RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 OR2I1PQ8NGU4 316 aa7.3□□□□□ -1.24
VIM-207ENST00000495528 NEK9Q8TD19 979 aa7.3□□□□□ -1.24
VIM-207ENST00000495528 RUFY2Q8WXA3 655 aa7.3□□□□□ -1.24
VIM-207ENST00000495528 C8orf49Q96NF6 230 aa7.3□□□□□ -1.24
VIM-207ENST00000495528 C16orf70Q9BSU1 422 aa7.3□□□□□ -1.24
VIM-207ENST00000495528 LDAHQ9H6V9 325 aa7.3□□□□□ -1.24
VIM-207ENST00000495528 KAT14Q9H8E8 782 aa7.3□□□□□ -1.24
VIM-207ENST00000495528 G3BP2Q9UN86 482 aaKnown RBP7.3□□□□□ -1.24
VIM-207ENST00000495528 SH3BP1Q9Y3L3 701 aa7.3□□□□□ -1.24
VIM-207ENST00000495528 SLC30A1Q9Y6M5 507 aa7.3□□□□□ -1.24
VIM-207ENST00000495528 H3BQ06 376 aaPredicted RBP7.29□□□□□ -1.24
VIM-207ENST00000495528 DHX16O60231 1041 aaKnown RBP7.29□□□□□ -1.24
VIM-207ENST00000495528 GGPS1O95749 300 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 PARP1P09874 1014 aaKnown RBP7.29□□□□□ -1.24
VIM-207ENST00000495528 PTPN7P35236 360 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 HSD17B4P51659 736 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 GHRHRQ02643 423 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 MCL1Q07820 350 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 GPM6BQ13491 265 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 UAP1L1Q3KQV9 507 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 EPC2Q52LR7 807 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 ASPRV1Q53RT3 343 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 FKBP15Q5T1M5 1219 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 STOX1Q6ZVD7 989 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 SERINC5Q86VE9 423 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 SGMS1Q86VZ5 419 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 IQCA1Q86XH1 822 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 TICAM2Q86XR7 235 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 ENAHQ8N8S7 591 aaPredicted RBP7.29□□□□□ -1.24
VIM-207ENST00000495528 ATP6V0A1Q93050 837 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 TOP1MTQ969P6 601 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 MRPL38Q96DV4 380 aaKnown RBP7.29□□□□□ -1.24
VIM-207ENST00000495528 IL17RAQ96F46 866 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 ZNF512Q96ME7 567 aaPredicted RBP7.29□□□□□ -1.24
VIM-207ENST00000495528 SPATA33Q96N06 139 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 SAMD11Q96NU1 681 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 PDCD2LQ9BRP1 358 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 RNPEPQ9H4A4 650 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 SMPD4Q9NXE4 827 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 CTNNA3Q9UI47 895 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 BRWD1Q9NSI6 2320 aa7.29□□□□□ -1.24
VIM-207ENST00000495528 EMSYQ7Z589 1322 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 TANC1Q9C0D5 1861 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 C17orf102A2RUQ5 167 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 H3BNC9 293 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 IL33O95760 270 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 ALADP13716 330 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 ACO1P21399 889 aaKnown RBP7.28□□□□□ -1.24
VIM-207ENST00000495528 COMTP21964 271 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 UBA1P22314 1058 aaKnown RBP7.28□□□□□ -1.24
VIM-207ENST00000495528 HOXA13P31271 388 aaPredicted RBP7.28□□□□□ -1.24
VIM-207ENST00000495528 HOXC8P31273 242 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 RAB27AP51159 221 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 SLC16A1P53985 500 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 KRT85P78386 507 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 APBA1Q02410 837 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 PGM5Q15124 567 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 ELAVL1Q15717 326 aaKnown RBP7.28□□□□□ -1.24
VIM-207ENST00000495528 TCEAL5Q5H9L2 206 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 KCNV1Q6PIU1 500 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 ELOA2Q8IYF1 753 aaPredicted RBP7.28□□□□□ -1.24
VIM-207ENST00000495528 PQLC1Q8N2U9 271 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 IL31RAQ8NI17 732 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 STON2Q8WXE9 905 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 SEPT8Q92599 483 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 WWC2-AS2Q96NR7 200 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 YME1L1Q96TA2 773 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 ENKD1Q9H0I2 346 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 MLXIPQ9HAP2 919 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 MSL2Q9HCI7 577 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 CD248Q9HCU0 757 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 TRPS1Q9UHF7 1281 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 PCDHA1Q9Y5I3 950 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 TRANK1O15050 2925 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 PTPRSQ13332 1948 aa7.28□□□□□ -1.24
VIM-207ENST00000495528 KLRF2D3W0D1 207 aa7.27□□□□□ -1.25
VIM-207ENST00000495528 ZBTB5O15062 677 aa7.27□□□□□ -1.25
VIM-207ENST00000495528 ZRANB2O95218 330 aaKnown RBP eCLIP7.27□□□□□ -1.25
VIM-207ENST00000495528 LGALS2P05162 132 aa7.27□□□□□ -1.25
VIM-207ENST00000495528 SMIM10L2AP0DMW4 78 aa7.27□□□□□ -1.25
VIM-207ENST00000495528 SMIM10L2BP0DMW5 78 aa7.27□□□□□ -1.25
VIM-207ENST00000495528 TGFB3P10600 412 aa7.27□□□□□ -1.25
VIM-207ENST00000495528 GZMKP49863 264 aa7.27□□□□□ -1.25
VIM-207ENST00000495528 NT5C2P49902 561 aa7.27□□□□□ -1.25
VIM-207ENST00000495528 HHEXQ03014 270 aa7.27□□□□□ -1.25
VIM-207ENST00000495528 PTH1RQ03431 593 aa7.27□□□□□ -1.25
VIM-207ENST00000495528 SLC35G1Q2M3R5 365 aa7.27□□□□□ -1.25
VIM-207ENST00000495528 HS1BP3Q53T59 392 aa7.27□□□□□ -1.25
VIM-207ENST00000495528 PRAMEF14Q5SWL7 426 aa7.27□□□□□ -1.25
VIM-207ENST00000495528 XYLT1Q86Y38 959 aa7.27□□□□□ -1.25
VIM-207ENST00000495528 RHOT1Q8IXI2 618 aa7.27□□□□□ -1.25
VIM-207ENST00000495528 CPA6Q8N4T0 437 aa7.27□□□□□ -1.25
VIM-207ENST00000495528 ZNF808Q8N4W9 903 aaPredicted RBP7.27□□□□□ -1.25
VIM-207ENST00000495528 OR7D4Q8NG98 312 aa7.27□□□□□ -1.25
VIM-207ENST00000495528 CCHCR1Q8TD31 782 aa7.27□□□□□ -1.25
VIM-207ENST00000495528 RAB24Q969Q5 203 aa7.27□□□□□ -1.25
VIM-207ENST00000495528 PABPC5Q96DU9 382 aaKnown RBP7.27□□□□□ -1.25
VIM-207ENST00000495528 ADOQ96SZ5 270 aa7.27□□□□□ -1.25
VIM-207ENST00000495528 C7orf25Q9BPX7 421 aa7.27□□□□□ -1.25
VIM-207ENST00000495528 IL25Q9H293 177 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms