RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 CEP41Q9BYV8 373 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 UBE2OQ9C0C9 1292 aaKnown RBP7.38□□□□□ -1.23
KDM3B-207ENST00000510866 RUBCNLQ9H714 662 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 SLC28A3Q9HAS3 691 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 NDE1Q9NXR1 346 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 PSD3Q9NYI0 1048 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 FBXO10Q9UK96 956 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 VANGL2Q9ULK5 521 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 DRG1Q9Y295 367 aaKnown RBP7.38□□□□□ -1.23
KDM3B-207ENST00000510866 RGPD8O14715 1765 aaPredicted RBP7.38□□□□□ -1.23
KDM3B-207ENST00000510866 AKAP12Q02952 1782 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 NDUFS2O75306 463 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 GLP2RO95838 553 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 LMNAP02545 664 aaKnown RBP7.38□□□□□ -1.23
KDM3B-207ENST00000510866 ATP5BP06576 529 aaKnown RBP7.38□□□□□ -1.23
KDM3B-207ENST00000510866 ERVK-10P10266 1014 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 PTENP60484 403 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 GTF2BQ00403 316 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 ST3GAL1Q11201 340 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 PHKG1Q16816 387 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 TRIM60Q495X7 471 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 CBWD6Q4V339 395 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 CBWD3Q5JTY5 395 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 CBWD5Q5RIA9 395 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 C6orf10Q5SRN2 563 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 IFNL1Q8IU54 200 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 TMEM161BQ8NDZ6 487 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 CEP70Q8NHQ1 597 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 APBB2Q92870 758 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 SGF29Q96ES7 293 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 ZDHHC6Q9H6R6 413 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 TCP11X1B4DZS4 312 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 DUSP11O75319 330 aaKnown RBP7.38□□□□□ -1.23
KDM3B-207ENST00000510866 ATP5HO75947 161 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 SPATA31D3P0C874 917 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 CYP2A6P11509 494 aaPredicted RBP7.38□□□□□ -1.23
KDM3B-207ENST00000510866 HDAC4P56524 1084 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 ITGB3BPQ13352 177 aaPredicted RBP7.38□□□□□ -1.23
KDM3B-207ENST00000510866 PPIGQ13427 754 aaKnown RBP eCLIP7.38□□□□□ -1.232e-6■■■□□ 15.2
KDM3B-207ENST00000510866 AGAP9Q5VTM2 703 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 LRIG3Q6UXM1 1119 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 SPATA31D4Q6ZUB0 917 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 LRRC8DQ7L1W4 858 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 OTOP2Q7RTS6 562 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 MSL3Q8N5Y2 521 aaKnown RBP7.38□□□□□ -1.23
KDM3B-207ENST00000510866 FAM167BQ9BTA0 163 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 NEUROG2Q9H2A3 272 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 RNPEPQ9H4A4 650 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 LRRC40Q9H9A6 602 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 SLC24A3Q9HC58 644 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 MARCOQ9UEW3 520 aaPredicted RBP7.38□□□□□ -1.23
KDM3B-207ENST00000510866 GRID1Q9ULK0 1009 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 FAM50BQ9Y247 325 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 DYRK1BQ9Y463 629 aa7.38□□□□□ -1.23
KDM3B-207ENST00000510866 IFRD1O00458 451 aaPredicted RBP7.37□□□□□ -1.23
KDM3B-207ENST00000510866 SCAMP3O14828 347 aaKnown RBP7.37□□□□□ -1.23
KDM3B-207ENST00000510866 CA12O43570 354 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 ADRB2P07550 413 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 SERPINF2P08697 491 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 YBX3P16989 372 aaKnown RBP eCLIP7.37□□□□□ -1.239e-9■□□□□ 9.3
KDM3B-207ENST00000510866 AMPD1P23109 780 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 CRHR2Q13324 411 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 FIGNQ5HY92 759 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 RINLQ6ZS11 566 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 ILDR2Q71H61 639 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 SH3BP5LQ7L8J4 393 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 UNC93AQ86WB7 457 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 FBXO36Q8NEA4 188 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 OR2W6PQ8NHA6 318 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 PNKPQ96T60 521 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 COPS7BQ9H9Q2 264 aaPredicted RBP7.37□□□□□ -1.23
KDM3B-207ENST00000510866 SPASTQ9UBP0 616 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 RUVBL2Q9Y230 463 aaKnown RBP7.37□□□□□ -1.23
KDM3B-207ENST00000510866 SHPRHQ149N8 1683 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 KPNA3O00505 521 aaPredicted RBP7.37□□□□□ -1.23
KDM3B-207ENST00000510866 RARGP13631 454 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 HDCP19113 662 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 CASP5P51878 434 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 ESRRGP62508 458 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 MCL1Q07820 350 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 TEDDM1Q5T9Z0 273 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 CDKAL1Q5VV42 579 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 DOK6Q6PKX4 331 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 DLK2Q6UY11 383 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 PTAR1Q7Z6K3 402 aaPredicted RBP7.37□□□□□ -1.23
KDM3B-207ENST00000510866 RGL4Q8IZJ4 473 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 KIRREL3Q8IZU9 778 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.37□□□□□ -1.233e-6■■■■□ 21.4
KDM3B-207ENST00000510866 C18orf25Q96B23 403 aaPredicted RBP7.37□□□□□ -1.23
KDM3B-207ENST00000510866 PDLIM2Q96JY6 352 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 RIC8BQ9NVN3 520 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 SCOCQ9UIL1 159 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 LNPEPQ9UIQ6 1025 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 SPACA6W5XKT8 324 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 A0A0A6YYK5 440 aaPredicted RBP7.37□□□□□ -1.23
KDM3B-207ENST00000510866 NPR3P17342 541 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 HIBCHQ6NVY1 386 aaPredicted RBP7.37□□□□□ -1.23
KDM3B-207ENST00000510866 NLRP14Q86W24 1093 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 NUP93Q8N1F7 819 aa7.37□□□□□ -1.23
KDM3B-207ENST00000510866 ETNPPLQ8TBG4 499 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms