RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 VPS51Q9UID3 782 aa4.89□□□□□ -1.63
SRRM1-219ENST00000495561 ZNF180Q9UJW8 692 aa4.89□□□□□ -1.63
SRRM1-219ENST00000495561 PCDHA12Q9UN75 941 aa4.89□□□□□ -1.63
SRRM1-219ENST00000495561 AQP7P3A6NL99 342 aa4.88□□□□□ -1.63
SRRM1-219ENST00000495561 AKAP10O43572 662 aa4.88□□□□□ -1.63
SRRM1-219ENST00000495561 ALDH1L1O75891 902 aa4.88□□□□□ -1.63
SRRM1-219ENST00000495561 IL1R1P14778 569 aa4.88□□□□□ -1.63
SRRM1-219ENST00000495561 BRAFP15056 766 aa4.88□□□□□ -1.63
SRRM1-219ENST00000495561 TPH1P17752 444 aa4.88□□□□□ -1.63
SRRM1-219ENST00000495561 RBL1P28749 1068 aa4.88□□□□□ -1.63
SRRM1-219ENST00000495561 COPAP53621 1224 aa4.88□□□□□ -1.63
SRRM1-219ENST00000495561 WDR5P61964 334 aaKnown RBP4.88□□□□□ -1.63
SRRM1-219ENST00000495561 MCL1Q07820 350 aa4.88□□□□□ -1.63
SRRM1-219ENST00000495561 CLCA4Q14CN2 919 aa4.88□□□□□ -1.63
SRRM1-219ENST00000495561 GRHL2Q6ISB3 625 aa4.88□□□□□ -1.63
SRRM1-219ENST00000495561 APOA5Q6Q788 366 aa4.88□□□□□ -1.63
SRRM1-219ENST00000495561 RBM44Q6ZP01 1051 aaKnown RBP4.88□□□□□ -1.63
SRRM1-219ENST00000495561 EPM2AIP1Q7L775 607 aaPredicted RBP4.88□□□□□ -1.63
SRRM1-219ENST00000495561 MSI2Q96DH6 328 aaKnown RBP4.88□□□□□ -1.63
SRRM1-219ENST00000495561 TUBB6Q9BUF5 446 aa4.88□□□□□ -1.63
SRRM1-219ENST00000495561 DNAJB11Q9UBS4 358 aa4.88□□□□□ -1.63
SRRM1-219ENST00000495561 AFF4Q9UHB7 1163 aaKnown RBP4.88□□□□□ -1.63
SRRM1-219ENST00000495561 MID2Q9UJV3 735 aa4.88□□□□□ -1.63
SRRM1-219ENST00000495561 ATAD2BQ9ULI0 1458 aa4.88□□□□□ -1.63
SRRM1-219ENST00000495561 TRBV5-3A0A0A0MS03 114 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.87□□□□□ -1.63
SRRM1-219ENST00000495561 A0A1W2PPC1 479 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 ISM1B1AKI9 464 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 FAM227AF5H4B4 570 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 F8W810 466 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 SNX2O60749 519 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 USP12O75317 370 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 TMIGD3P0DMS9 266 aaPredicted RBP4.87□□□□□ -1.63
SRRM1-219ENST00000495561 TMEM225BP0DP42 221 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 TXNP10599 105 aaKnown RBP4.87□□□□□ -1.63
SRRM1-219ENST00000495561 HOXB2P14652 356 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 CDC25AP30304 524 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 IDUAP35475 653 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 PGGT1BP53609 377 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 SLC12A2P55011 1212 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 RPS16P62249 146 aaKnown RBP4.87□□□□□ -1.63
SRRM1-219ENST00000495561 PPATQ06203 517 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 MTA1Q13330 715 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 KCNAB1Q14722 419 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 ODF3L2Q3SX64 289 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 ZNF628Q5EBL2 1059 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.87□□□□□ -1.63
SRRM1-219ENST00000495561 ZBTB8BQ8NAP8 495 aaPredicted RBP4.87□□□□□ -1.63
SRRM1-219ENST00000495561 SLC44A5Q8NCS7 719 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 SMCR8Q8TEV9 937 aaPredicted RBP4.87□□□□□ -1.63
SRRM1-219ENST00000495561 P2RY11Q96G91 374 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 TMEM60Q9H2L4 133 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 SAP30LQ9HAJ7 183 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 RGS17Q9UGC6 210 aaPredicted RBP4.87□□□□□ -1.63
SRRM1-219ENST00000495561 NCAPD3P42695 1498 aa4.87□□□□□ -1.63
SRRM1-219ENST00000495561 A0A0G2JK05 382 aa4.86□□□□□ -1.63
SRRM1-219ENST00000495561 E2F8A0AVK6 867 aa4.86□□□□□ -1.63
SRRM1-219ENST00000495561 ST6GAL1P15907 406 aa4.86□□□□□ -1.63
SRRM1-219ENST00000495561 ZKSCAN1P17029 563 aaPredicted RBP4.86□□□□□ -1.63
SRRM1-219ENST00000495561 TNFRSF8P28908 595 aa4.86□□□□□ -1.63
SRRM1-219ENST00000495561 ARRB2P32121 409 aa4.86□□□□□ -1.63
SRRM1-219ENST00000495561 HTR7P34969 479 aa4.86□□□□□ -1.63
SRRM1-219ENST00000495561 RAE1P78406 368 aaKnown RBP4.86□□□□□ -1.63
SRRM1-219ENST00000495561 DNASE1L3Q13609 305 aa4.86□□□□□ -1.63
SRRM1-219ENST00000495561 TTF1Q15361 905 aaPredicted RBP4.86□□□□□ -1.63
SRRM1-219ENST00000495561 CNN3Q15417 329 aaKnown RBP4.86□□□□□ -1.63
SRRM1-219ENST00000495561 CNGA2Q16280 664 aa4.86□□□□□ -1.63
SRRM1-219ENST00000495561 ASIC2Q16515 512 aa4.86□□□□□ -1.63
SRRM1-219ENST00000495561 PLAG1Q6DJT9 500 aa4.86□□□□□ -1.63
SRRM1-219ENST00000495561 YAF2Q8IY57 180 aa4.86□□□□□ -1.63
SRRM1-219ENST00000495561 KIAA0319LQ8IZA0 1049 aa4.86□□□□□ -1.63
SRRM1-219ENST00000495561 TMEM199Q8N511 208 aa4.86□□□□□ -1.63
SRRM1-219ENST00000495561 ZDHHC12Q96GR4 267 aa4.86□□□□□ -1.63
SRRM1-219ENST00000495561 GATA5Q9BWX5 397 aaPredicted RBP4.86□□□□□ -1.63
SRRM1-219ENST00000495561 CHST8Q9H2A9 424 aa4.86□□□□□ -1.63
SRRM1-219ENST00000495561 MOV10Q9HCE1 1003 aaKnown RBP4.86□□□□□ -1.63
SRRM1-219ENST00000495561 PAPOLBQ9NRJ5 636 aaKnown RBP4.86□□□□□ -1.63
SRRM1-219ENST00000495561 COL20A1Q9P218 1284 aa4.86□□□□□ -1.63
SRRM1-219ENST00000495561 HEMK1Q9Y5R4 338 aaPredicted RBP4.86□□□□□ -1.63
SRRM1-219ENST00000495561 CFAP69A5D8W1 941 aa4.85□□□□□ -1.63
SRRM1-219ENST00000495561 FRS3O43559 492 aa4.85□□□□□ -1.63
SRRM1-219ENST00000495561 CTNND1O60716 968 aaKnown RBP4.85□□□□□ -1.63
SRRM1-219ENST00000495561 BTF3P20290 206 aaKnown RBP4.85□□□□□ -1.63
SRRM1-219ENST00000495561 POLD2P49005 469 aa4.85□□□□□ -1.63
SRRM1-219ENST00000495561 P2RX3P56373 397 aa4.85□□□□□ -1.63
SRRM1-219ENST00000495561 MTAPQ13126 283 aa4.85□□□□□ -1.63
SRRM1-219ENST00000495561 INPP5JQ15735 1006 aaPredicted RBP4.85□□□□□ -1.63
SRRM1-219ENST00000495561 MANEALQ5VSG8 457 aa4.85□□□□□ -1.63
SRRM1-219ENST00000495561 P3H2Q8IVL5 708 aa4.85□□□□□ -1.63
SRRM1-219ENST00000495561 MEIS3Q99687 375 aa4.85□□□□□ -1.63
SRRM1-219ENST00000495561 SELENOOQ9BVL4 669 aa4.85□□□□□ -1.63
SRRM1-219ENST00000495561 ARHGAP39Q9C0H5 1083 aa4.85□□□□□ -1.63
SRRM1-219ENST00000495561 ZCWPW1Q9H0M4 648 aa4.85□□□□□ -1.63
SRRM1-219ENST00000495561 MYLK2Q9H1R3 596 aa4.85□□□□□ -1.63
SRRM1-219ENST00000495561 SELENONQ9NZV5 590 aa4.85□□□□□ -1.63
SRRM1-219ENST00000495561 COL15A1P39059 1388 aa4.85□□□□□ -1.63
SRRM1-219ENST00000495561 NESP48681 1621 aa4.84□□□□□ -1.63
SRRM1-219ENST00000495561 SMARCA4P51532 1647 aa4.84□□□□□ -1.63
SRRM1-219ENST00000495561 MROH2BQ7Z745 1585 aa4.84□□□□□ -1.63
SRRM1-219ENST00000495561 SPTLC2O15270 562 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms