RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 BST2Q10589 180 aaKnown RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 TCF15Q12870 199 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 ILF3Q12906 894 aaKnown RBP eCLIP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 HIC1Q14526 733 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 NR0B2Q15466 257 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 MARCH8Q5T0T0 291 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 ZNF574Q6ZN55 896 aaPredicted RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 CHST9Q7L1S5 443 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 DYMQ7RTS9 669 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 DHX40Q8IX18 779 aaKnown RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 MINDY1Q8N5J2 469 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 TXNDC5Q8NBS9 432 aaKnown RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 ATAD1Q8NBU5 361 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 C7orf57Q8NEG2 295 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 SUN3Q8TAQ9 357 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 GRIN3AQ8TCU5 1115 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 MAPK15Q8TD08 544 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 LENG9Q96B70 501 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 CNDP2Q96KP4 475 aaKnown RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 HSPA12BQ96MM6 686 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 HHIPQ96QV1 700 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 PCYT2Q99447 389 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 MMTAG2Q9BU76 263 aaKnown RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 TRIM5Q9C035 493 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 XPO4Q9C0E2 1151 aaKnown RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 NRSN2Q9GZP1 204 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 EBF3Q9H4W6 596 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 GAREM1Q9H706 876 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 NCOA5Q9HCD5 579 aaKnown RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 FANCFQ9NPI8 374 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 SEPT11Q9NVA2 429 aaKnown RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 SMPD4Q9NXE4 827 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 GDAP2Q9NXN4 497 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 ARHGAP28Q9P2N2 729 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 TTC3P53804 2025 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 CCDC187A0A096LP49 1063 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 FAM47DPA6NHR8 397 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 OR5K4A6NMS3 321 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 CFAP99D6REC4 459 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 NEDD8-MDP1E9PL57 170 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 MKRN2OSH3BPM6 223 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 LEFTY2O00292 366 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 PEX12O00623 359 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 PRPF4O43172 522 aaKnown RBP eCLIP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 HOXC11O43248 304 aaPredicted RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 MGEA5O60502 916 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 LILRB5O75023 590 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 PPP6R2O75170 966 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 STAU1O95793 577 aaKnown RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 RARGP13631 454 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 ACO1P21399 889 aaKnown RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 GJB2P29033 226 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 CCR1P32246 355 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 GJA4P35212 333 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 RABIFP47224 123 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 RRADP55042 308 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 ANTXR2P58335 489 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 FKBP3Q00688 224 aaKnown RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 LRRC63Q05C16 580 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 CCDC173Q0VFZ6 552 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 E2F4Q16254 413 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 MDH1BQ5I0G3 518 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 FAXCQ5TGI0 409 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 PMS2CLQ68D20 193 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 KIAA1161Q6NSJ0 714 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 CCDC81Q6ZN84 652 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 RTN4RL1Q86UN2 441 aaPredicted RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 NAXDQ8IW45 347 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 CACTIN-AS1Q8N1I8 211 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 IL22RA1Q8N6P7 574 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 BEND7Q8N7W2 519 aaPredicted RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 ARL14EPQ8N8R7 260 aaPredicted RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 OR14C36Q8NHC7 312 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 SHKBP1Q8TBC3 707 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 CCHCR1Q8TD31 782 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 LMX1AQ8TE12 382 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 JAKMIP2Q96AA8 810 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 DHX58Q96C10 678 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 HAUS1Q96CS2 278 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 PPP1R10Q96QC0 940 aaKnown RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 CMKLR1Q99788 373 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 EIF2AQ9BY44 585 aaKnown RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 NUCKS1Q9H1E3 243 aaKnown RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 CDHR5Q9HBB8 845 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 PREBQ9HCU5 417 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 CNGB3Q9NQW8 809 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 KRT82Q9NSB4 513 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 GPN3Q9UHW5 284 aaPredicted RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 FZD4Q9ULV1 537 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 CYP8B1Q9UNU6 501 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 ZNFX1Q9P2E3 1918 aaKnown RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 A6NNZ2 444 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 SMTNL1A8MU46 457 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 C9J4A7 227 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 GOLGA6L19H0YKK7 550 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 CLDN11O75508 207 aa2.96□□□□□ -1.94
CLOCK-209ENST00000511124 RNASEH2AO75792 299 aaKnown RBP2.96□□□□□ -1.94
CLOCK-209ENST00000511124 ERBB2P04626 1255 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms