RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 PIGZQ86VD9 579 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 SYT12Q8IV01 421 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 IPO4Q8TEX9 1081 aaKnown RBP16.15■□□□□ 0.18
TPM3-219ENST00000509409 ERCC4Q92889 916 aaPredicted RBP16.15■□□□□ 0.18
TPM3-219ENST00000509409 HESX1Q9UBX0 185 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 ANGPTL2Q9UKU9 493 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 HCN2Q9UL51 889 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 KLKB1P03952 638 aa16.14■□□□□ 0.17
TPM3-219ENST00000509409 CYBBP04839 570 aa16.14■□□□□ 0.17
TPM3-219ENST00000509409 DPP6P42658 865 aa16.14■□□□□ 0.17
TPM3-219ENST00000509409 NOVA1P51513 510 aaKnown RBP16.14■□□□□ 0.17
TPM3-219ENST00000509409 YWHAGP61981 247 aaKnown RBP eCLIP16.14■□□□□ 0.17
TPM3-219ENST00000509409 LMAN2Q12907 356 aa16.14■□□□□ 0.17
TPM3-219ENST00000509409 LRMPQ12912 555 aa16.14■□□□□ 0.17
TPM3-219ENST00000509409 STIM1Q13586 685 aa16.14■□□□□ 0.17
TPM3-219ENST00000509409 CUL2Q13617 745 aa16.14■□□□□ 0.17
TPM3-219ENST00000509409 GOLGA7BQ2TAP0 167 aa16.14■□□□□ 0.17
TPM3-219ENST00000509409 SGO2Q562F6 1265 aa16.14■□□□□ 0.17
TPM3-219ENST00000509409 SPDYCQ5MJ68 293 aa16.14■□□□□ 0.17
TPM3-219ENST00000509409 ISM2Q6H9L7 571 aa16.14■□□□□ 0.17
TPM3-219ENST00000509409 DENND1CQ8IV53 801 aa16.14■□□□□ 0.17
TPM3-219ENST00000509409 GTPBP4Q9BZE4 634 aaKnown RBP16.14■□□□□ 0.17
TPM3-219ENST00000509409 FAM124BQ9H5Z6 455 aaPredicted RBP16.14■□□□□ 0.17
TPM3-219ENST00000509409 LRRC4Q9HBW1 653 aa16.14■□□□□ 0.17
TPM3-219ENST00000509409 CACNA2D2Q9NY47 1150 aa16.14■□□□□ 0.17
TPM3-219ENST00000509409 MARCH2Q9P0N8 246 aa16.14■□□□□ 0.17
TPM3-219ENST00000509409 CALCOCO1Q9P1Z2 691 aa16.14■□□□□ 0.17
TPM3-219ENST00000509409 ARMCX3Q9UH62 379 aaPredicted RBP16.14■□□□□ 0.17
TPM3-219ENST00000509409 RAD54BQ9Y620 910 aa16.14■□□□□ 0.17
TPM3-219ENST00000509409 MYH10P35580 1976 aa16.13■□□□□ 0.17
TPM3-219ENST00000509409 EML5Q05BV3 1969 aa16.13■□□□□ 0.17
TPM3-219ENST00000509409 A0A1W2PQF6 199 aa16.13■□□□□ 0.17
TPM3-219ENST00000509409 ZNF217O75362 1048 aa16.13■□□□□ 0.17
TPM3-219ENST00000509409 ZBED1O96006 694 aa16.13■□□□□ 0.17
TPM3-219ENST00000509409 ITPKAP23677 461 aa16.13■□□□□ 0.17
TPM3-219ENST00000509409 PMS1P54277 932 aaKnown RBP16.13■□□□□ 0.17
TPM3-219ENST00000509409 NUCB2P80303 420 aa16.13■□□□□ 0.17
TPM3-219ENST00000509409 COBLL1Q53SF7 1204 aa16.13■□□□□ 0.17
TPM3-219ENST00000509409 RAB41Q5JT25 222 aa16.13■□□□□ 0.17
TPM3-219ENST00000509409 UBA3Q8TBC4 463 aa16.13■□□□□ 0.17
TPM3-219ENST00000509409 NDRG1Q92597 394 aaKnown RBP16.13■□□□□ 0.17
TPM3-219ENST00000509409 IPO9Q96P70 1041 aaKnown RBP16.13■□□□□ 0.17
TPM3-219ENST00000509409 ULBP1Q9BZM6 244 aa16.13■□□□□ 0.17
TPM3-219ENST00000509409 TMEM74BQ9NUR3 256 aa16.13■□□□□ 0.17
TPM3-219ENST00000509409 EVLQ9UI08 416 aaPredicted RBP16.13■□□□□ 0.17
TPM3-219ENST00000509409 FBXO10Q9UK96 956 aa16.13■□□□□ 0.17
TPM3-219ENST00000509409 TSPAN16Q9UKR8 245 aa16.13■□□□□ 0.17
TPM3-219ENST00000509409 AGO1Q9UL18 857 aaKnown RBP16.13■□□□□ 0.17
TPM3-219ENST00000509409 CYP8B1Q9UNU6 501 aa16.13■□□□□ 0.17
TPM3-219ENST00000509409 ATXN2Q99700 1313 aaKnown RBP16.13■□□□□ 0.17
TPM3-219ENST00000509409 MYO16Q9Y6X6 1858 aa16.12■□□□□ 0.17
TPM3-219ENST00000509409 TRIM49BA6NDI0 452 aa16.12■□□□□ 0.17
TPM3-219ENST00000509409 WASH3PC4AMC7 463 aa16.12■□□□□ 0.17
TPM3-219ENST00000509409 GFRA2O00451 464 aa16.12■□□□□ 0.17
TPM3-219ENST00000509409 CDX4O14627 284 aaPredicted RBP16.12■□□□□ 0.17
TPM3-219ENST00000509409 NDUFS2O75306 463 aa16.12■□□□□ 0.17
TPM3-219ENST00000509409 CFIP05156 583 aa16.12■□□□□ 0.17
TPM3-219ENST00000509409 NDUFV2P19404 249 aa16.12■□□□□ 0.17
TPM3-219ENST00000509409 PMLP29590 882 aa16.12■□□□□ 0.17
TPM3-219ENST00000509409 MAPK8P45983 427 aa16.12■□□□□ 0.17
TPM3-219ENST00000509409 ATXN3P54252 364 aaPredicted RBP16.12■□□□□ 0.17
TPM3-219ENST00000509409 BCAT1P54687 386 aa16.12■□□□□ 0.17
TPM3-219ENST00000509409 LRRC63Q05C16 580 aa16.12■□□□□ 0.17
TPM3-219ENST00000509409 PDE4CQ08493 712 aa16.12■□□□□ 0.17
TPM3-219ENST00000509409 SH3PXD2AQ5TCZ1 1133 aa16.12■□□□□ 0.17
TPM3-219ENST00000509409 KIAA1211LQ6NV74 962 aa16.12■□□□□ 0.17
TPM3-219ENST00000509409 KIAA1324Q6UXG2 1013 aaKnown RBP16.12■□□□□ 0.17
TPM3-219ENST00000509409 ENGASEQ8NFI3 743 aa16.12■□□□□ 0.17
TPM3-219ENST00000509409 DDI1Q8WTU0 396 aa16.12■□□□□ 0.17
TPM3-219ENST00000509409 RNF139Q8WU17 664 aa16.12■□□□□ 0.17
TPM3-219ENST00000509409 UCMAQ8WVF2 138 aa16.12■□□□□ 0.17
TPM3-219ENST00000509409 GABRG3Q99928 467 aa16.12■□□□□ 0.17
TPM3-219ENST00000509409 METTL14Q9HCE5 456 aaKnown RBP16.12■□□□□ 0.17
TPM3-219ENST00000509409 COQ4Q9Y3A0 265 aa16.12■□□□□ 0.17
TPM3-219ENST00000509409 TPRP12270 2363 aaKnown RBP16.12■□□□□ 0.17
TPM3-219ENST00000509409 CNOT1A5YKK6 2376 aaKnown RBP16.11■□□□□ 0.17
TPM3-219ENST00000509409 IGHV1OR15-9A0A0B4J2B8 117 aa16.11■□□□□ 0.17
TPM3-219ENST00000509409 TULP2O00295 520 aa16.11■□□□□ 0.17
TPM3-219ENST00000509409 PSMA7O14818 248 aa16.11■□□□□ 0.17
TPM3-219ENST00000509409 GIPC1O14908 333 aa16.11■□□□□ 0.17
TPM3-219ENST00000509409 XPO1O14980 1071 aaKnown RBP16.11■□□□□ 0.17
TPM3-219ENST00000509409 VDRP11473 427 aa16.11■□□□□ 0.17
TPM3-219ENST00000509409 TBXAS1P24557 533 aaPredicted RBP16.11■□□□□ 0.17
TPM3-219ENST00000509409 ZNF33AQ06730 810 aa16.11■□□□□ 0.17
TPM3-219ENST00000509409 BST2Q10589 180 aaKnown RBP16.11■□□□□ 0.17
TPM3-219ENST00000509409 STARD3Q14849 445 aa16.11■□□□□ 0.17
TPM3-219ENST00000509409 DUOXA1Q1HG43 343 aa16.11■□□□□ 0.17
TPM3-219ENST00000509409 CCDC40Q4G0X9 1142 aa16.11■□□□□ 0.17
TPM3-219ENST00000509409 FYB2Q5VWT5 728 aa16.11■□□□□ 0.17
TPM3-219ENST00000509409 PM20D1Q6GTS8 502 aa16.11■□□□□ 0.17
TPM3-219ENST00000509409 FMNL3Q8IVF7 1028 aa16.11■□□□□ 0.17
TPM3-219ENST00000509409 ZC3H3Q8IXZ2 948 aaKnown RBP16.11■□□□□ 0.17
TPM3-219ENST00000509409 CEP76Q8TAP6 659 aa16.11■□□□□ 0.17
TPM3-219ENST00000509409 TIGD1Q96MW7 591 aa16.11■□□□□ 0.17
TPM3-219ENST00000509409 SLC6A17Q9H1V8 727 aa16.11■□□□□ 0.17
TPM3-219ENST00000509409 OLA1Q9NTK5 396 aaKnown RBP16.11■□□□□ 0.17
TPM3-219ENST00000509409 PILRBQ9UKJ0 227 aa16.11■□□□□ 0.17
TPM3-219ENST00000509409 KIAA1257Q9ULG3 409 aa16.11■□□□□ 0.17
TPM3-219ENST00000509409 PCDHB4Q9Y5E5 795 aa16.11■□□□□ 0.17
TPM3-219ENST00000509409 STON1Q9Y6Q2 735 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms