RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 SYNDIG1Q9H7V2 258 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 NEXMIFQ5QGS0 1516 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 IQSEC2Q5JU85 1478 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 NPM3O75607 178 aaKnown RBP10.87□□□□□ -0.67
NEK1-206ENST00000510533 RPS12P25398 132 aaKnown RBP10.87□□□□□ -0.67
NEK1-206ENST00000510533 TRIM71Q2Q1W2 868 aaKnown RBP10.87□□□□□ -0.67
NEK1-206ENST00000510533 FAM98BQ52LJ0 330 aaKnown RBP10.87□□□□□ -0.67
NEK1-206ENST00000510533 ERMARDQ5T6L9 678 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 NT5DC1Q5TFE4 455 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 B3GALNT2Q8NCR0 500 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 HDAC7Q8WUI4 952 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 OSCP1Q8WVF1 389 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 TATDN2Q93075 761 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 TRAPPC9Q96Q05 1148 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 CAMKK2Q96RR4 588 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 CYP39A1Q9NYL5 469 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 CROTQ9UKG9 612 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 PCDHA3Q9Y5H8 950 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 CEMIPQ8WUJ3 1361 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 C4BPBP20851 252 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 CD151P48509 253 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 PRKAA2P54646 552 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 IFI35P80217 286 aaPredicted RBP10.87□□□□□ -0.67
NEK1-206ENST00000510533 NR6A1Q15406 480 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 BNIPLQ7Z465 357 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 PTAR1Q7Z6K3 402 aaPredicted RBP10.87□□□□□ -0.67
NEK1-206ENST00000510533 OR8H2Q8N162 312 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 C10orf53Q8N6V4 93 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 LRRN4CLQ8ND94 238 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 GMCL1P1Q8NEA9 526 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 AGBL3Q8NEM8 1001 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 SMAD5Q99717 465 aaKnown RBP10.87□□□□□ -0.67
NEK1-206ENST00000510533 MTIF3Q9H2K0 278 aaKnown RBP10.87□□□□□ -0.67
NEK1-206ENST00000510533 ELOVL6Q9H5J4 265 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 AGO4Q9HCK5 861 aaKnown RBP10.87□□□□□ -0.67
NEK1-206ENST00000510533 NT5MQ9NPB1 228 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 DYRK1BQ9Y463 629 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 ERI2A8K979 691 aaKnown RBP10.87□□□□□ -0.67
NEK1-206ENST00000510533 H7C4K7 107 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 GPR182O15218 404 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 TRIM13O60858 407 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 LRG1P02750 347 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 EIF2S1P05198 315 aaKnown RBP10.87□□□□□ -0.67
NEK1-206ENST00000510533 PECAM1P16284 738 aaPredicted RBP10.87□□□□□ -0.67
NEK1-206ENST00000510533 YY1P25490 414 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 TBX2Q13207 712 aaPredicted RBP10.87□□□□□ -0.67
NEK1-206ENST00000510533 NFIL3Q16649 462 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 TCHHL1Q5QJ38 904 aaPredicted RBP10.87□□□□□ -0.67
NEK1-206ENST00000510533 SDE2Q6IQ49 451 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 DHFR2Q86XF0 187 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 RMND5BQ96G75 393 aaPredicted RBP10.87□□□□□ -0.67
NEK1-206ENST00000510533 TMEM237Q96Q45 408 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 TBCBQ99426 244 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 NUDT12Q9BQG2 462 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 PRRG3Q9BZD7 231 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 RIOX1Q9H6W3 641 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 INTS13Q9NVM9 706 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 CDC42BPAQ5VT25 1732 aa10.87□□□□□ -0.67
NEK1-206ENST00000510533 GNG14A0A1W2PPG7 69 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 HSMCR30P0CW71 290 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 RARAP10276 462 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 PGAM1P18669 254 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 SKIV2L2P42285 1042 aaKnown RBP10.86□□□□□ -0.67
NEK1-206ENST00000510533 EN1Q05925 392 aaPredicted RBP10.86□□□□□ -0.67
NEK1-206ENST00000510533 PGM2Q96G03 612 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 CPB2Q96IY4 423 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 NSMCE2Q96MF7 247 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 BDH2Q9BUT1 245 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 ROGDIQ9GZN7 287 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 MYLK2Q9H1R3 596 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 CAPN10Q9HC96 672 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 UBP1Q9NZI7 540 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 COPG2Q9UBF2 871 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 C15orf41Q9Y2V0 281 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 SESN1Q9Y6P5 492 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 SPACA6W5XKT8 324 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 CNTNAP4Q9C0A0 1308 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 MEI4A8MW99 385 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 ZNF862O60290 1169 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 DDHD2O94830 711 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 BCL10O95999 233 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 MT-CO1P00395 513 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 EGFRP00533 1210 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 ATP5BP06576 529 aaKnown RBP10.86□□□□□ -0.67
NEK1-206ENST00000510533 RAG1P15918 1043 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 PSMB9P28065 219 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 LHX1P48742 406 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 CDH17Q12864 832 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 C1DQ13901 141 aaKnown RBP10.86□□□□□ -0.67
NEK1-206ENST00000510533 TRIM25Q14258 630 aaKnown RBP10.86□□□□□ -0.67
NEK1-206ENST00000510533 FAM45BPQ6NSW5 357 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 ANKRD13AQ8IZ07 590 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 VCPIP1Q96JH7 1222 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 MAML3Q96JK9 1138 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 SEPHS2Q99611 448 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 PIF1Q9H611 641 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 HACL1Q9UJ83 578 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 ADAM30Q9UKF2 790 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 CCNG1P51959 295 aa10.86□□□□□ -0.67
NEK1-206ENST00000510533 EFEMP1Q12805 493 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms