGCS1-207ENST00000514610 RAE1P78406 368 aaKnown RBP5.9□□□□□ -1.46
HMGCS1-207ENST00000514610 TXNL4AP83876 142 aaKnown RBP5.9□□□□□ -1.46
HMGCS1-207ENST00000514610 FAM153CQ494X1 144 aa5.9□□□□□ -1.46
HMGCS1-207ENST00000514610 TTC22Q5TAA0 569 aa5.9□□□□□ -1.46
HMGCS1-207ENST00000514610 ATPAF1Q5TC12 328 aaPredicted RBP5.9□□□□□ -1.46
HMGCS1-207ENST00000514610 RRAGAQ7L523 313 aa5.9□□□□□ -1.46
HMGCS1-207ENST00000514610 SLC29A4Q7RTT9 530 aa5.9□□□□□ -1.46
HMGCS1-207ENST00000514610 ZNF804AQ7Z570 1209 aa5.9□□□□□ -1.46
HMGCS1-207ENST00000514610 CCDC117Q8IWD4 279 aaPredicted RBP5.9□□□□□ -1.46
HMGCS1-207ENST00000514610 TERB1Q8NA31 727 aa5.9□□□□□ -1.46
HMGCS1-207ENST00000514610 CAGE1Q8TC20 777 aa5.9□□□□□ -1.46
HMGCS1-207ENST00000514610 NPIPB3Q92617 1050 aa5.9□□□□□ -1.46
HMGCS1-207ENST00000514610 SNX18Q96RF0 628 aa5.9□□□□□ -1.46
HMGCS1-207ENST00000514610 KCNK9Q9NPC2 374 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms