RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 TUBA3EQ6PEY2 450 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 LVRNQ6Q4G3 990 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 MMS22LQ6ZRQ5 1243 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 RHOUQ7L0Q8 258 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 RAB11FIP2Q7L804 512 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 MRGPREQ86SM8 312 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 RAB11FIP4Q86YS3 637 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 C2CD5Q86YS7 1000 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 CLASRPQ8N2M8 674 aaKnown RBP3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 LCORLQ8N3X6 602 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 LRRC71Q8N4P6 559 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 SH3RF3Q8TEJ3 882 aaPredicted RBP3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 RSC1A1Q92681 617 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 C3orf49Q96BT1 292 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 MCRS1Q96EZ8 462 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 NUDT22Q9BRQ3 303 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 ALG8Q9BVK2 526 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 VPS16Q9H269 839 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 SEPSECSQ9HD40 501 aaKnown RBP3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 RRP7BPQ9NSQ0 103 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 EHD3Q9NZN3 535 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 DAPP1Q9UN19 280 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 LZTS1Q9Y250 596 aa3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 LRRFIP2Q9Y608 721 aaKnown RBP3.59□□□□□ -1.83
CALCOCO2-216ENST00000509784 EIF4G3O43432 1585 aaKnown RBP3.59□□□□□ -1.84
CALCOCO2-216ENST00000509784 KIF28PB7ZC32 967 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 H0Y3Z8 333 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 AP4M1O00189 453 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 KIAA0355O15063 1070 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 NCAM2O15394 837 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 MPPED1O15442 326 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 CBFA2T3O75081 653 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 PMPCBO75439 489 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 RPP40O75818 363 aaKnown RBP3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 FAM155BO75949 473 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 KRT38O76015 456 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 ONECUT2O95948 504 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 CKMT1AP12532 417 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 CREB1P16220 341 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 ZFXP17010 805 aaPredicted RBP3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 CNTFP26441 200 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 FOLR3P41439 243 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 AARSP49588 968 aaKnown RBP eCLIP3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 TPTEP56180 551 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 EFEMP1Q12805 493 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 MTAPQ13126 283 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 BMPR2Q13873 1038 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 PTPRRQ15256 657 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 PTPAQ15257 358 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 LSM12Q3MHD2 195 aaKnown RBP3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 FBXO47Q5MNV8 452 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 KAZNQ674X7 775 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 GRHL2Q6ISB3 625 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 MSANTD2Q6P1R3 559 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 SPRED1Q7Z699 444 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 KRTAP19-1Q8IUB9 90 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 P3H2Q8IVL5 708 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 SLC44A3Q8N4M1 653 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 OR6Y1Q8NGX8 325 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 SPPL3Q8TCT6 385 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 PNISRQ8TF01 805 aaKnown RBP3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 UBE2Q2Q8WVN8 375 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 HMGB4Q8WW32 186 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 RFKQ969G6 155 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 RSPRY1Q96DX4 576 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 ZNF503Q96F45 646 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 WDYHV1Q96HA8 205 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 VPS50Q96JG6 964 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 PBKQ96KB5 322 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 PRR25Q96S07 402 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 EIF3CQ99613 913 aaKnown RBP3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 DDX23Q9BUQ8 820 aaKnown RBP3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 KRTAP9-9Q9BYP9 154 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 KRTAP9-4Q9BYQ2 154 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 VPS45Q9NRW7 570 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 FEM1BQ9UK73 627 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 CNTN6Q9UQ52 1028 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 PCDHB7Q9Y5E2 793 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 PARD3Q8TEW0 1356 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 NUP153P49790 1475 aaKnown RBP3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 PRDM15P57071 1507 aaPredicted RBP3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 KIAA0586Q9BVV6 1533 aa3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 EIF2AK4Q9P2K8 1649 aaKnown RBP3.58□□□□□ -1.84
CALCOCO2-216ENST00000509784 WDR27A2RRH5 827 aa3.57□□□□□ -1.84
CALCOCO2-216ENST00000509784 FAM90A18PA6NE21 464 aa3.57□□□□□ -1.84
CALCOCO2-216ENST00000509784 FAM90A16PA6NEW6 464 aa3.57□□□□□ -1.84
CALCOCO2-216ENST00000509784 FAM90A9PA6NNJ1 464 aa3.57□□□□□ -1.84
CALCOCO2-216ENST00000509784 EFCAB8A8MWE9 144 aa3.57□□□□□ -1.84
CALCOCO2-216ENST00000509784 FAM90A5PA8MXJ8 464 aa3.57□□□□□ -1.84
CALCOCO2-216ENST00000509784 CES2O00748 559 aa3.57□□□□□ -1.84
CALCOCO2-216ENST00000509784 UNC13BO14795 1591 aa3.57□□□□□ -1.84
CALCOCO2-216ENST00000509784 CA12O43570 354 aa3.57□□□□□ -1.84
CALCOCO2-216ENST00000509784 SPRY2O43597 315 aa3.57□□□□□ -1.84
CALCOCO2-216ENST00000509784 PLXNC1O60486 1568 aa3.57□□□□□ -1.84
CALCOCO2-216ENST00000509784 NXPH3O95157 252 aa3.57□□□□□ -1.84
CALCOCO2-216ENST00000509784 PRKCBP05771 671 aa3.57□□□□□ -1.84
CALCOCO2-216ENST00000509784 FAM90A15PP0C7V4 464 aa3.57□□□□□ -1.84
CALCOCO2-216ENST00000509784 FAM90A14PP0C7W9 464 aa3.57□□□□□ -1.84
CALCOCO2-216ENST00000509784 JUPP14923 745 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms