RNA–Protein interactions for RNA: ENST00000498793.5

SCMH1-217, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-217ENST00000498793 KIAA1257Q9ULG3 409 aa12.13□□□□□ -0.47
SCMH1-217ENST00000498793 GOLGA6L7A0A1B0GV03 622 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 CHURC1-FNTBB4DL54 471 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 NEDD8-MDP1E9PL57 170 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 K7EQS6 105 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 K7ESF4 209 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 LAMTOR5O43504 91 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 TSPAN3O60637 253 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 GJB6O95452 261 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 CYP11B1P15538 503 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 CHRNB2P17787 502 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 TFE3P19532 575 aaPredicted RBP12.12□□□□□ -0.47
SCMH1-217ENST00000498793 RPS9P46781 194 aaKnown RBP12.12□□□□□ -0.47
SCMH1-217ENST00000498793 RPL34P49207 117 aaKnown RBP12.12□□□□□ -0.47
SCMH1-217ENST00000498793 FNTBP49356 437 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 NUMBP49757 651 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 ZNF165P49910 485 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 JAM2P57087 298 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 SLC8A3P57103 927 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 UBXN1Q04323 297 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 OTUD1Q5VV17 481 aaPredicted RBP12.12□□□□□ -0.47
SCMH1-217ENST00000498793 E4F1Q66K89 784 aaPredicted RBP12.12□□□□□ -0.47
SCMH1-217ENST00000498793 HTR3DQ70Z44 454 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 ALYREFQ86V81 257 aaKnown RBP12.12□□□□□ -0.47
SCMH1-217ENST00000498793 DDX42Q86XP3 938 aaKnown RBP eCLIP12.12□□□□□ -0.47
SCMH1-217ENST00000498793 ETFBKMTQ8IXQ9 262 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 CCDC33Q8N5R6 958 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 RPLP0P6Q8NHW5 317 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 EPS8L1Q8TE68 723 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 FAM149B1Q96BN6 582 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 NAP1L5Q96NT1 182 aaPredicted RBP12.12□□□□□ -0.47
SCMH1-217ENST00000498793 HHIPQ96QV1 700 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 SPHK2Q9NRA0 654 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 CALCOCO1Q9P1Z2 691 aa12.12□□□□□ -0.47
SCMH1-217ENST00000498793 NOCTQ9UK39 431 aaKnown RBP12.12□□□□□ -0.47
SCMH1-217ENST00000498793 AGO1Q9UL18 857 aaKnown RBP12.12□□□□□ -0.47
SCMH1-217ENST00000498793 PLXND1Q9Y4D7 1925 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 ZNF292O60281 2723 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 SYNJ2BP-COX16A0A087WUM0 186 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 TULP3O75386 442 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 GGCXP38435 758 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 WASP42768 502 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 MRE11P49959 708 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 ARID5AQ03989 594 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 GRSF1Q12849 480 aaKnown RBP eCLIP12.11□□□□□ -0.47
SCMH1-217ENST00000498793 LRRC32Q14392 662 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 STILQ15468 1287 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 C2orf27AQ580R0 203 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 NAA35Q5VZE5 725 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 NADSYN1Q6IA69 706 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 TRNP1Q6NT89 227 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 MSANTD2Q6P1R3 559 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 RFWD3Q6PCD5 774 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 KLHDC10Q6PID8 442 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 DNAAF5Q86Y56 855 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 OLIG1Q8TAK6 271 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 WFDC5Q8TCV5 224 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 MSANTD3Q96H12 275 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 HSFY1Q96LI6 401 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 PCMTD1Q96MG8 357 aaPredicted RBP12.11□□□□□ -0.47
SCMH1-217ENST00000498793 PCDHB18PQ96TA0 734 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 NELL2Q99435 816 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 BBS2Q9BXC9 721 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 COX16Q9P0S2 106 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 PCDHGC3Q9UN70 934 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 LAMA1P25391 3075 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 TNRC6BQ9UPQ9 1833 aaKnown RBP12.11□□□□□ -0.47
SCMH1-217ENST00000498793 SPTBN4Q9H254 2564 aa12.11□□□□□ -0.47
SCMH1-217ENST00000498793 SLC9A3R1O14745 358 aaPredicted RBP12.1□□□□□ -0.47
SCMH1-217ENST00000498793 HOXC11O43248 304 aaPredicted RBP12.1□□□□□ -0.47
SCMH1-217ENST00000498793 MED7O43513 233 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 MOCS2O96007 188 aaPredicted RBP12.1□□□□□ -0.47
SCMH1-217ENST00000498793 ADH1CP00326 375 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 TYRP14679 529 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 CDK11BP21127 795 aaKnown RBP12.1□□□□□ -0.47
SCMH1-217ENST00000498793 SLC6A4P31645 630 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 TIE1P35590 1138 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 PSEN1P49768 467 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 MLLT6P55198 1093 aaPredicted RBP12.1□□□□□ -0.47
SCMH1-217ENST00000498793 FMO1Q01740 532 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 PTK2Q05397 1052 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 TRIP4Q15650 581 aaPredicted RBP12.1□□□□□ -0.47
SCMH1-217ENST00000498793 LPAL2Q16609 132 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 RAB6CQ53S08 254 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 FKBP15Q5T1M5 1219 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 OR6B2Q6IFH4 312 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 OLFML1Q6UWY5 402 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 ARHGAP18Q8N392 663 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 ALLCQ8N6M5 410 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 RNF139Q8WU17 664 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 CPA5Q8WXQ8 436 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 PPP1R13BQ96KQ4 1090 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 FCRL2Q96LA5 508 aaPredicted RBP12.1□□□□□ -0.47
SCMH1-217ENST00000498793 BPIFA3Q9BQP9 254 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 STK33Q9BYT3 514 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 RAB6CQ9H0N0 254 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 KCNH6Q9H252 994 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 ARHGEF4Q9NR80 690 aa12.1□□□□□ -0.47
SCMH1-217ENST00000498793 DNAJC17Q9NVM6 304 aaKnown RBP12.1□□□□□ -0.47
SCMH1-217ENST00000498793 LSM7Q9UK45 103 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms