RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 HDDC3Q8N4P3 179 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 LEMD2Q8NC56 503 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 BPIFB1Q8TDL5 484 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 SLC39A7Q92504 469 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 KAT5Q92993 513 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 VCPIP1Q96JH7 1222 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 CAMK1GQ96NX5 476 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 NOX5Q96PH1 765 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 ALS2CR12Q96Q35 445 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 WDR24Q96S15 920 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 GTPBP2Q9BX10 602 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 LZTFL1Q9NQ48 299 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 GKN1Q9NS71 199 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 UBQLN1Q9UMX0 589 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 JRKLQ9Y4A0 524 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 NUB1Q9Y5A7 615 aa11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 ATXN2Q99700 1313 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-217ENST00000512274 DSPP15924 2871 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 CTAGE9A4FU28 777 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 OTOL1A6NHN0 477 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 TMEM189-UBE2V1I3L0A0 370 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 RTN2O75298 545 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 TACC1O75410 805 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 LSM8O95777 96 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 CST3P01034 146 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 PAEPP09466 180 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 CPB1P15086 417 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 CHRNB2P17787 502 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 TNFAIP3P21580 790 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 LRPAP1P30533 357 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 CASQ1P31415 396 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 CDH5P33151 784 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 PNPLA4P41247 253 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 ASPAP45381 313 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 GALK1P51570 392 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 ATXN3P54252 364 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 MYL6P60660 151 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 TFAMQ00059 246 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 AMPD2Q01433 879 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 FMO1Q01740 532 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 UPP1Q16831 310 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 ZNF423Q2M1K9 1284 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 ZNF699Q32M78 642 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 LMBRD2Q68DH5 695 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 TRIM68Q6AZZ1 485 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 RNF19BQ6ZMZ0 732 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 LIMS2Q7Z4I7 341 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 NOP9Q86U38 636 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 BEST2Q8NFU1 509 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 MYRIPQ8NFW9 859 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 OR2I1PQ8NGU4 316 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 RFFLQ8WZ73 363 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 CHFRQ96EP1 664 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 NAPGQ99747 312 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 LRRC3Q9BY71 257 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 ZNF518BQ9C0D4 1074 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 SMG9Q9H0W8 520 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 ATXN3LQ9H3M9 355 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 SCUBE2Q9NQ36 999 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 TMEM74BQ9NUR3 256 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 EBF1Q9UH73 591 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 EVLQ9UI08 416 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 KIAA1257Q9ULG3 409 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 PCDHGC3Q9UN70 934 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 RAI2Q9Y5P3 530 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 PTPRBP23467 1997 aa11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 ZNF638Q14966 1978 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-217ENST00000512274 CEP192Q8TEP8 1941 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 PI4KAP42356 2102 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 A0A0U1RQJ8 604 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 H7C4K7 107 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 CES2O00748 559 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 TRDMT1O14717 391 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 CTIFO43310 598 aaKnown RBP11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 PRAMEF12O95522 483 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 CYP1A1P04798 512 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 CFIP05156 583 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 MYBL1P10243 752 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 UNGP13051 313 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 CENPCQ03188 943 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 ARID5AQ03989 594 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 RUNX3Q13761 415 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 ZNF667Q5HYK9 610 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 ZNF569Q5MCW4 686 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 TPGS2Q68CL5 300 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 CCNI2Q6ZMN8 369 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 SYT13Q7L8C5 426 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 SLFN11Q7Z7L1 901 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 TMC8Q8IU68 726 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 RHOT2Q8IXI1 618 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 TMEFF1Q8IYR6 380 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 TSTD1Q8NFU3 115 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 SPATA18Q8TC71 538 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 RLN3Q8WXF3 142 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 TRIM11Q96F44 468 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 PGLYRP2Q96PD5 576 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 UBL7Q96S82 380 aaPredicted RBP11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 PI4K2AQ9BTU6 479 aa11.03□□□□□ -0.64
PDLIM5-217ENST00000512274 EBF3Q9H4W6 596 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms