RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 ADH1AP07327 375 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 POU2F2P09086 479 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 TCF4P15884 667 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 PFKLP17858 780 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 L1CAMP32004 1257 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 ADRA1BP35368 520 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 EPHB4P54760 987 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 SEMA3BQ13214 749 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 XRCC4Q13426 336 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 KRT81Q14533 505 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 DDR2Q16832 855 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 CDO1Q16878 200 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 MGAT5BQ3V5L5 792 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 SYPL2Q5VXT5 272 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 SLC9A4Q6AI14 798 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 TXNRD3NBQ6F5E7 133 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 EMBQ6PCB8 327 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 CCDC137Q6PK04 289 aaKnown RBP9.43□□□□□ -0.9
NR1I3-216ENST00000502848 C4orf22Q6V702 233 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 CCDC149Q6ZUS6 474 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 SCD5Q86SK9 330 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 ITIH5Q86UX2 942 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 SCAMP5Q8TAC9 235 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 SLC35B2Q8TB61 432 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 SLC7A14Q8TBB6 771 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 DQX1Q8TE96 717 aaKnown RBP9.43□□□□□ -0.9
NR1I3-216ENST00000502848 RNF139Q8WU17 664 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 HDAC7Q8WUI4 952 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 RNF157Q96PX1 679 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 LRRC1Q9BTT6 524 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 AP1M1Q9BXS5 423 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 EMILIN2Q9BXX0 1053 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 DCLK3Q9C098 648 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 DDX47Q9H0S4 455 aaKnown RBP9.43□□□□□ -0.9
NR1I3-216ENST00000502848 TSPYL1Q9H0U9 437 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 OSBPL2Q9H1P3 480 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 FAM204AQ9H8W3 233 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 GDF3Q9NR23 364 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 FAM114A2Q9NRY5 505 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 DDIT4Q9NX09 232 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 DONSONQ9NYP3 566 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 SMARCAL1Q9NZC9 954 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 CXXC1Q9P0U4 656 aaPredicted RBP9.43□□□□□ -0.9
NR1I3-216ENST00000502848 PCSK1NQ9UHG2 260 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 DPP7Q9UHL4 492 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 TLR6Q9Y2C9 796 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 PTPRSQ13332 1948 aa9.43□□□□□ -0.9
NR1I3-216ENST00000502848 SLC38A8A6NNN8 435 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 SOBPA7XYQ1 873 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 SMAPO00193 183 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 APOL1O14791 398 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 NCAM2O15394 837 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 RAD51CO43502 376 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 LIASO43766 372 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 FGF19O95750 216 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 RHOXF2BP0C7M4 288 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 ATF6P18850 670 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 HOXA9P31269 272 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 HOXC13P31276 330 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 STIP1P31948 543 aaKnown RBP9.42□□□□□ -0.9
NR1I3-216ENST00000502848 CCR1P32246 355 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 ELF1P32519 619 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 GJC1P36383 396 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 ALDH1A3P47895 512 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 VCPP55072 806 aaKnown RBP9.42□□□□□ -0.9
NR1I3-216ENST00000502848 CAV1Q03135 178 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 DUSP4Q13115 394 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 PTK6Q13882 451 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 BYSLQ13895 437 aaKnown RBP9.42□□□□□ -0.9
NR1I3-216ENST00000502848 OASLQ15646 514 aaKnown RBP9.42□□□□□ -0.9
NR1I3-216ENST00000502848 SMTNL2Q2TAL5 461 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 ATP13A4Q4VNC1 1196 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 PABPC1LQ4VXU2 614 aaKnown RBP9.42□□□□□ -0.9
NR1I3-216ENST00000502848 SH3PXD2AQ5TCZ1 1133 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 DAB2IPQ5VWQ8 1189 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 DUPD1Q68J44 220 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 FAM117BQ6P1L5 589 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 SCYL2Q6P3W7 929 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 HFE2Q6ZVN8 426 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 PDZD4Q76G19 769 aaPredicted RBP9.42□□□□□ -0.9
NR1I3-216ENST00000502848 TAC4Q86UU9 113 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 JAMLQ86YT9 394 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 CCDC105Q8IYK2 499 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 CCDC89Q8N998 374 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 BBOF1Q8ND07 529 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 STKLD1Q8NE28 680 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.42□□□□□ -0.9
NR1I3-216ENST00000502848 HSPH1Q92598 858 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 FBXO32Q969P5 355 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 HAUS1Q96CS2 278 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 B3GALT6Q96L58 329 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 C1orf74Q96LT6 269 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 PGLYRP2Q96PD5 576 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 SEPT5Q99719 369 aaPredicted RBP9.42□□□□□ -0.9
NR1I3-216ENST00000502848 RHOXF2Q9BQY4 288 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 ERP44Q9BS26 406 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 CALN1Q9BXU9 219 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 MAK16Q9BXY0 300 aaKnown RBP9.42□□□□□ -0.9
NR1I3-216ENST00000502848 ADAM33Q9BZ11 813 aa9.42□□□□□ -0.9
NR1I3-216ENST00000502848 FOXP3Q9BZS1 431 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms