RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 TMEM8BA6NDV4 472 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 CDX4O14627 284 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 CALUO43852 315 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 ADAM23O75077 832 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 CFIP05156 583 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 IRF1P10914 325 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 HOXB2P14652 356 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 PLA2G4AP47712 749 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 CASP4P49662 377 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 NDST1P52848 882 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 MAP3K7CLP57077 242 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 GFPT1Q06210 699 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 CUL4BQ13620 913 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 MAP7D1Q3KQU3 841 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 ZACNQ401N2 412 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 FOXD4L5Q5VV16 416 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 SLC23A3Q6PIS1 610 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 PAQR9Q6ZVX9 377 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 C12orf40Q86WS4 652 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 BBS7Q8IWZ6 715 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 CHPFQ8IZ52 775 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 FUKQ8N0W3 1084 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 SLC2A14Q8TDB8 520 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 FOXD4L4Q8WXT5 416 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 SNX21Q969T3 373 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 CDK5RAP1Q96SZ6 601 aaKnown RBP11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 BBS2Q9BXC9 721 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 GZF1Q9H116 711 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 CYP3A43Q9HB55 503 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 CSNK1G1Q9HCP0 422 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 DNAJC17Q9NVM6 304 aaKnown RBP11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 SLC6A14Q9UN76 642 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 SCML2Q9UQR0 700 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 ZNF510Q9Y2H8 683 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 PCDHA5Q9Y5H7 936 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 WASF2Q9Y6W5 498 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 HELZP42694 1942 aaKnown RBP11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 EML5Q05BV3 1969 aa11.74□□□□□ -0.53
UBE2D3-211ENST00000502404 UPK3BL1B0FP48 263 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 PATE3B3GLJ2 98 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 UPK3BL2E5RIL1 263 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 NEDD8-MDP1E9PL57 170 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 MAPK13O15264 365 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 F13A1P00488 732 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 NR3C1P04150 777 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 SYPP08247 313 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 KRT13P13646 458 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 HNRNPLP14866 589 aaKnown RBP eCLIP11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 ENGP17813 658 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 PTPRDP23468 1912 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 CASP1P29466 404 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 PIK3CAP42336 1068 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 PTGER3P43115 390 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 MAPK8P45983 427 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 RPL6Q02878 288 aaKnown RBP11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 DHX9Q08211 1270 aaKnown RBP11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 NNTQ13423 1086 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 HNRNPDQ14103 355 aaKnown RBP11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 FOXD4L6Q3SYB3 417 aaPredicted RBP11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 SYCP2LQ5T4T6 812 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 CEP135Q66GS9 1140 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 KLHDC10Q6PID8 442 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 FOXD4L3Q6VB84 417 aaPredicted RBP11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 SV2AQ7L0J3 742 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 ARMCX6Q7L4S7 300 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 SFTPA1Q8IWL2 248 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 HSCBQ8IWL3 235 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 CCDC116Q8IYX3 515 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 TTC39CQ8N584 583 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 HNRNPABQ99729 332 aaKnown RBP11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 SMOQ99835 787 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 NT5C1AQ9BXI3 368 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 KLF16Q9BXK1 252 aaPredicted RBP11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 BACH2Q9BYV9 841 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 FAM124BQ9H5Z6 455 aaPredicted RBP11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 PNPLA8Q9NP80 782 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 CYLDQ9NQC7 956 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 MARK1Q9P0L2 795 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 MBD1Q9UIS9 605 aaPredicted RBP11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 DNMT3LQ9UJW3 386 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 PILRBQ9UKJ0 227 aa11.73□□□□□ -0.53
UBE2D3-211ENST00000502404 CEP295Q9C0D2 2601 aa11.72□□□□□ -0.53
UBE2D3-211ENST00000502404 GFRA2O00451 464 aa11.72□□□□□ -0.53
UBE2D3-211ENST00000502404 GIPC1O14908 333 aa11.72□□□□□ -0.53
UBE2D3-211ENST00000502404 NPC1O15118 1278 aa11.72□□□□□ -0.53
UBE2D3-211ENST00000502404 CACNG3O60359 315 aa11.72□□□□□ -0.53
UBE2D3-211ENST00000502404 NDUFS2O75306 463 aa11.72□□□□□ -0.53
UBE2D3-211ENST00000502404 VNN1O95497 513 aa11.72□□□□□ -0.53
UBE2D3-211ENST00000502404 ASS1P00966 412 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-211ENST00000502404 SERPINF2P08697 491 aa11.72□□□□□ -0.53
UBE2D3-211ENST00000502404 RALAP11233 206 aa11.72□□□□□ -0.53
UBE2D3-211ENST00000502404 CCDC130P13994 396 aa11.72□□□□□ -0.53
UBE2D3-211ENST00000502404 TYRP14679 529 aa11.72□□□□□ -0.53
UBE2D3-211ENST00000502404 GNSP15586 552 aa11.72□□□□□ -0.53
UBE2D3-211ENST00000502404 GABRG2P18507 467 aa11.72□□□□□ -0.53
UBE2D3-211ENST00000502404 RPL13P26373 211 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-211ENST00000502404 VAMP7P51809 220 aa11.72□□□□□ -0.53
UBE2D3-211ENST00000502404 ZNF132P52740 706 aa11.72□□□□□ -0.53
UBE2D3-211ENST00000502404 ZNF33AQ06730 810 aa11.72□□□□□ -0.53
UBE2D3-211ENST00000502404 ENPEPQ07075 957 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms