RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 LCLAT1Q6UWP7 414 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 TTC39CQ8N584 583 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 TERB1Q8NA31 727 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 SLC35F5Q8WV83 523 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 EDEM1Q92611 657 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 BBS2Q9BXC9 721 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 INTS2Q9H0H0 1204 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 ARRDC1-AS1Q9H2J1 176 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 FAM124BQ9H5Z6 455 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 CD248Q9HCU0 757 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 SEMA4GQ9NTN9 838 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 DNAJC17Q9NVM6 304 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 MARK1Q9P0L2 795 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 SFMBT1Q9UHJ3 866 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 ANGPTL2Q9UKU9 493 aa17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.55■□□□□ 0.4
PDLIM7-215ENST00000506161 CKAP5Q14008 2032 aa17.54■□□□□ 0.4
PDLIM7-215ENST00000506161 MSI1O43347 362 aaKnown RBP17.54■□□□□ 0.4
PDLIM7-215ENST00000506161 AFPP02771 609 aaKnown RBP17.54■□□□□ 0.4
PDLIM7-215ENST00000506161 CCDC192P0DO97 292 aa17.54■□□□□ 0.4
PDLIM7-215ENST00000506161 LCP1P13796 627 aa17.54■□□□□ 0.4
PDLIM7-215ENST00000506161 TRIM21P19474 475 aaKnown RBP17.54■□□□□ 0.4
PDLIM7-215ENST00000506161 KCNA4P22459 653 aa17.54■□□□□ 0.4
PDLIM7-215ENST00000506161 CORO1AP31146 461 aaKnown RBP17.54■□□□□ 0.4
PDLIM7-215ENST00000506161 MRPS21P82921 87 aaKnown RBP17.54■□□□□ 0.4
PDLIM7-215ENST00000506161 C10orf76Q5T2E6 689 aa17.54■□□□□ 0.4
PDLIM7-215ENST00000506161 FYB2Q5VWT5 728 aa17.54■□□□□ 0.4
PDLIM7-215ENST00000506161 TRIML1Q8N9V2 468 aa17.54■□□□□ 0.4
PDLIM7-215ENST00000506161 TSTD1Q8NFU3 115 aa17.54■□□□□ 0.4
PDLIM7-215ENST00000506161 RLN3Q8WXF3 142 aa17.54■□□□□ 0.4
PDLIM7-215ENST00000506161 CNOT6LQ96LI5 555 aaKnown RBP17.54■□□□□ 0.4
PDLIM7-215ENST00000506161 CRACR2AQ9BSW2 395 aa17.54■□□□□ 0.4
PDLIM7-215ENST00000506161 MARCH2Q9P0N8 246 aa17.54■□□□□ 0.4
PDLIM7-215ENST00000506161 EBF1Q9UH73 591 aa17.54■□□□□ 0.4
PDLIM7-215ENST00000506161 RWDD2AQ9UIY3 292 aa17.54■□□□□ 0.4
PDLIM7-215ENST00000506161 AGO1Q9UL18 857 aaKnown RBP17.54■□□□□ 0.4
PDLIM7-215ENST00000506161 SLC12A8A0AV02 714 aa17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 TBC1D3BA6NDS4 549 aa17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 BECN2A8MW95 431 aa17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 P4HA2O15460 535 aa17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 LRP3O75074 770 aa17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 EPN2O95208 641 aa17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 PAEPP09466 180 aa17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 RALAP11233 206 aa17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 SLC9A1P19634 815 aa17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 TNFRSF4P43489 277 aa17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 PSEN1P49768 467 aa17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 DAOAP59103 153 aa17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 DENND1CQ8IV53 801 aa17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 KCTD13Q8WZ19 329 aa17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 ZC3H10Q96K80 434 aaKnown RBP17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 CLSTN2Q9H4D0 955 aa17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 CD93Q9NPY3 652 aa17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 DEC1Q9P2X7 70 aa17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 TJP2Q9UDY2 1190 aa17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 CYTH4Q9UIA0 394 aa17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 FBXO10Q9UK96 956 aa17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 CNTN6Q9UQ52 1028 aa17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.53■□□□□ 0.4
PDLIM7-215ENST00000506161 M0QYV0 167 aa17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 SGSHP51688 502 aa17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 YWHAEP62258 255 aaKnown RBP17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 GCNT1Q02742 428 aa17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 CNGA2Q16280 664 aa17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 DPCR1Q3MIW9 517 aa17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 BSPRYQ5W0U4 402 aa17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 GRAMD4Q6IC98 578 aa17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 TCEAL6Q6IPX3 200 aa17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 KIAA1211LQ6NV74 962 aa17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 DPY19L2P1Q6NXN4 242 aa17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 DENND1BQ6P3S1 775 aa17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 PRR23CQ6ZRP0 262 aa17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 CACNA2D4Q7Z3S7 1137 aa17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 FMNL3Q8IVF7 1028 aa17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 ZNF513Q8N8E2 541 aaPredicted RBP17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 OLIG1Q8TAK6 271 aa17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 DDX1Q92499 740 aaKnown RBP17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 TCEAL3Q969E4 200 aa17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 EXOC4Q96A65 974 aa17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 LRRC4Q9HBW1 653 aa17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 HESX1Q9UBX0 185 aa17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 MBD1Q9UIS9 605 aaPredicted RBP17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 LSM7Q9UK45 103 aaKnown RBP17.52■□□□□ 0.4
PDLIM7-215ENST00000506161 A0A1W2PQF6 199 aa17.51■□□□□ 0.39
PDLIM7-215ENST00000506161 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.51■□□□□ 0.39
PDLIM7-215ENST00000506161 WASH3PC4AMC7 463 aa17.51■□□□□ 0.39
PDLIM7-215ENST00000506161 GFRA2O00451 464 aa17.51■□□□□ 0.39
PDLIM7-215ENST00000506161 PENKP01210 267 aaPredicted RBP17.51■□□□□ 0.39
PDLIM7-215ENST00000506161 FYNP06241 537 aa17.51■□□□□ 0.39
PDLIM7-215ENST00000506161 SETSIPP0DME0 302 aa17.51■□□□□ 0.39
PDLIM7-215ENST00000506161 TRIP4Q15650 581 aaPredicted RBP17.51■□□□□ 0.39
PDLIM7-215ENST00000506161 CSRP2Q16527 193 aa17.51■□□□□ 0.39
PDLIM7-215ENST00000506161 GEN1Q17RS7 908 aa17.51■□□□□ 0.39
PDLIM7-215ENST00000506161 PLA2G2CQ5R387 149 aa17.51■□□□□ 0.39
PDLIM7-215ENST00000506161 BTBD8Q5XKL5 378 aa17.51■□□□□ 0.39
PDLIM7-215ENST00000506161 FAM217AQ8IXS0 508 aa17.51■□□□□ 0.39
PDLIM7-215ENST00000506161 MYEOVQ96EZ4 313 aa17.51■□□□□ 0.39
PDLIM7-215ENST00000506161 SLC6A17Q9H1V8 727 aa17.51■□□□□ 0.39
PDLIM7-215ENST00000506161 SIX2Q9NPC8 291 aa17.51■□□□□ 0.39
PDLIM7-215ENST00000506161 NYNRINQ9P2P1 1898 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms