RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 MSI2Q96DH6 328 aaKnown RBP5.07□□□□□ -1.6
CLTC-208ENST00000496076 TRBV5-3A0A0A0MS03 114 aa5.06□□□□□ -1.6
CLTC-208ENST00000496076 MBD3L4A6NDZ8 208 aaPredicted RBP5.06□□□□□ -1.6
CLTC-208ENST00000496076 MBD3L3A6NE82 208 aaPredicted RBP5.06□□□□□ -1.6
CLTC-208ENST00000496076 F8W810 466 aa5.06□□□□□ -1.6
CLTC-208ENST00000496076 KRT10P13645 584 aa5.06□□□□□ -1.6
CLTC-208ENST00000496076 NTSR1P30989 418 aa5.06□□□□□ -1.6
CLTC-208ENST00000496076 GALNSP34059 522 aa5.06□□□□□ -1.6
CLTC-208ENST00000496076 POLD2P49005 469 aa5.06□□□□□ -1.6
CLTC-208ENST00000496076 MTA1Q13330 715 aa5.06□□□□□ -1.6
CLTC-208ENST00000496076 NUDCD2Q8WVJ2 157 aa5.06□□□□□ -1.6
CLTC-208ENST00000496076 DNASE2BQ8WZ79 361 aa5.06□□□□□ -1.6
CLTC-208ENST00000496076 SUCLG2Q96I99 432 aa5.06□□□□□ -1.6
CLTC-208ENST00000496076 HIST1H2AAQ96QV6 131 aa5.06□□□□□ -1.6
CLTC-208ENST00000496076 ACO2Q99798 780 aaKnown RBP5.06□□□□□ -1.6
CLTC-208ENST00000496076 CINPQ9BW66 212 aaPredicted RBP5.06□□□□□ -1.6
CLTC-208ENST00000496076 STK31Q9BXU1 1019 aa5.06□□□□□ -1.6
CLTC-208ENST00000496076 DHX36Q9H2U1 1008 aaKnown RBP5.06□□□□□ -1.6
CLTC-208ENST00000496076 VPS45Q9NRW7 570 aa5.06□□□□□ -1.6
CLTC-208ENST00000496076 SACM1LQ9NTJ5 587 aa5.06□□□□□ -1.6
CLTC-208ENST00000496076 TCEAL9Q9UHQ7 104 aa5.06□□□□□ -1.6
CLTC-208ENST00000496076 HEMK1Q9Y5R4 338 aaPredicted RBP5.06□□□□□ -1.6
CLTC-208ENST00000496076 EID1Q9Y6B2 187 aa5.06□□□□□ -1.6
CLTC-208ENST00000496076 USP19O94966 1318 aa5.05□□□□□ -1.6
CLTC-208ENST00000496076 ARID4BQ4LE39 1312 aaPredicted RBP5.05□□□□□ -1.6
CLTC-208ENST00000496076 TRIM43BA6NCK2 446 aa5.05□□□□□ -1.6
CLTC-208ENST00000496076 ALDH1L1O75891 902 aa5.05□□□□□ -1.6
CLTC-208ENST00000496076 GAS8-AS1O95177 125 aa5.05□□□□□ -1.6
CLTC-208ENST00000496076 CT47B1P0C2W7 299 aaPredicted RBP5.05□□□□□ -1.6
CLTC-208ENST00000496076 KLRC1P26715 233 aa5.05□□□□□ -1.6
CLTC-208ENST00000496076 NEK2P51955 445 aa5.05□□□□□ -1.6
CLTC-208ENST00000496076 AGFG1P52594 562 aaKnown RBP5.05□□□□□ -1.6
CLTC-208ENST00000496076 EIF4A1P60842 406 aaKnown RBP5.05□□□□□ -1.6
CLTC-208ENST00000496076 WDR5P61964 334 aaKnown RBP5.05□□□□□ -1.6
CLTC-208ENST00000496076 SLC29A2Q14542 456 aa5.05□□□□□ -1.6
CLTC-208ENST00000496076 ODF3L2Q3SX64 289 aa5.05□□□□□ -1.6
CLTC-208ENST00000496076 ANO6Q4KMQ2 910 aa5.05□□□□□ -1.6
CLTC-208ENST00000496076 CCDC181Q5TID7 509 aa5.05□□□□□ -1.6
CLTC-208ENST00000496076 CLEC9AQ6UXN8 241 aa5.05□□□□□ -1.6
CLTC-208ENST00000496076 RBM44Q6ZP01 1051 aaKnown RBP5.05□□□□□ -1.6
CLTC-208ENST00000496076 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.05□□□□□ -1.6
CLTC-208ENST00000496076 IQCF1Q8N6M8 205 aa5.05□□□□□ -1.6
CLTC-208ENST00000496076 NEUROG1Q92886 237 aa5.05□□□□□ -1.6
CLTC-208ENST00000496076 ATP2A3Q93084 1043 aa5.05□□□□□ -1.6
CLTC-208ENST00000496076 TRIM43Q96BQ3 446 aaPredicted RBP5.05□□□□□ -1.6
CLTC-208ENST00000496076 HOOK2Q96ED9 719 aa5.05□□□□□ -1.6
CLTC-208ENST00000496076 PRR11Q96HE9 360 aaPredicted RBP5.05□□□□□ -1.6
CLTC-208ENST00000496076 PAPOLBQ9NRJ5 636 aaKnown RBP5.05□□□□□ -1.6
CLTC-208ENST00000496076 STK32BQ9NY57 414 aa5.05□□□□□ -1.6
CLTC-208ENST00000496076 ANAPC4Q9UJX5 808 aa5.05□□□□□ -1.6
CLTC-208ENST00000496076 HDAC9Q9UKV0 1011 aa5.05□□□□□ -1.6
CLTC-208ENST00000496076 SLC27A6Q9Y2P4 619 aa5.05□□□□□ -1.6
CLTC-208ENST00000496076 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.04□□□□□ -1.6
CLTC-208ENST00000496076 RAB27BO00194 218 aa5.04□□□□□ -1.6
CLTC-208ENST00000496076 ACOT8O14734 319 aa5.04□□□□□ -1.6
CLTC-208ENST00000496076 SPTLC2O15270 562 aa5.04□□□□□ -1.6
CLTC-208ENST00000496076 UGDHO60701 494 aa5.04□□□□□ -1.6
CLTC-208ENST00000496076 SNX2O60749 519 aa5.04□□□□□ -1.6
CLTC-208ENST00000496076 MBPP02686 304 aaPredicted RBP5.04□□□□□ -1.6
CLTC-208ENST00000496076 TMIGD3P0DMS9 266 aaPredicted RBP5.04□□□□□ -1.6
CLTC-208ENST00000496076 ST6GAL1P15907 406 aa5.04□□□□□ -1.6
CLTC-208ENST00000496076 SUMO3P55854 103 aaPredicted RBP5.04□□□□□ -1.6
CLTC-208ENST00000496076 NFATC4Q14934 902 aa5.04□□□□□ -1.6
CLTC-208ENST00000496076 TTF1Q15361 905 aaPredicted RBP5.04□□□□□ -1.6
CLTC-208ENST00000496076 C9orf50Q5SZB4 431 aa5.04□□□□□ -1.6
CLTC-208ENST00000496076 NUGGCQ68CJ6 796 aa5.04□□□□□ -1.6
CLTC-208ENST00000496076 SPATA2LQ8IUW3 424 aaPredicted RBP5.04□□□□□ -1.6
CLTC-208ENST00000496076 WDR75Q8IWA0 830 aaKnown RBP5.04□□□□□ -1.6
CLTC-208ENST00000496076 SLC35G2Q8TBE7 412 aa5.04□□□□□ -1.6
CLTC-208ENST00000496076 NR4A3Q92570 626 aa5.04□□□□□ -1.6
CLTC-208ENST00000496076 TSR2Q969E8 191 aaKnown RBP5.04□□□□□ -1.6
CLTC-208ENST00000496076 MIB2Q96AX9 1013 aa5.04□□□□□ -1.6
CLTC-208ENST00000496076 P2RY11Q96G91 374 aa5.04□□□□□ -1.6
CLTC-208ENST00000496076 ZNF668Q96K58 619 aaPredicted RBP5.04□□□□□ -1.6
CLTC-208ENST00000496076 MOV10Q9HCE1 1003 aaKnown RBP5.04□□□□□ -1.6
CLTC-208ENST00000496076 CPNE7Q9UBL6 633 aa5.04□□□□□ -1.6
CLTC-208ENST00000496076 PCDHA7Q9UN72 937 aa5.04□□□□□ -1.6
CLTC-208ENST00000496076 PRPF4O43172 522 aaKnown RBP eCLIP5.03□□□□□ -1.6
CLTC-208ENST00000496076 ATG13O75143 517 aa5.03□□□□□ -1.6
CLTC-208ENST00000496076 TMEM225BP0DP42 221 aa5.03□□□□□ -1.6
CLTC-208ENST00000496076 FGF3P11487 239 aaPredicted RBP5.03□□□□□ -1.6
CLTC-208ENST00000496076 HSPA6P17066 643 aa5.03□□□□□ -1.6
CLTC-208ENST00000496076 HOXA11P31270 313 aaPredicted RBP5.03□□□□□ -1.6
CLTC-208ENST00000496076 GRHL2Q6ISB3 625 aa5.03□□□□□ -1.6
CLTC-208ENST00000496076 NPNTQ6UXI9 565 aa5.03□□□□□ -1.6
CLTC-208ENST00000496076 NR2C2APQ86WQ0 139 aa5.03□□□□□ -1.6
CLTC-208ENST00000496076 ADGRF4Q8IZF3 695 aa5.03□□□□□ -1.6
CLTC-208ENST00000496076 SMCR8Q8TEV9 937 aaPredicted RBP5.03□□□□□ -1.6
CLTC-208ENST00000496076 MED30Q96HR3 178 aa5.03□□□□□ -1.6
CLTC-208ENST00000496076 LRGUKQ96M69 825 aa5.03□□□□□ -1.6
CLTC-208ENST00000496076 RBM38Q9H0Z9 239 aaKnown RBP5.03□□□□□ -1.6
CLTC-208ENST00000496076 FZD3Q9NPG1 666 aa5.03□□□□□ -1.6
CLTC-208ENST00000496076 NMRK2Q9NPI5 230 aa5.03□□□□□ -1.6
CLTC-208ENST00000496076 TRIP12Q14669 1992 aaPredicted RBP5.03□□□□□ -1.6
CLTC-208ENST00000496076 A0A0G2JK05 382 aa5.02□□□□□ -1.61
CLTC-208ENST00000496076 AQP7P3A6NL99 342 aa5.02□□□□□ -1.61
CLTC-208ENST00000496076 FAM227AF5H4B4 570 aa5.02□□□□□ -1.61
CLTC-208ENST00000496076 TPH1P17752 444 aa5.02□□□□□ -1.61
CLTC-208ENST00000496076 IDUAP35475 653 aa5.02□□□□□ -1.61
CLTC-208ENST00000496076 CPT1AP50416 773 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms