RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 EPHA7Q15375 998 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 ALX1Q15699 326 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 NAALADL2Q58DX5 795 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 TMEM26Q6ZUK4 368 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 CDK5RAP1Q96SZ6 601 aaKnown RBP8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 CDRT15Q96T59 188 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 SEMA6AQ9H2E6 1030 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 PCSK1NQ9UHG2 260 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 DNAJC16Q9Y2G8 782 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 ST14Q9Y5Y6 855 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 PTPRUQ92729 1446 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 PABPN1LA6NDY0 278 aaKnown RBP8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 SAGE2PA6NJ88 616 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 PSTPIP1O43586 416 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 CIAO1O76071 339 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 CALB1P05937 261 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 RFX1P22670 979 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 AKR1D1P51857 326 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 RPS3AP61247 264 aaKnown RBP8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 ATP6V0D1P61421 351 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 MYBPC1Q00872 1141 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 PFKPQ01813 784 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 POU5F1Q01860 360 aaKnown RBP8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 MRPL28Q13084 256 aaKnown RBP8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 PFKFB3Q16875 520 aaPredicted RBP8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 CCDC58Q4VC31 144 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 TNFAIP8L3Q5GJ75 292 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 AGAP7PQ5VUJ5 663 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 BROXQ5VW32 411 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 USP37Q86T82 979 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 SLCO6A1Q86UG4 719 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 IFNL1Q8IU54 200 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 CAMK1DQ8IU85 385 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 TAB3Q8N5C8 712 aaPredicted RBP8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 ABTB2Q8N961 1025 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 ACTRT2Q8TDY3 377 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 ALG3Q92685 438 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 RAD54LQ92698 747 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 PROX1Q92786 737 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 GJA10Q969M2 543 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 CNDP1Q96KN2 507 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 REXO4Q9GZR2 422 aaKnown RBP8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 MKRN2Q9H000 416 aaKnown RBP8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 EFCAB1Q9HAE3 211 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 VAT1LQ9HCJ6 419 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 SH3GLB2Q9NR46 395 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 HEMK1Q9Y5R4 338 aaPredicted RBP8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 CPQQ9Y646 472 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 ZHX2Q9Y6X8 837 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 CD163L1Q9NR16 1453 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 A0A1W2PPM1 405 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 A0A1W2PRG6 482 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 MYMKA6NI61 221 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 KCNQ3O43525 872 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 RBL1P28749 1068 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 RRM2P31350 389 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 NPTX2P47972 431 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 TRIM32Q13049 653 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 SNAPC2Q13487 334 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 MORF4L2Q15014 288 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 TBC1D10BQ4KMP7 808 aaPredicted RBP8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 LRRC24Q50LG9 513 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 AARS2Q5JTZ9 985 aaKnown RBP8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 PPP4R4Q6NUP7 873 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 AADACL2Q6P093 401 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 FBXL19Q6PCT2 694 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 SLC22A16Q86VW1 577 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 CHSY1Q86X52 802 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 SFRP1Q8N474 314 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 SH3RF3Q8TEJ3 882 aaPredicted RBP8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 AFG1LQ8WV93 481 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 EPB41L4AQ9HCS5 686 aaPredicted RBP8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 POLIQ9UNA4 740 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 BTBD3Q9Y2F9 522 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 MYH15Q9Y2K3 1946 aa8.42□□□□□ -1.06
CRNKL1-205ENST00000496549 MAGEB6P1A0A0J9YX57 407 aa8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 STX7O15400 261 aaKnown RBP8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 TOMM70O94826 608 aa8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 ZNF182P17025 639 aaPredicted RBP8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 POLR2CP19387 275 aaPredicted RBP8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 NR4A2P43354 598 aa8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 CDH15P55291 814 aa8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 DAB2P98082 770 aa8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 RAD51Q06609 339 aa8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 BST1Q10588 318 aa8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 ILF2Q12905 390 aaKnown RBP8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 LAMC2Q13753 1193 aa8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 ZYXQ15942 572 aaKnown RBP8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 TTC39BQ5VTQ0 682 aaPredicted RBP8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 PLEKHM3Q6ZWE6 761 aa8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 USP43Q70EL4 1123 aa8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 SNX32Q86XE0 403 aa8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 CDKL2Q92772 493 aa8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 TMIGD2Q96BF3 282 aa8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 POP1Q99575 1024 aaKnown RBP8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 TMEM246Q9BRR3 403 aa8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 ANO3Q9BYT9 981 aa8.41□□□□□ -1.06
CRNKL1-205ENST00000496549 LGR6Q9HBX8 967 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms