RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 ZCCHC14Q8WYQ9 949 aaKnown RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 SMARCD2Q92925 531 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 E2F7Q96AV8 911 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 ZNF512Q96ME7 567 aaPredicted RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 ASB16Q96NS5 453 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 EDEM2Q9BV94 578 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 C2orf49Q9BVC5 232 aaPredicted RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 SCNM1Q9BWG6 230 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 SAP130Q9H0E3 1048 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 DHX33Q9H6R0 707 aaKnown RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 C8orf33Q9H7E9 229 aaPredicted RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 ZWILCHQ9H900 591 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 CYP4F11Q9HBI6 524 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 VPS45Q9NRW7 570 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 RBM12Q9NTZ6 932 aaKnown RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 EHD2Q9NZN4 543 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 SNX12Q9UMY4 172 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 LRRC42Q9Y546 428 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 PCDHGA5Q9Y5G8 931 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 DUSP10Q9Y6W6 482 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 SPAG17Q6Q759 2223 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 NOTCH4Q99466 2003 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 PDCD11Q14690 1871 aaKnown RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 CFAP73A6NFT4 308 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 ZSCAN5CA6NGD5 496 aaPredicted RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 SLC38A8A6NNN8 435 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 C4orf47A7E2U8 309 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 A8MUI8 341 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 K7ESF4 209 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 GIPC1O14908 333 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 B3GAT3O94766 335 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 EPN2O95208 641 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 PAPSS2O95340 614 aaPredicted RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 VIMP08670 466 aaKnown RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 NQO1P15559 274 aaKnown RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 GNAZP19086 355 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 YWHABP31946 246 aaKnown RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 HPDP32754 393 aaPredicted RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 KRT9P35527 623 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 HSPA9P38646 679 aaKnown RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 VIPR2P41587 438 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 PXNP49023 591 aaPredicted RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 MLLT6P55198 1093 aaPredicted RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 RIPPLY3P57055 190 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 NLRP5P59047 1200 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 NCALDP61601 193 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 CREB5Q02930 508 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 PPARDQ03181 441 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 GRIN1Q05586 938 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 EMC2Q15006 297 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 TRADDQ15628 312 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 Q4G0T1 1027 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 CCDC122Q5T0U0 273 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 GKAP1Q5VSY0 366 aaPredicted RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 Q6ZS52 159 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 MAEAQ7L5Y9 396 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 HAUS6Q7Z4H7 955 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 APLFQ8IW19 511 aaPredicted RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 FBXL16Q8N461 479 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 TRIML1Q8N9V2 468 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 ZSCAN18Q8TBC5 510 aaPredicted RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 GAB3Q8WWW8 586 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 INSM2Q96T92 566 aaPredicted RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 DNAJC7Q99615 494 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 GPR88Q9GZN0 384 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 SMOC1Q9H4F8 434 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 PCDH12Q9NPG4 1184 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 AVENQ9NQS1 362 aaPredicted RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 ADAM22Q9P0K1 906 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 MTRRQ9UBK8 725 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 LIMA1Q9UHB6 759 aaKnown RBP4.74□□□□□ -1.65
MATR3-202ENST00000502422 NFU1Q9UMS0 254 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 SLC8A2Q9UPR5 921 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 MAPK8IP1Q9UQF2 711 aa4.74□□□□□ -1.65
MATR3-202ENST00000502422 LRRD1A4D1F6 860 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 HEPACAM2A8MVW5 462 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 ADAMTS3O15072 1205 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 PRPF3O43395 683 aaKnown RBP4.73□□□□□ -1.65
MATR3-202ENST00000502422 ATG13O75143 517 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 ATP6V1G1O75348 118 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 MICAL2O94851 1124 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 RARAP10276 462 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 MYL4P12829 197 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 CEACAM1P13688 526 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 ATF2P15336 505 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 PRLRP16471 622 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 FCARP24071 287 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 RAP1GAPP47736 663 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 STX17P56962 302 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 MXRA7P84157 204 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 C19orf57Q0VDD7 668 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 KRT31Q15323 416 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 UAP1Q16222 522 aaPredicted RBP4.73□□□□□ -1.65
MATR3-202ENST00000502422 CMPK2Q5EBM0 449 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 OR52E8Q6IFG1 317 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 PIGWQ7Z7B1 504 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 KBTBD6Q86V97 674 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 RALGPS2Q86X27 583 aaPredicted RBP4.73□□□□□ -1.65
MATR3-202ENST00000502422 SYNPOQ8N3V7 929 aa4.73□□□□□ -1.65
MATR3-202ENST00000502422 TTC8Q8TAM2 541 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms