RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 MIB1Q86YT6 1006 aa11.48□□□□□ -0.57
RNF220-217ENST00000496262 ETFBKMTQ8IXQ9 262 aa11.48□□□□□ -0.57
RNF220-217ENST00000496262 FAM186BQ8IYM0 893 aa11.48□□□□□ -0.57
RNF220-217ENST00000496262 TERB1Q8NA31 727 aa11.48□□□□□ -0.57
RNF220-217ENST00000496262 OLIG1Q8TAK6 271 aa11.48□□□□□ -0.57
RNF220-217ENST00000496262 CYFIP2Q96F07 1278 aa11.48□□□□□ -0.57
RNF220-217ENST00000496262 EEF2KMTQ96G04 330 aa11.48□□□□□ -0.57
RNF220-217ENST00000496262 HNRNPABQ99729 332 aaKnown RBP11.48□□□□□ -0.57
RNF220-217ENST00000496262 BBS2Q9BXC9 721 aa11.48□□□□□ -0.57
RNF220-217ENST00000496262 NT5C1AQ9BXI3 368 aa11.48□□□□□ -0.57
RNF220-217ENST00000496262 NIF3L1Q9GZT8 377 aa11.48□□□□□ -0.57
RNF220-217ENST00000496262 NMUR1Q9HB89 426 aa11.48□□□□□ -0.57
RNF220-217ENST00000496262 CSNK1G1Q9HCP0 422 aa11.48□□□□□ -0.57
RNF220-217ENST00000496262 TMEM9BQ9NQ34 198 aa11.48□□□□□ -0.57
RNF220-217ENST00000496262 MBD1Q9UIS9 605 aaPredicted RBP11.48□□□□□ -0.57
RNF220-217ENST00000496262 NAGPAQ9UK23 515 aa11.48□□□□□ -0.57
RNF220-217ENST00000496262 LSM7Q9UK45 103 aaKnown RBP11.48□□□□□ -0.57
RNF220-217ENST00000496262 HPSEQ9Y251 543 aa11.48□□□□□ -0.57
RNF220-217ENST00000496262 SPAG17Q6Q759 2223 aa11.48□□□□□ -0.57
RNF220-217ENST00000496262 ACACBO00763 2458 aa11.48□□□□□ -0.57
RNF220-217ENST00000496262 CFIP05156 583 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 MYL1P05976 194 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 RARGP13631 454 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 TYRP14679 529 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 PMLP29590 882 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 ATP5C1P36542 298 aaKnown RBP11.47□□□□□ -0.57
RNF220-217ENST00000496262 IRX4P78413 519 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 INCA1Q0VD86 236 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 DPYDQ12882 1025 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 NAA30Q147X3 362 aaPredicted RBP11.47□□□□□ -0.57
RNF220-217ENST00000496262 MAP7D1Q3KQU3 841 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 TRIM61Q5EBN2 209 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 SH3PXD2AQ5TCZ1 1133 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 DAB2IPQ5VWQ8 1189 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 EGFLAMQ63HQ2 1017 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 NUDT18Q6ZVK8 323 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 INTS8Q75QN2 995 aaKnown RBP11.47□□□□□ -0.57
RNF220-217ENST00000496262 TRMT11Q7Z4G4 463 aaKnown RBP11.47□□□□□ -0.57
RNF220-217ENST00000496262 SMYD4Q8IYR2 804 aaPredicted RBP11.47□□□□□ -0.57
RNF220-217ENST00000496262 CHPFQ8IZ52 775 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 XPO6Q96QU8 1125 aaKnown RBP11.47□□□□□ -0.57
RNF220-217ENST00000496262 ACOX2Q99424 681 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 KLF16Q9BXK1 252 aaPredicted RBP11.47□□□□□ -0.57
RNF220-217ENST00000496262 FSCN3Q9NQT6 498 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 TMEM74BQ9NUR3 256 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 TRMT1Q9NXH9 659 aaKnown RBP11.47□□□□□ -0.57
RNF220-217ENST00000496262 PLK2Q9NYY3 685 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 CALCOCO1Q9P1Z2 691 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 SCML2Q9UQR0 700 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 TRAF3IP3Q9Y228 551 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 RAD54BQ9Y620 910 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 CHD8Q9HCK8 2581 aa11.47□□□□□ -0.57
RNF220-217ENST00000496262 A0A0A0MRY4 1105 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 HHLA1C9JL84 531 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 CBFA2T2O43439 604 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 GREM1O60565 184 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 RHOBTB3O94955 611 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 HMBSP08397 361 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 GABRG2P18507 467 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 RPL13P26373 211 aaKnown RBP11.46□□□□□ -0.57
RNF220-217ENST00000496262 PSMC2P35998 433 aaKnown RBP11.46□□□□□ -0.57
RNF220-217ENST00000496262 RPL6Q02878 288 aaKnown RBP11.46□□□□□ -0.57
RNF220-217ENST00000496262 ZNF252P-AS1Q0IIN9 211 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 FOXC1Q12948 553 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 ADAM9Q13443 819 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 PREPLQ4J6C6 727 aaPredicted RBP11.46□□□□□ -0.57
RNF220-217ENST00000496262 PPP1R26Q5T8A7 1209 aaPredicted RBP11.46□□□□□ -0.57
RNF220-217ENST00000496262 LYSMD4Q5XG99 296 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 KRBA2Q6ZNG9 492 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 TOGARAM2Q6ZUX3 1019 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 HTR3DQ70Z44 454 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 CREBRFQ8IUR6 639 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 TMEM174Q8WUU8 243 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 PPP1R13BQ96KQ4 1090 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 HEXIM2Q96MH2 286 aaKnown RBP11.46□□□□□ -0.57
RNF220-217ENST00000496262 XPO4Q9C0E2 1151 aaKnown RBP11.46□□□□□ -0.57
RNF220-217ENST00000496262 SLC6A17Q9H1V8 727 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 CYP3A43Q9HB55 503 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 CYLDQ9NQC7 956 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.46□□□□□ -0.57
RNF220-217ENST00000496262 IFNKQ9P0W0 207 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 KIAA1468Q9P260 1216 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 RASAL2Q9UJF2 1139 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 DNMT3LQ9UJW3 386 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 HCN2Q9UL51 889 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 PCDHA5Q9Y5H7 936 aa11.46□□□□□ -0.57
RNF220-217ENST00000496262 TPRP12270 2363 aaKnown RBP11.46□□□□□ -0.58
RNF220-217ENST00000496262 PRRT4C9JH25 899 aa11.45□□□□□ -0.58
RNF220-217ENST00000496262 CDX4O14627 284 aaPredicted RBP11.45□□□□□ -0.58
RNF220-217ENST00000496262 MAPK13O15264 365 aa11.45□□□□□ -0.58
RNF220-217ENST00000496262 ZBTB24O43167 697 aaPredicted RBP11.45□□□□□ -0.58
RNF220-217ENST00000496262 CACNG3O60359 315 aa11.45□□□□□ -0.58
RNF220-217ENST00000496262 CILPO75339 1184 aa11.45□□□□□ -0.58
RNF220-217ENST00000496262 ITPKAP23677 461 aa11.45□□□□□ -0.58
RNF220-217ENST00000496262 NTSR1P30989 418 aa11.45□□□□□ -0.58
RNF220-217ENST00000496262 DGKGP49619 791 aa11.45□□□□□ -0.58
RNF220-217ENST00000496262 KIF11P52732 1056 aa11.45□□□□□ -0.58
RNF220-217ENST00000496262 FAM193AP78312 1265 aa11.45□□□□□ -0.58
RNF220-217ENST00000496262 EFEMP1Q12805 493 aa11.45□□□□□ -0.58
RNF220-217ENST00000496262 BYSLQ13895 437 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms