RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 SMAD1Q15797 465 aaKnown RBP9.92□□□□□ -0.82
NEDD9-211ENST00000508546 PTPRNQ16849 979 aa9.92□□□□□ -0.82
NEDD9-211ENST00000508546 TPGS1Q6ZTW0 290 aa9.92□□□□□ -0.82
NEDD9-211ENST00000508546 PAQR9Q6ZVX9 377 aa9.92□□□□□ -0.82
NEDD9-211ENST00000508546 ERLEC1Q96DZ1 483 aa9.92□□□□□ -0.82
NEDD9-211ENST00000508546 NUP58Q9BVL2 599 aa9.92□□□□□ -0.82
NEDD9-211ENST00000508546 MIR1-1HGQ9H1L0 117 aa9.92□□□□□ -0.82
NEDD9-211ENST00000508546 FBXO44Q9H4M3 255 aa9.92□□□□□ -0.82
NEDD9-211ENST00000508546 TLR8Q9NR97 1041 aaKnown RBP9.92□□□□□ -0.82
NEDD9-211ENST00000508546 PANK4Q9NVE7 773 aa9.92□□□□□ -0.82
NEDD9-211ENST00000508546 HSPBP1Q9NZL4 362 aa9.92□□□□□ -0.82
NEDD9-211ENST00000508546 THAP10Q9P2Z0 257 aaPredicted RBP9.92□□□□□ -0.82
NEDD9-211ENST00000508546 SLC27A6Q9Y2P4 619 aa9.92□□□□□ -0.82
NEDD9-211ENST00000508546 ARID1BQ8NFD5 2236 aaPredicted RBP9.92□□□□□ -0.82
NEDD9-211ENST00000508546 NOTCH2Q04721 2471 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 CAPN8A6NHC0 703 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 TNFSF14O43557 240 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 TLX3O43711 291 aaPredicted RBP9.91□□□□□ -0.82
NEDD9-211ENST00000508546 DLATP10515 647 aaKnown RBP9.91□□□□□ -0.82
NEDD9-211ENST00000508546 TNNI1P19237 187 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 ACO1P21399 889 aaKnown RBP9.91□□□□□ -0.82
NEDD9-211ENST00000508546 ATICP31939 592 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 ATP5C1P36542 298 aaKnown RBP9.91□□□□□ -0.82
NEDD9-211ENST00000508546 PGFP49763 221 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 PSMD6Q15008 389 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 E2F5Q15329 346 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 KLHDC10Q6PID8 442 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 Q6ZNB5 142 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 STXBP4Q6ZWJ1 553 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 TMPRSS6Q8IU80 811 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 FUKQ8N0W3 1084 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 SIPA1Q96FS4 1042 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 TNIP3Q96KP6 325 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 CGRRF1Q99675 332 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 TRIM9Q9C026 710 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 XYLT2Q9H1B5 865 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 VRTNQ9H8Y1 702 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 CSNK1G1Q9HCP0 422 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 CYLDQ9NQC7 956 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 EIF2B4Q9UI10 523 aaKnown RBP9.91□□□□□ -0.82
NEDD9-211ENST00000508546 BTBD3Q9Y2F9 522 aa9.91□□□□□ -0.82
NEDD9-211ENST00000508546 PLXNA2O75051 1894 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 A0A1B0GVT2 93 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 EIF3DO15371 548 aaKnown RBP eCLIP9.9□□□□□ -0.82
NEDD9-211ENST00000508546 PAPSS1O43252 624 aaPredicted RBP9.9□□□□□ -0.82
NEDD9-211ENST00000508546 PCDHGA12O60330 932 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 AP1G2O75843 785 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 KRT38O76015 456 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 TBX18O95935 607 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 C7P10643 843 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 HOXD13P35453 343 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 TXLNAP40222 546 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 EIF2S3P41091 472 aaKnown RBP9.9□□□□□ -0.82
NEDD9-211ENST00000508546 IL12RB1P42701 662 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 GRK6P43250 576 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 AFF3P51826 1226 aaKnown RBP9.9□□□□□ -0.82
NEDD9-211ENST00000508546 CYP24A1Q07973 514 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 TRPC3Q13507 836 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 SNRNP35Q16560 246 aaKnown RBP9.9□□□□□ -0.82
NEDD9-211ENST00000508546 CCDC73Q6ZRK6 1079 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 GPR155Q7Z3F1 870 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 FMNL3Q8IVF7 1028 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 CCDC65Q8IXS2 484 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 ZMIZ2Q8NF64 920 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 ENGASEQ8NFI3 743 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 UCMAQ8WVF2 138 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 PRCCQ92733 491 aaPredicted RBP9.9□□□□□ -0.82
NEDD9-211ENST00000508546 SYAP1Q96A49 352 aaPredicted RBP9.9□□□□□ -0.82
NEDD9-211ENST00000508546 TMX3Q96JJ7 454 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 SMOQ99835 787 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 MED10Q9BTT4 135 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 OSGEPQ9NPF4 335 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 KRT82Q9NSB4 513 aa9.9□□□□□ -0.82
NEDD9-211ENST00000508546 NXF1Q9UBU9 619 aaKnown RBP9.9□□□□□ -0.82
NEDD9-211ENST00000508546 FBXO2Q9UK22 296 aaPredicted RBP9.9□□□□□ -0.82
NEDD9-211ENST00000508546 SRPRBQ9Y5M8 271 aaKnown RBP9.9□□□□□ -0.82
NEDD9-211ENST00000508546 GOLGA8CPA6NN73 597 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 B8ZZF3 427 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 ERVH48-1M5A8F1 160 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 SLC28A2O43868 658 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 SYNCRIPO60506 623 aaKnown RBP9.89□□□□□ -0.83
NEDD9-211ENST00000508546 BEST1O76090 585 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 PENKP01210 267 aaPredicted RBP9.89□□□□□ -0.83
NEDD9-211ENST00000508546 ACADMP11310 421 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 HLA-EP13747 358 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 STAT6P42226 847 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 PLA2G4AP47712 749 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 GRIA4P48058 902 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 CSNK1EP49674 416 aaKnown RBP9.89□□□□□ -0.83
NEDD9-211ENST00000508546 COPAP53621 1224 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 MFAP3P55082 362 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 MYL6P60660 151 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 SNRPFP62306 86 aaKnown RBP9.89□□□□□ -0.83
NEDD9-211ENST00000508546 ORC1Q13415 861 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 EIF4HQ15056 248 aaKnown RBP9.89□□□□□ -0.83
NEDD9-211ENST00000508546 TEAD4Q15561 434 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 KIF19Q2TAC6 998 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 COLEC12Q5KU26 742 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 TMPRSS12Q86WS5 348 aa9.89□□□□□ -0.83
NEDD9-211ENST00000508546 ZNF276Q8N554 614 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms