RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 ATP1A4Q13733 1029 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 CCNG2Q16589 344 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 ATP2B3Q16720 1220 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 PLEKHN1Q494U1 663 aaPredicted RBP2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 VWA3BQ502W6 1294 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 TIGD5Q53EQ6 642 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 HERC4Q5GLZ8 1057 aaPredicted RBP2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 PRR31Q5SQ13 230 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 CCDC30Q5VVM6 783 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 PLAG1Q6DJT9 500 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 MCTP2Q6DN12 878 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 ANO7Q6IWH7 933 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 ACAD10Q6JQN1 1059 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 NFRKBQ6P4R8 1299 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 FBXO38Q6PIJ6 1188 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 TREML4Q6UXN2 200 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 TMC5Q6UXY8 1006 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 NFXL1Q6ZNB6 911 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 RASGRP2Q7LDG7 609 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 ZC3H18Q86VM9 953 aaKnown RBP2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 HEATR4Q86WZ0 1026 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 IRF2BP1Q8IU81 584 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 ZFPM1Q8IX07 1006 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 NLGN4YQ8NFZ3 816 aaPredicted RBP2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 SSH3Q8TE77 659 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 ST8SIA4Q92187 359 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 EDAQ92838 391 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 BADQ92934 168 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 CLMNQ96JQ2 1002 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 WDR24Q96S15 920 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 REEP2Q9BRK0 252 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 PAAF1Q9BRP4 392 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 NDC1Q9BTX1 674 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 C1orf43Q9BWL3 253 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 KIAA1683Q9H0B3 1180 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 GHITMQ9H3K2 345 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 ABHD16BQ9H3Z7 469 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 MLXIPQ9HAP2 919 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 HEYLQ9NQ87 328 aaPredicted RBP2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 SLAMF8Q9P0V8 285 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 ARHGAP20Q9P2F6 1191 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 KLHL14Q9P2G3 628 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 TBC1D14Q9P2M4 693 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 LPAR3Q9UBY5 353 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 GIMAP2Q9UG22 337 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 SLC23A1Q9UHI7 598 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 CPA4Q9UI42 421 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 VPS51Q9UID3 782 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 TBX20Q9UMR3 447 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 NFU1Q9UMS0 254 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 C19orf53Q9UNZ5 99 aaPredicted RBP2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 ADAMTS8Q9UP79 889 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 TAF1P21675 1872 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 KMT2EQ8IZD2 1858 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 LTBP2Q14767 1821 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 CELSR3Q9NYQ7 3312 aa2.75□□□□□ -1.97
CKS1BP2-201ENST00000497342 FLT4P35916 1363 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 SH3TC1Q8TE82 1336 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 KDM3AQ9Y4C1 1321 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 DDX60LQ5H9U9 1706 aaKnown RBP2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 LOC102723971A0A1B0GUV8 181 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 FSD2A1L4K1 749 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 AQP7P3A6NL99 342 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 F8W031 263 aaPredicted RBP2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 H0Y3Z8 333 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 TOR1BO14657 336 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 NRP1O14786 923 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 DKC1O60832 514 aaKnown RBP eCLIP2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 CBFA2T3O75081 653 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 PTP4A3O75365 173 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 ITGA10O75578 1167 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 PGM3O95394 542 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 MPOP05164 745 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 ANXA6P08133 673 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 PIM1P11309 404 aaPredicted RBP2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 LAMP2P13473 410 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 IGFBP6P24592 240 aaPredicted RBP2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 RPS12P25398 132 aaKnown RBP2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 CNTFP26441 200 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 SLC6A4P31645 630 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 NF2P35240 595 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 PSMC2P35998 433 aaKnown RBP2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 EPHB4P54760 987 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 CASP6P55212 293 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 ZP2Q05996 745 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 SCAPQ12770 1279 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 IKZF1Q13422 519 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 SMAD4Q13485 552 aaKnown RBP2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 RTP5Q14D33 572 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 SURF1Q15526 300 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 NKAPLQ5M9Q1 402 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 DCAF12L1Q5VU92 463 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 ITPRIPL1Q6GPH6 555 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 PLBD1Q6P4A8 553 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 KLHL17Q6TDP4 642 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 C17orf99Q6UX52 265 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 RAB11FIP2Q7L804 512 aa2.74□□□□□ -1.97
CKS1BP2-201ENST00000497342 PRPF39Q86UA1 669 aaKnown RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms