RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 TMEM237Q96Q45 408 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 SH3GL2Q99962 352 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 TRIM51Q9BSJ1 452 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 MTG1Q9BT17 334 aaPredicted RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 FTHL17Q9BXU8 183 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 OSBPL6Q9BZF3 934 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 GEMIN8Q9NWZ8 242 aaKnown RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 TRPM5Q9NZQ8 1165 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 DNAJB4Q9UDY4 337 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 PCSK1NQ9UHG2 260 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 LGALS13Q9UHV8 139 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 TAF6LQ9Y6J9 622 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 SHOX2O60902 331 aaPredicted RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 EIF2S1P05198 315 aaKnown RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 FGFR4P22455 802 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 KRT20P35900 424 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 CLK2P49760 499 aaKnown RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 ZNF143P52747 638 aaPredicted RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 RAD23AP54725 363 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 DEFA1P59665 94 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 DEFA3P59666 94 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 LRRC74AQ0VAA2 488 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 CSTF3Q12996 717 aaKnown RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 SLC12A1Q13621 1099 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 CYP1B1Q16678 543 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 ZCWPW2Q504Y3 356 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 HP1BP3Q5SSJ5 553 aaPredicted RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 STXBP5Q5T5C0 1151 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 CACHD1Q5VU97 1274 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 SEL1L3Q68CR1 1132 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 ZNF280DQ6N043 979 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 CAPN12Q6ZSI9 719 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 FAM47EQ6ZV65 393 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 BBS7Q8IWZ6 715 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 TOP6BLQ8N6T0 577 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 RNF169Q8NCN4 708 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 SNX19Q92543 992 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 TATDN2Q93075 761 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 LENG9Q96B70 501 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 ERP27Q96DN0 273 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 ASIC4Q96FT7 647 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 ZCCHC2Q9C0B9 1178 aaKnown RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 FAM49AQ9H0Q0 323 aaPredicted RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 ZCCHC17Q9NP64 241 aaKnown RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 EIF2B3Q9NR50 452 aaKnown RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 VPS45Q9NRW7 570 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 TBC1D23Q9NUY8 699 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 TEKT2Q9UIF3 430 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 PKP3Q9Y446 797 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 COL4A4P53420 1690 aaPredicted RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 A0A087WWV3 80 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 BBIP1A8MTZ0 92 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 TRIM49D1C9J1S8 452 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 ALOX15BO15296 676 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 CD3EAPO15446 510 aaKnown RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 TLR2O60603 784 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 TRIM13O60858 407 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 PFDN1O60925 122 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 CAND2O75155 1236 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 KRT8P05787 483 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 C4BPBP20851 252 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 MAP4P27816 1152 aaKnown RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 CCR1P32246 355 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 RFC1P35251 1148 aaPredicted RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 GRM5P41594 1212 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 SCTRP47872 440 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 CLCN5P51795 746 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 DSG1Q02413 1049 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 CDC16Q13042 620 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 CUL3Q13618 768 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 KRT72Q14CN4 511 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 TTC19Q6DKK2 380 aaPredicted RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 TXNDC11Q6PKC3 985 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 CATSPERGQ6ZRH7 1159 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 KIAA0408Q6ZU52 694 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 LONP2Q86WA8 852 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 CROCCP3Q8IVE0 287 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 ZC3H3Q8IXZ2 948 aaKnown RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 SETD9Q8NE22 299 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 SLC30A5Q8TAD4 765 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 FBXO25Q8TCJ0 367 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 UCMAQ8WVF2 138 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 REPS1Q96D71 796 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 EEF2KMTQ96G04 330 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 NR1H4Q96RI1 486 aaPredicted RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 PAFAH2Q99487 392 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 SLC25A23Q9BV35 468 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 ACSS3Q9H6R3 686 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 WDCPQ9H6R7 721 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 NOD2Q9HC29 1040 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 PDGFCQ9NRA1 345 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 METTL5Q9NRN9 209 aaKnown RBP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 BTBD7Q9P203 1132 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 ZNF510Q9Y2H8 683 aa4.89□□□□□ -1.63
NDFIP1-202ENST00000503388 LTBP3Q9NS15 1303 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 NPHP3-ACAD11A0A0J9YXS1 232 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 ESYT3A0FGR9 886 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 KLRG2A4D1S0 409 aaPredicted RBP4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 MEIS2O14770 477 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms