RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 CFHR1Q03591 330 aa5.02□□□□□ -1.61
ITGB1-216ENST00000493758 MFSD13AQ14CX5 517 aa5.02□□□□□ -1.61
ITGB1-216ENST00000493758 LRCH2Q5VUJ6 765 aa5.02□□□□□ -1.61
ITGB1-216ENST00000493758 SLC18B1Q6NT16 456 aa5.02□□□□□ -1.61
ITGB1-216ENST00000493758 DEF8Q6ZN54 512 aa5.02□□□□□ -1.61
ITGB1-216ENST00000493758 YTHDF3Q7Z739 585 aaKnown RBP5.02□□□□□ -1.61
ITGB1-216ENST00000493758 TXLNBQ8N3L3 684 aa5.02□□□□□ -1.61
ITGB1-216ENST00000493758 TNIP3Q96KP6 325 aa5.02□□□□□ -1.61
ITGB1-216ENST00000493758 HS6ST2Q96MM7 605 aa5.02□□□□□ -1.61
ITGB1-216ENST00000493758 PAAF1Q9BRP4 392 aa5.02□□□□□ -1.61
ITGB1-216ENST00000493758 NLRC4Q9NPP4 1024 aa5.02□□□□□ -1.61
ITGB1-216ENST00000493758 NRIP3Q9NQ35 241 aa5.02□□□□□ -1.61
ITGB1-216ENST00000493758 SMIM35A0A1B0GVV1 85 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 CLIC1O00299 241 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 PODXLO00592 558 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 PCDH17O14917 1159 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 MMP8P22894 467 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 SFPQP23246 707 aaKnown RBP eCLIP5.01□□□□□ -1.61
ITGB1-216ENST00000493758 JAK3P52333 1124 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 WDR5P61964 334 aaKnown RBP5.01□□□□□ -1.61
ITGB1-216ENST00000493758 RAE1P78406 368 aaKnown RBP5.01□□□□□ -1.61
ITGB1-216ENST00000493758 SRSF1Q07955 248 aaKnown RBP eCLIP5.01□□□□□ -1.61
ITGB1-216ENST00000493758 RAB30Q15771 203 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 TRIM71Q2Q1W2 868 aaKnown RBP5.01□□□□□ -1.61
ITGB1-216ENST00000493758 TMTC4Q5T4D3 741 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 ZNF626Q68DY1 528 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 ANO7Q6IWH7 933 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 FBXO38Q6PIJ6 1188 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 RANBP10Q6VN20 620 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 TOGARAM2Q6ZUX3 1019 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 UBE2Q1Q7Z7E8 422 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 SRLQ86TD4 932 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 CCDC146Q8IYE0 955 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 FAM186BQ8IYM0 893 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 FAM71DQ8N9W8 422 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 OR52L2PQ8NGH6 319 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 PARD3BQ8TEW8 1205 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 GLMPQ8WWB7 406 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 ZNF566Q969W8 418 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 KIAA1191Q96A73 305 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 EFHD1Q9BUP0 239 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 SAP30LQ9HAJ7 183 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 SLC52A1Q9NWF4 448 aa5.01□□□□□ -1.61
ITGB1-216ENST00000493758 SIRT4Q9Y6E7 314 aaPredicted RBP5.01□□□□□ -1.61
ITGB1-216ENST00000493758 CCDC194A0A1B0GVG4 234 aa5□□□□□ -1.61
ITGB1-216ENST00000493758 CTIFO43310 598 aaKnown RBP5□□□□□ -1.61
ITGB1-216ENST00000493758 CA12O43570 354 aa5□□□□□ -1.61
ITGB1-216ENST00000493758 CNOT3O75175 753 aaKnown RBP5□□□□□ -1.61
ITGB1-216ENST00000493758 NTSR2O95665 410 aa5□□□□□ -1.61
ITGB1-216ENST00000493758 CYP2D6P10635 497 aa5□□□□□ -1.61
ITGB1-216ENST00000493758 ATP5F1P24539 256 aaPredicted RBP5□□□□□ -1.61
ITGB1-216ENST00000493758 GALNSP34059 522 aa5□□□□□ -1.61
ITGB1-216ENST00000493758 HSF1Q00613 529 aa5□□□□□ -1.61
ITGB1-216ENST00000493758 ZNF268Q14587 947 aaPredicted RBP5□□□□□ -1.61
ITGB1-216ENST00000493758 SEC23BQ15437 767 aa5□□□□□ -1.61
ITGB1-216ENST00000493758 SRSF7Q16629 238 aaKnown RBP eCLIP5□□□□□ -1.61
ITGB1-216ENST00000493758 SUPT20HL1Q3ZLR7 823 aa5□□□□□ -1.61
ITGB1-216ENST00000493758 MTX3Q5HYI7 312 aa5□□□□□ -1.61
ITGB1-216ENST00000493758 TMEM196Q5HYL7 178 aa5□□□□□ -1.61
ITGB1-216ENST00000493758 PAPD7Q5XG87 772 aaKnown RBP5□□□□□ -1.61
ITGB1-216ENST00000493758 PIK3AP1Q6ZUJ8 805 aa5□□□□□ -1.61
ITGB1-216ENST00000493758 P3H2Q8IVL5 708 aa5□□□□□ -1.61
ITGB1-216ENST00000493758 SLC39A13Q96H72 371 aa5□□□□□ -1.61
ITGB1-216ENST00000493758 TMEM41AQ96HV5 264 aa5□□□□□ -1.61
ITGB1-216ENST00000493758 DDX24Q9GZR7 859 aaKnown RBP eCLIP5□□□□□ -1.61
ITGB1-216ENST00000493758 PDGFCQ9NRA1 345 aa5□□□□□ -1.61
ITGB1-216ENST00000493758 ABHD10Q9NUJ1 306 aa5□□□□□ -1.61
ITGB1-216ENST00000493758 FNIP2Q9P278 1114 aa5□□□□□ -1.61
ITGB1-216ENST00000493758 UBE2J1Q9Y385 318 aaPredicted RBP5□□□□□ -1.61
ITGB1-216ENST00000493758 TNFRSF18Q9Y5U5 241 aa5□□□□□ -1.61
ITGB1-216ENST00000493758 FYB1O15117 783 aa4.99□□□□□ -1.61
ITGB1-216ENST00000493758 ABCG1P45844 678 aa4.99□□□□□ -1.61
ITGB1-216ENST00000493758 SLC14A1Q13336 389 aa4.99□□□□□ -1.61
ITGB1-216ENST00000493758 HDAC1Q13547 482 aaPredicted RBP4.99□□□□□ -1.61
ITGB1-216ENST00000493758 ARHGAP15Q53QZ3 475 aa4.99□□□□□ -1.61
ITGB1-216ENST00000493758 CCDC144NLQ6NUI1 221 aa4.99□□□□□ -1.61
ITGB1-216ENST00000493758 XRRA1Q6P2D8 792 aa4.99□□□□□ -1.61
ITGB1-216ENST00000493758 SKAP1Q86WV1 359 aa4.99□□□□□ -1.61
ITGB1-216ENST00000493758 RASGRP3Q8IV61 690 aa4.99□□□□□ -1.61
ITGB1-216ENST00000493758 OSR1Q8TAX0 266 aaPredicted RBP4.99□□□□□ -1.61
ITGB1-216ENST00000493758 MAP4K1Q92918 833 aa4.99□□□□□ -1.61
ITGB1-216ENST00000493758 GRAMD1AQ96CP6 724 aa4.99□□□□□ -1.61
ITGB1-216ENST00000493758 COQ8BQ96D53 544 aa4.99□□□□□ -1.61
ITGB1-216ENST00000493758 TTLL2Q9BWV7 592 aa4.99□□□□□ -1.61
ITGB1-216ENST00000493758 GATA5Q9BWX5 397 aaPredicted RBP4.99□□□□□ -1.61
ITGB1-216ENST00000493758 ADGRE3Q9BY15 652 aa4.99□□□□□ -1.61
ITGB1-216ENST00000493758 KRTAP17-1Q9BYP8 105 aa4.99□□□□□ -1.61
ITGB1-216ENST00000493758 CDCP1Q9H5V8 836 aa4.99□□□□□ -1.61
ITGB1-216ENST00000493758 USP29Q9HBJ7 922 aa4.99□□□□□ -1.61
ITGB1-216ENST00000493758 CHST12Q9NRB3 414 aa4.99□□□□□ -1.61
ITGB1-216ENST00000493758 SLC39A10Q9ULF5 831 aa4.99□□□□□ -1.61
ITGB1-216ENST00000493758 PCDHGB2Q9Y5G2 931 aa4.99□□□□□ -1.61
ITGB1-216ENST00000493758 SPATA31A5Q5VU36 1347 aa4.98□□□□□ -1.61
ITGB1-216ENST00000493758 SPATA31A7Q8IWB4 1347 aa4.98□□□□□ -1.61
ITGB1-216ENST00000493758 FNDC1Q4ZHG4 1894 aaPredicted RBP4.98□□□□□ -1.61
ITGB1-216ENST00000493758 CCDC187A0A096LP49 1063 aa4.98□□□□□ -1.61
ITGB1-216ENST00000493758 FCHO1O14526 889 aa4.98□□□□□ -1.61
ITGB1-216ENST00000493758 ZSCAN9O15535 394 aaPredicted RBP4.98□□□□□ -1.61
ITGB1-216ENST00000493758 TOP3BO95985 862 aaKnown RBP4.98□□□□□ -1.61
ITGB1-216ENST00000493758 ITGA5P08648 1049 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms