RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 NDUFA5Q16718 116 aa12.02□□□□□ -0.49
PBX1-211ENST00000498497 OGFRL1Q5TC84 451 aaPredicted RBP12.02□□□□□ -0.49
PBX1-211ENST00000498497 SCARA3Q6AZY7 606 aa12.02□□□□□ -0.49
PBX1-211ENST00000498497 C16orf46Q6P387 395 aa12.02□□□□□ -0.49
PBX1-211ENST00000498497 CRLF3Q8IUI8 442 aa12.02□□□□□ -0.49
PBX1-211ENST00000498497 RHOT2Q8IXI1 618 aa12.02□□□□□ -0.49
PBX1-211ENST00000498497 PALM2Q8IXS6 379 aa12.02□□□□□ -0.49
PBX1-211ENST00000498497 RTKN2Q8IZC4 609 aa12.02□□□□□ -0.49
PBX1-211ENST00000498497 SIX6OS1Q8N1H7 587 aa12.02□□□□□ -0.49
PBX1-211ENST00000498497 SCFD1Q8WVM8 642 aa12.02□□□□□ -0.49
PBX1-211ENST00000498497 NECTIN4Q96NY8 510 aa12.02□□□□□ -0.49
PBX1-211ENST00000498497 PNMA5Q96PV4 448 aa12.02□□□□□ -0.49
PBX1-211ENST00000498497 ALPK1Q96QP1 1244 aa12.02□□□□□ -0.49
PBX1-211ENST00000498497 GDAP2Q9NXN4 497 aa12.02□□□□□ -0.49
PBX1-211ENST00000498497 SFMBT1Q9UHJ3 866 aa12.02□□□□□ -0.49
PBX1-211ENST00000498497 DENRO43583 198 aaKnown RBP12.01□□□□□ -0.49
PBX1-211ENST00000498497 TMEM191BP0C7N4 346 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 TNNI2P48788 182 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 THOP1P52888 689 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 ECT2LQ008S8 904 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 SIX1Q15475 284 aaPredicted RBP12.01□□□□□ -0.49
PBX1-211ENST00000498497 KRT79Q5XKE5 535 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 SULT1C3Q6IMI6 304 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 LYSMD3Q7Z3D4 306 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 TMEM35BQ8NCS4 154 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 OR2T3Q8NH03 318 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 PSMA8Q8TAA3 256 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 DGCR6LQ9BY27 220 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 AS3MTQ9HBK9 375 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 FKBP14Q9NWM8 211 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 PXDNQ92626 1479 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 RTL9Q8NET4 1388 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 PRR23AA6NEV1 266 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 COPEO14579 308 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 AMHP03971 560 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 CYP2D6P10635 497 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 BMP3P12645 472 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 SOX5P35711 763 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 IL1RL1Q01638 556 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 PRKD1Q15139 912 aaPredicted RBP12.01□□□□□ -0.49
PBX1-211ENST00000498497 CALCRLQ16602 461 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 CDONQ4KMG0 1287 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 ZNF790Q6PG37 636 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 GALNT7Q86SF2 657 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 LRTOMTQ8WZ04 291 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 C6orf203Q9P0P8 240 aaPredicted RBP12.01□□□□□ -0.49
PBX1-211ENST00000498497 FETUBQ9UGM5 382 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 ANAPC7Q9UJX3 599 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 PSMD13Q9UNM6 376 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 POLHQ9Y253 713 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 ANKRD12Q6UB98 2062 aa12.01□□□□□ -0.49
PBX1-211ENST00000498497 TSPAN4O14817 238 aa12□□□□□ -0.49
PBX1-211ENST00000498497 SLC37A4O43826 429 aa12□□□□□ -0.49
PBX1-211ENST00000498497 ITGAXP20702 1163 aa12□□□□□ -0.49
PBX1-211ENST00000498497 TRAPPC10P48553 1259 aa12□□□□□ -0.49
PBX1-211ENST00000498497 RAB39AQ14964 217 aa12□□□□□ -0.49
PBX1-211ENST00000498497 SEC23AQ15436 765 aa12□□□□□ -0.49
PBX1-211ENST00000498497 ATP13A4Q4VNC1 1196 aa12□□□□□ -0.49
PBX1-211ENST00000498497 CYP4A22Q5TCH4 519 aa12□□□□□ -0.49
PBX1-211ENST00000498497 CCDC103Q8IW40 242 aa12□□□□□ -0.49
PBX1-211ENST00000498497 FIBCD1Q8N539 461 aa12□□□□□ -0.49
PBX1-211ENST00000498497 BEND7Q8N7W2 519 aaPredicted RBP12□□□□□ -0.49
PBX1-211ENST00000498497 PPM1NQ8N819 430 aa12□□□□□ -0.49
PBX1-211ENST00000498497 FAM84AQ96KN4 292 aa12□□□□□ -0.49
PBX1-211ENST00000498497 C8orf48Q96LL4 319 aa12□□□□□ -0.49
PBX1-211ENST00000498497 BEX2Q9BXY8 128 aa12□□□□□ -0.49
PBX1-211ENST00000498497 NYXQ9GZU5 481 aa12□□□□□ -0.49
PBX1-211ENST00000498497 HIPK3Q9H422 1215 aa12□□□□□ -0.49
PBX1-211ENST00000498497 MAGEE1Q9HCI5 957 aa12□□□□□ -0.49
PBX1-211ENST00000498497 TRAF6Q9Y4K3 522 aa12□□□□□ -0.49
PBX1-211ENST00000498497 DIP2AQ14689 1571 aa12□□□□□ -0.49
PBX1-211ENST00000498497 POTEB3A0JP26 581 aa12□□□□□ -0.49
PBX1-211ENST00000498497 TBKBP1A7MCY6 615 aa12□□□□□ -0.49
PBX1-211ENST00000498497 HOXC11O43248 304 aaPredicted RBP12□□□□□ -0.49
PBX1-211ENST00000498497 ALAS1P13196 640 aa12□□□□□ -0.49
PBX1-211ENST00000498497 SLC15A2Q16348 729 aa12□□□□□ -0.49
PBX1-211ENST00000498497 PFKFB3Q16875 520 aaPredicted RBP12□□□□□ -0.49
PBX1-211ENST00000498497 BROXQ5VW32 411 aa12□□□□□ -0.49
PBX1-211ENST00000498497 POTEBQ6S5H4 581 aa12□□□□□ -0.49
PBX1-211ENST00000498497 SLC30A10Q6XR72 485 aa12□□□□□ -0.49
PBX1-211ENST00000498497 SPATC1Q76KD6 591 aa12□□□□□ -0.49
PBX1-211ENST00000498497 LGI2Q8N0V4 545 aa12□□□□□ -0.49
PBX1-211ENST00000498497 FBXW8Q8N3Y1 598 aa12□□□□□ -0.49
PBX1-211ENST00000498497 ALLCQ8N6M5 410 aa12□□□□□ -0.49
PBX1-211ENST00000498497 SNX31Q8N9S9 440 aa12□□□□□ -0.49
PBX1-211ENST00000498497 CATSPER1Q8NEC5 780 aa12□□□□□ -0.49
PBX1-211ENST00000498497 E2F7Q96AV8 911 aa12□□□□□ -0.49
PBX1-211ENST00000498497 TTYH2Q9BSA4 534 aa12□□□□□ -0.49
PBX1-211ENST00000498497 PARVGQ9HBI0 331 aa12□□□□□ -0.49
PBX1-211ENST00000498497 UBE2TQ9NPD8 197 aaPredicted RBP12□□□□□ -0.49
PBX1-211ENST00000498497 GMIPQ9P107 970 aa12□□□□□ -0.49
PBX1-211ENST00000498497 ECM29Q5VYK3 1845 aa12□□□□□ -0.49
PBX1-211ENST00000498497 PPLO60437 1756 aa12□□□□□ -0.49
PBX1-211ENST00000498497 BTNL10A8MVZ5 291 aa12□□□□□ -0.49
PBX1-211ENST00000498497 SGK1O00141 431 aa12□□□□□ -0.49
PBX1-211ENST00000498497 NRP1O14786 923 aa12□□□□□ -0.49
PBX1-211ENST00000498497 KMOO15229 486 aa12□□□□□ -0.49
PBX1-211ENST00000498497 ASNA1O43681 348 aa12□□□□□ -0.49
PBX1-211ENST00000498497 RNASEH2AO75792 299 aaKnown RBP12□□□□□ -0.49
PBX1-211ENST00000498497 PRKAA2P54646 552 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms