RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 TTLL4Q14679 1199 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 IER5Q5VY09 327 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 ZBTB46Q86UZ6 589 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 PLD3Q8IV08 490 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 WDR49Q8IV35 697 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 EBF2Q9HAK2 575 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 CYLDQ9NQC7 956 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 KCNQ5Q9NR82 932 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 DRG1Q9Y295 367 aaKnown RBP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 COMMD3-BMI1R4GMX3 469 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 hCG_1818297A0A087WSY0 165 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 BNIP3LO60238 219 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 USP12O75317 370 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 VDRP11473 427 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 NELFEP18615 380 aaKnown RBP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 ME2P23368 584 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 NUMBP49757 651 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 ACVR2BQ13705 512 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 FAM83EQ2M2I3 478 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 SLC5A9Q2M3M2 681 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 C15orf59Q2T9L4 293 aaPredicted RBP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 APOBEC3HQ6NTF7 200 aaKnown RBP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 APPL2Q8NEU8 664 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 ZNF384Q8TF68 577 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 TMEM176AQ96HP8 235 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 DACH2Q96NX9 599 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 NR1H4Q96RI1 486 aaPredicted RBP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 EGFL8Q99944 293 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 PXMP2Q9NR77 195 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 A0A096LPK6 155 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 NR5A2O00482 541 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 PRPF4O43172 522 aaKnown RBP eCLIP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 TIMM44O43615 452 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 APOA4P06727 396 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 ITGAVP06756 1048 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 ERVK-10P10266 1014 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 CLCN3P51790 818 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 NOMO3P69849 1222 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 GTF2BQ00403 316 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 FOLH1Q04609 750 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 DCTN2Q13561 401 aaKnown RBP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 NEDD8Q15843 81 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 UNC45BQ8IWX7 931 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 PCDH20Q8N6Y1 951 aaKnown RBP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 PABPC5Q96DU9 382 aaKnown RBP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 VAV3Q9UKW4 847 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 RPL26L1Q9UNX3 145 aaKnown RBP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 AFDNP55196 1824 aaKnown RBP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 MYH10P35580 1976 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 SLIT3O75094 1523 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 LYNP07948 512 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 SUPT20HL2P0C7V6 817 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 HIRAP54198 1017 aaPredicted RBP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 WDR4P57081 412 aaKnown RBP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 PGM5Q15124 567 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 TDRD10Q5VZ19 366 aaKnown RBP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 TUBGCP3Q96CW5 907 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 FAM163AQ96GL9 167 aaPredicted RBP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 PCDHAC2Q9Y5I4 1007 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 COL5A2P05997 1499 aaPredicted RBP7.98□□□□□ -1.13
CLCN3-209ENST00000513761 PIK3C2AO00443 1686 aa7.98□□□□□ -1.13
CLCN3-209ENST00000513761 TRIM13O60858 407 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 PTPN7P35236 360 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 CAP2P40123 477 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 SPDYAQ5MJ70 313 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 TBCELQ5QJ74 424 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.97□□□□□ -1.13
CLCN3-209ENST00000513761 PTAR1Q7Z6K3 402 aaPredicted RBP7.97□□□□□ -1.13
CLCN3-209ENST00000513761 TMEM161BQ8NDZ6 487 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 C1orf232A0A0U1RR37 186 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 SUPT3HB4E1H0 165 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 AMPD1P23109 780 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 GP5P40197 560 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 KCNK10P57789 538 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 ABCE1P61221 599 aaKnown RBP7.97□□□□□ -1.13
CLCN3-209ENST00000513761 SPRED3Q2MJR0 410 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 PPP1R15BQ5SWA1 713 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 NAPEPLDQ6IQ20 393 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 CCDC60Q8IWA6 550 aaPredicted RBP7.97□□□□□ -1.13
CLCN3-209ENST00000513761 DPP3Q9NY33 737 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 CCDC167Q9P0B6 97 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 BLOC1S6Q9UL45 172 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 MYRFQ9Y2G1 1151 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 ATP11BQ9Y2G3 1177 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 HEATR9A2RTY3 570 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 MYO1GB0I1T2 1018 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 KCNK1O00180 336 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 MICAL2O94851 1124 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 NCAM1P13591 858 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 VAV1P15498 845 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 CSHL1Q14406 222 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 KIZQ2M2Z5 673 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 KCNT2Q6UVM3 1135 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 KYAT3Q6YP21 454 aaKnown RBP7.97□□□□□ -1.13
CLCN3-209ENST00000513761 SCUBE3Q8IX30 993 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 WDR60Q8WVS4 1066 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 TSPAN17Q96FV3 270 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms