RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 FYB1O15117 783 aa2.58□□□□□ -2
XRCC4-204ENST00000509268 LDLRP01130 860 aa2.58□□□□□ -2
XRCC4-204ENST00000509268 HDCP19113 662 aa2.58□□□□□ -2
XRCC4-204ENST00000509268 HOXA7P31268 230 aaPredicted RBP2.58□□□□□ -2
XRCC4-204ENST00000509268 GNALP38405 381 aa2.58□□□□□ -2
XRCC4-204ENST00000509268 ADKP55263 362 aaKnown RBP2.58□□□□□ -2
XRCC4-204ENST00000509268 DLX5P56178 289 aa2.58□□□□□ -2
XRCC4-204ENST00000509268 TIRAPP58753 221 aa2.58□□□□□ -2
XRCC4-204ENST00000509268 ROR2Q01974 943 aaKnown RBP2.58□□□□□ -2
XRCC4-204ENST00000509268 CRYZQ08257 329 aaKnown RBP2.58□□□□□ -2
XRCC4-204ENST00000509268 KPNB1Q14974 876 aaKnown RBP2.58□□□□□ -2
XRCC4-204ENST00000509268 DLGAP5Q15398 846 aa2.58□□□□□ -2
XRCC4-204ENST00000509268 UAP1L1Q3KQV9 507 aa2.58□□□□□ -2
XRCC4-204ENST00000509268 CT47A1Q5JQC4 288 aaPredicted RBP2.58□□□□□ -2
XRCC4-204ENST00000509268 BSPRYQ5W0U4 402 aa2.58□□□□□ -2
XRCC4-204ENST00000509268 WBP2NLQ6ICG8 309 aa2.58□□□□□ -2
XRCC4-204ENST00000509268 LHFPL2Q6ZUX7 228 aa2.58□□□□□ -2
XRCC4-204ENST00000509268 COG1Q8WTW3 980 aa2.58□□□□□ -2
XRCC4-204ENST00000509268 TMEM171Q8WVE6 324 aa2.58□□□□□ -2
XRCC4-204ENST00000509268 SLC39A13Q96H72 371 aa2.58□□□□□ -2
XRCC4-204ENST00000509268 RPS6KC1Q96S38 1066 aa2.58□□□□□ -2
XRCC4-204ENST00000509268 GBA2Q9HCG7 927 aaPredicted RBP2.58□□□□□ -2
XRCC4-204ENST00000509268 AGO4Q9HCK5 861 aaKnown RBP2.58□□□□□ -2
XRCC4-204ENST00000509268 THSD1Q9NS62 852 aa2.58□□□□□ -2
XRCC4-204ENST00000509268 ARL8BQ9NVJ2 186 aa2.58□□□□□ -2
XRCC4-204ENST00000509268 GEMIN8Q9NWZ8 242 aaKnown RBP2.58□□□□□ -2
XRCC4-204ENST00000509268 SEMA5BQ9P283 1151 aa2.58□□□□□ -2
XRCC4-204ENST00000509268 ATP8A1Q9Y2Q0 1164 aa2.58□□□□□ -2
XRCC4-204ENST00000509268 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.57□□□□□ -2
XRCC4-204ENST00000509268 SLC22A23A1A5C7 686 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 PPP1R3DO95685 299 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 TFEBP19484 476 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 SOX8P57073 446 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 COASYQ13057 564 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 BIRC2Q13490 618 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 UBE4AQ14139 1066 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 NFE2Q16621 373 aaPredicted RBP2.57□□□□□ -2
XRCC4-204ENST00000509268 FAM83HQ6ZRV2 1179 aaPredicted RBP2.57□□□□□ -2
XRCC4-204ENST00000509268 SPARTQ8N0X7 666 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 BPIFB1Q8TDL5 484 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 PIGKQ92643 395 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 FAXDC2Q96IV6 333 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 VN1R3Q9BXE9 311 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 MLXIPLQ9NP71 852 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 BCCIPQ9P287 314 aaKnown RBP eCLIP2.57□□□□□ -2
XRCC4-204ENST00000509268 SERPINB13Q9UIV8 391 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 TP53BP1Q12888 1972 aaPredicted RBP2.57□□□□□ -2
XRCC4-204ENST00000509268 KIR2DS5A0A0G2JLQ3 304 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 SRRM3A6NNA2 597 aaPredicted RBP2.57□□□□□ -2
XRCC4-204ENST00000509268 KIR2DS3K7RE56 304 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 SLC16A5O15375 505 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 KCNQ3O43525 872 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 TSPAN6O43657 245 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 ALDH1L1O75891 902 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 PAX3P23760 479 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 CNGA1P29973 690 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 MTHFSP49914 203 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 UCP3P55916 312 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 KRT85P78386 507 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 RALBP1Q15311 655 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 ZRSR1Q15695 479 aaKnown RBP2.57□□□□□ -2
XRCC4-204ENST00000509268 CCSAPQ6IQ19 270 aaPredicted RBP2.57□□□□□ -2
XRCC4-204ENST00000509268 DSTYKQ6XUX3 929 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 RBM44Q6ZP01 1051 aaKnown RBP2.57□□□□□ -2
XRCC4-204ENST00000509268 C16orf82Q7Z2V1 217 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 DDX42Q86XP3 938 aaKnown RBP eCLIP2.57□□□□□ -2
XRCC4-204ENST00000509268 WDR75Q8IWA0 830 aaKnown RBP2.57□□□□□ -2
XRCC4-204ENST00000509268 PNPLA1Q8N8W4 532 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 CCDC136Q96JN2 1154 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 TASP1Q9H6P5 420 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 ZSCAN32Q9NX65 697 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 TCEAL9Q9UHQ7 104 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 MRFAP1Q9Y605 127 aa2.57□□□□□ -2
XRCC4-204ENST00000509268 PCDHGA12O60330 932 aa2.56□□□□□ -2
XRCC4-204ENST00000509268 UGDHO60701 494 aa2.56□□□□□ -2
XRCC4-204ENST00000509268 IFNA2P01563 188 aa2.56□□□□□ -2
XRCC4-204ENST00000509268 IGLV2-11P01706 119 aa2.56□□□□□ -2
XRCC4-204ENST00000509268 SLC11A2P49281 568 aa2.56□□□□□ -2
XRCC4-204ENST00000509268 MCL1Q07820 350 aa2.56□□□□□ -2
XRCC4-204ENST00000509268 FAM50AQ14320 339 aaKnown RBP2.56□□□□□ -2
XRCC4-204ENST00000509268 TTF1Q15361 905 aaPredicted RBP2.56□□□□□ -2
XRCC4-204ENST00000509268 PIK3CD-AS1Q5SR53 167 aa2.56□□□□□ -2
XRCC4-204ENST00000509268 C9orf57Q5W0N0 161 aa2.56□□□□□ -2
XRCC4-204ENST00000509268 TTLL5Q6EMB2 1281 aa2.56□□□□□ -2
XRCC4-204ENST00000509268 DUX5Q96PT3 197 aa2.56□□□□□ -2
XRCC4-204ENST00000509268 EGLN1Q9GZT9 426 aa2.56□□□□□ -2
XRCC4-204ENST00000509268 UBA5Q9GZZ9 404 aa2.56□□□□□ -2
XRCC4-204ENST00000509268 MOV10Q9HCE1 1003 aaKnown RBP2.56□□□□□ -2
XRCC4-204ENST00000509268 CHST12Q9NRB3 414 aa2.56□□□□□ -2
XRCC4-204ENST00000509268 MAGED2Q9UNF1 606 aaPredicted RBP2.56□□□□□ -2
XRCC4-204ENST00000509268 PCDHGA9Q9Y5G4 932 aaKnown RBP2.56□□□□□ -2
XRCC4-204ENST00000509268 PCDHGA8Q9Y5G5 932 aa2.56□□□□□ -2
XRCC4-204ENST00000509268 PCDHGA7Q9Y5G6 932 aa2.56□□□□□ -2
XRCC4-204ENST00000509268 PCDHGA6Q9Y5G7 932 aa2.56□□□□□ -2
XRCC4-204ENST00000509268 PCDHGA3Q9Y5H0 932 aa2.56□□□□□ -2
XRCC4-204ENST00000509268 SHTN1A0MZ66 631 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 OR6C75A6NL08 312 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 A8MVJ9 347 aa2.55□□□□□ -2
XRCC4-204ENST00000509268 XPOTO43592 962 aaKnown RBP2.55□□□□□ -2
XRCC4-204ENST00000509268 SCGB1D2O95969 90 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms