RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 MTMR12Q9C0I1 747 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 NYXQ9GZU5 481 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 DDX4Q9NQI0 724 aaKnown RBP4.78□□□□□ -1.64
NIPBL-206ENST00000509429 RXFP3Q9NSD7 469 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 TBCCD1Q9NVR7 557 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 VPS18Q9P253 973 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 HESX1Q9UBX0 185 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 AMACRQ9UHK6 382 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 DSEQ9UL01 958 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 CFL2Q9Y281 166 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 TMEM5Q9Y2B1 443 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 AATKQ6ZMQ8 1374 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 FLT1P17948 1338 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 SALL3Q9BXA9 1300 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 ADCY10Q96PN6 1610 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 ZSCAN5CA6NGD5 496 aaPredicted RBP4.77□□□□□ -1.65
NIPBL-206ENST00000509429 OR5K4A6NMS3 321 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 GOLGA8BA8MQT2 603 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 F5H0A9 414 aaPredicted RBP4.77□□□□□ -1.65
NIPBL-206ENST00000509429 GOLGA8SH3BPF8 625 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 STMND1H3BQB6 276 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 DDX39AO00148 427 aaKnown RBP4.77□□□□□ -1.65
NIPBL-206ENST00000509429 AP3D1O14617 1153 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 HAT1O14929 419 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 MAGEB3O15480 346 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 ATP8B1O43520 1251 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 SMAD6O43541 496 aaKnown RBP4.77□□□□□ -1.65
NIPBL-206ENST00000509429 B3GALT2O43825 422 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 CUTAO60888 179 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 ZC3H11AO75152 810 aaKnown RBP eCLIP4.77□□□□□ -1.65
NIPBL-206ENST00000509429 NIPSNAP2O75323 286 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 OR5F1O95221 314 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 KCNH1O95259 989 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 STARD3NLO95772 234 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 PF4V1P10720 104 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 IL6STP40189 918 aaPredicted RBP4.77□□□□□ -1.65
NIPBL-206ENST00000509429 CETN2P41208 172 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 MRPL12P52815 198 aaKnown RBP4.77□□□□□ -1.65
NIPBL-206ENST00000509429 CSNK2BP67870 215 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 TUBA4AP68366 448 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 FOXF2Q12947 444 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 TRPC3Q13507 836 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 TOB2Q14106 344 aaPredicted RBP4.77□□□□□ -1.65
NIPBL-206ENST00000509429 DHX34Q14147 1143 aaKnown RBP4.77□□□□□ -1.65
NIPBL-206ENST00000509429 STAT4Q14765 748 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 INSCQ1MX18 579 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 ZNF674Q2M3X9 581 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 ERCC6LQ2NKX8 1250 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 ALG11Q2TAA5 492 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 USH1GQ495M9 461 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 XKR3Q5GH77 459 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 LY6G5CQ5SRR4 150 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 ZBTB41Q5SVQ8 909 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 BEND6Q5SZJ8 279 aaPredicted RBP4.77□□□□□ -1.65
NIPBL-206ENST00000509429 SYDE2Q5VT97 1194 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 MIS18BP1Q6P0N0 1132 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 FBXL19Q6PCT2 694 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 AAGABQ6PD74 315 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 RANBP10Q6VN20 620 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 MEX3BQ6ZN04 569 aaKnown RBP4.77□□□□□ -1.65
NIPBL-206ENST00000509429 TMTC1Q8IUR5 882 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 WDR49Q8IV35 697 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 C10orf67Q8IYJ2 551 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 CNTROBQ8N137 903 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 OR8H3Q8N146 312 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 ANKRD52Q8NB46 1076 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 ZSWIM2Q8NEG5 633 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 SHCBP1Q8NEM2 672 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 ST13P5Q8NFI4 369 aaPredicted RBP4.77□□□□□ -1.65
NIPBL-206ENST00000509429 ADCY4Q8NFM4 1077 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 TTLL11Q8NHH1 800 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 SLC22A8Q8TCC7 542 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 HERVK_113Q902F9 699 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 CFHR4Q92496 578 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 CUL5Q93034 780 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 ATP2A3Q93084 1043 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 SAAL1Q96ER3 474 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 MAELQ96JY0 434 aaKnown RBP4.77□□□□□ -1.65
NIPBL-206ENST00000509429 RUNDC3BQ96NL0 473 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 EYA3Q99504 573 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 MPHOSPH9Q99550 1183 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 CGREF1Q99674 301 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 CCT7Q99832 543 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 DDX50Q9BQ39 737 aaKnown RBP4.77□□□□□ -1.65
NIPBL-206ENST00000509429 BCL7BQ9BQE9 202 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 KIFC3Q9BVG8 833 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 STK31Q9BXU1 1019 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 ADGRE3Q9BY15 652 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 SLC29A3Q9BZD2 475 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 ARHGAP39Q9C0H5 1083 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 PUS7LQ9H0K6 701 aaKnown RBP4.77□□□□□ -1.65
NIPBL-206ENST00000509429 DENND2DQ9H6A0 471 aaPredicted RBP4.77□□□□□ -1.65
NIPBL-206ENST00000509429 XKR8Q9H6D3 395 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 UCK1Q9HA47 277 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 TCF7L1Q9HCS4 588 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 ST7Q9NRC1 585 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 FAM86C1Q9NVL1 165 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.77□□□□□ -1.65
NIPBL-206ENST00000509429 WHRNQ9P202 907 aa4.77□□□□□ -1.65
NIPBL-206ENST00000509429 MBD2Q9UBB5 411 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms