RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 CELF5Q8N6W0 485 aaKnown RBP7.19□□□□□ -1.26
COPS4-209ENST00000511653 ATAD1Q8NBU5 361 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 LEMD2Q8NC56 503 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 HEXIM2Q96MH2 286 aaKnown RBP7.19□□□□□ -1.26
COPS4-209ENST00000511653 PLIN2Q99541 437 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 IER2Q9BTL4 223 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 KLHL25Q9H0H3 589 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.19□□□□□ -1.26
COPS4-209ENST00000511653 C7orf69Q9H7B7 122 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 SEMA4GQ9NTN9 838 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 RAB23Q9ULC3 237 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 DNM3Q9UQ16 869 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 SETXQ7Z333 2677 aaKnown RBP7.19□□□□□ -1.26
COPS4-209ENST00000511653 MYBPHLA2RUH7 354 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 SPECC1L-ADORA2AF8WAN1 911 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 SLC30A4O14863 429 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 CHADO15335 359 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 TBX1O43435 398 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 U2AF2P26368 475 aaKnown RBP eCLIP7.19□□□□□ -1.26
COPS4-209ENST00000511653 MARCKSP29966 332 aaPredicted RBP7.19□□□□□ -1.26
COPS4-209ENST00000511653 LRPAP1P30533 357 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 CYP4F8P98187 520 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 IFRD2Q12894 506 aaPredicted RBP7.19□□□□□ -1.26
COPS4-209ENST00000511653 PDIA5Q14554 519 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 PON2Q15165 354 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 ZBTB6Q15916 424 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 KRT79Q5XKE5 535 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 CENPPQ6IPU0 288 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 ZPBP2Q6X784 338 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 ARID3BQ8IVW6 561 aaPredicted RBP7.19□□□□□ -1.26
COPS4-209ENST00000511653 OR10T2Q8NGX3 314 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 NETO1Q8TDF5 533 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 CSGALNACT1Q8TDX6 532 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 LRRC15Q8TF66 581 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 TP53INP1Q96A56 240 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 DHRS1Q96LJ7 313 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 Q96M66 194 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 FAM83CQ9BQN1 747 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 NTPCRQ9BSD7 190 aaKnown RBP7.19□□□□□ -1.26
COPS4-209ENST00000511653 NOL7Q9UMY1 257 aaKnown RBP7.19□□□□□ -1.26
COPS4-209ENST00000511653 LIMCH1Q9UPQ0 1083 aa7.19□□□□□ -1.26
COPS4-209ENST00000511653 LACTBL1A8MY62 500 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 CLDN3O15551 220 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 LRP3O75074 770 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 PAPSS2O95340 614 aaPredicted RBP7.18□□□□□ -1.26
COPS4-209ENST00000511653 CLTAP09496 248 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 FAM153BP0C7A2 387 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 PLS3P13797 630 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 ATF6P18850 670 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 GABRR2P28476 465 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 MATR3P43243 847 aaKnown RBP eCLIP7.18□□□□□ -1.26
COPS4-209ENST00000511653 PXNP49023 591 aaPredicted RBP7.18□□□□□ -1.26
COPS4-209ENST00000511653 KPNA1P52294 538 aaPredicted RBP7.18□□□□□ -1.26
COPS4-209ENST00000511653 SLC12A3P55017 1021 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 NCKAP1LP55160 1127 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 MLLT6P55198 1093 aaPredicted RBP7.18□□□□□ -1.26
COPS4-209ENST00000511653 STRN3Q13033 797 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 GPR17Q13304 367 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 LRRC32Q14392 662 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 PPP2R5DQ14738 602 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 CCDC6Q16204 474 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 CSRP2Q16527 193 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 GPR158Q5T848 1215 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 FOXB2Q5VYV0 432 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 SLC39A4Q6P5W5 647 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 DSTYKQ6XUX3 929 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.18□□□□□ -1.26
COPS4-209ENST00000511653 LONP2Q86WA8 852 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 YAF2Q8IY57 180 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 STKLD1Q8NE28 680 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 PSMG2Q969U7 264 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 CHFRQ96EP1 664 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 LLPHQ9BRT6 129 aaKnown RBP7.18□□□□□ -1.26
COPS4-209ENST00000511653 YIPF2Q9BWQ6 316 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 RAB34Q9BZG1 259 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 MKRN2Q9H000 416 aaKnown RBP7.18□□□□□ -1.26
COPS4-209ENST00000511653 C17orf75Q9HAS0 396 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 TPSG1Q9NRR2 321 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 RXFP3Q9NSD7 469 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 POLR3BQ9NW08 1133 aaPredicted RBP7.18□□□□□ -1.26
COPS4-209ENST00000511653 MAFFQ9ULX9 164 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 UBQLN1Q9UMX0 589 aaKnown RBP7.18□□□□□ -1.26
COPS4-209ENST00000511653 PCNX2A6NKB5 2137 aa7.18□□□□□ -1.26
COPS4-209ENST00000511653 ACACAQ13085 2346 aa7.17□□□□□ -1.26
COPS4-209ENST00000511653 KNL1Q8NG31 2342 aa7.17□□□□□ -1.26
COPS4-209ENST00000511653 OR6C75A6NL08 312 aa7.17□□□□□ -1.26
COPS4-209ENST00000511653 EXTL3O43909 919 aa7.17□□□□□ -1.26
COPS4-209ENST00000511653 PLA2G4BP0C869 781 aa7.17□□□□□ -1.26
COPS4-209ENST00000511653 CYP3A5P20815 502 aa7.17□□□□□ -1.26
COPS4-209ENST00000511653 ALDH1A3P47895 512 aa7.17□□□□□ -1.26
COPS4-209ENST00000511653 EPHB3P54753 998 aa7.17□□□□□ -1.26
COPS4-209ENST00000511653 LILRA4P59901 499 aa7.17□□□□□ -1.26
COPS4-209ENST00000511653 HMGN5P82970 282 aaKnown RBP7.17□□□□□ -1.26
COPS4-209ENST00000511653 PLD1Q13393 1074 aa7.17□□□□□ -1.26
COPS4-209ENST00000511653 SF3A2Q15428 464 aaKnown RBP7.17□□□□□ -1.26
COPS4-209ENST00000511653 ST3GAL2Q16842 350 aa7.17□□□□□ -1.26
COPS4-209ENST00000511653 HYIQ5T013 277 aa7.17□□□□□ -1.26
COPS4-209ENST00000511653 YOD1Q5VVQ6 348 aaPredicted RBP7.17□□□□□ -1.26
COPS4-209ENST00000511653 NAIF1Q69YI7 327 aaPredicted RBP7.17□□□□□ -1.26
COPS4-209ENST00000511653 JADE1Q6IE81 842 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms