RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 POMKQ9H5K3 350 aa7.14□□□□□ -1.27
VPS52-219ENST00000493379 CYP4F11Q9HBI6 524 aa7.14□□□□□ -1.27
VPS52-219ENST00000493379 PNPLA8Q9NP80 782 aa7.14□□□□□ -1.27
VPS52-219ENST00000493379 SIX2Q9NPC8 291 aa7.14□□□□□ -1.27
VPS52-219ENST00000493379 PLCB1Q9NQ66 1216 aa7.14□□□□□ -1.27
VPS52-219ENST00000493379 CISHQ9NSE2 258 aa7.14□□□□□ -1.27
VPS52-219ENST00000493379 COMMD8Q9NX08 183 aa7.14□□□□□ -1.27
VPS52-219ENST00000493379 EPS15L1Q9UBC2 864 aa7.14□□□□□ -1.27
VPS52-219ENST00000493379 DAAM1Q9Y4D1 1078 aa7.14□□□□□ -1.27
VPS52-219ENST00000493379 TMEM8BA6NDV4 472 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 A8MXQ7 604 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 ANHXE9PGG2 379 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 PYCARD-AS1I3L0S3 204 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 ZNF197O14709 1029 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 MMP20O60882 483 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 NOL4O94818 638 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 FGF19O95750 216 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 USP17L7P0C7H9 530 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 CPB1P15086 417 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 ATF6P18850 670 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 SLC9A1P19634 815 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 ACAT1P24752 427 aaKnown RBP7.13□□□□□ -1.27
VPS52-219ENST00000493379 CYP2F1P24903 491 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 RPL34P49207 117 aaKnown RBP7.13□□□□□ -1.27
VPS52-219ENST00000493379 ZNF132P52740 706 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 ZNF445P59923 1031 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 RPL10AP62906 217 aaKnown RBP7.13□□□□□ -1.27
VPS52-219ENST00000493379 C19orf57Q0VDD7 668 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 TWF1Q12792 350 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 GRM2Q14416 872 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 KRT31Q15323 416 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 DBN1Q16643 649 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 EXOC3L4Q17RC7 722 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 ANO6Q4KMQ2 910 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 RARS2Q5T160 578 aaKnown RBP7.13□□□□□ -1.27
VPS52-219ENST00000493379 SNX30Q5VWJ9 437 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 GBP6Q6ZN66 633 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 DNAJB7Q7Z6W7 309 aaPredicted RBP7.13□□□□□ -1.27
VPS52-219ENST00000493379 TMEM150AQ86TG1 271 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 ZNF276Q8N554 614 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 TTC9BQ8N6N2 239 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 KIAA1958Q8N8K9 716 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 SLC4A11Q8NBS3 891 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 ZMIZ2Q8NF64 920 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 OR13H1Q8NG92 308 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 SHC3Q92529 594 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 SMG7Q92540 1137 aaKnown RBP7.13□□□□□ -1.27
VPS52-219ENST00000493379 SECISBP2LQ93073 1101 aaKnown RBP7.13□□□□□ -1.27
VPS52-219ENST00000493379 TMEM176AQ96HP8 235 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 ZNF512Q96ME7 567 aaPredicted RBP7.13□□□□□ -1.27
VPS52-219ENST00000493379 KREMEN1Q96MU8 473 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 NT5C1BQ96P26 610 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 TWNKQ96RR1 684 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 GPR88Q9GZN0 384 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 ELOVL4Q9GZR5 314 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 DPEP3Q9H4B8 488 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 SUV39H2Q9H5I1 410 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 TRPV4Q9HBA0 871 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 NDFIP2Q9NV92 336 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 TMEM30AQ9NV96 361 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 GDE1Q9NZC3 331 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 ZFATQ9P243 1243 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 MAGEC2Q9UBF1 373 aaPredicted RBP7.13□□□□□ -1.27
VPS52-219ENST00000493379 ZMYM5Q9UJ78 669 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 FBXL21Q9UKT6 434 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 YIPF1Q9Y548 306 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 C2CD3Q4AC94 2353 aa7.13□□□□□ -1.27
VPS52-219ENST00000493379 NOTCH4Q99466 2003 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 NCANO14594 1321 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 CLUHO75153 1309 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 SYCE3A1L190 88 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 KRBA1A5PL33 1030 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 HHLA1C9JL84 531 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 RNF225M0QZC1 329 aaPredicted RBP7.12□□□□□ -1.27
VPS52-219ENST00000493379 PRRG1O14668 218 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 BNIP3LO60238 219 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 LRG1P02750 347 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 RHOP08100 348 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 ZDHHC11BP0C7U3 371 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 CSH1P0DML2 217 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 CSH2P0DML3 217 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 VDRP11473 427 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 LAMP2P13473 410 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 GLULP15104 373 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 PFKLP17858 780 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 CA8P35219 290 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 MTIF2P46199 727 aaKnown RBP7.12□□□□□ -1.27
VPS52-219ENST00000493379 ALDH1A3P47895 512 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 PPP3CCP48454 512 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 EPHB3P54753 998 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 ARPP19P56211 112 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 YWHAEP62258 255 aaKnown RBP7.12□□□□□ -1.27
VPS52-219ENST00000493379 CNGA2Q16280 664 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 TPD52L1Q16890 204 aaPredicted RBP7.12□□□□□ -1.27
VPS52-219ENST00000493379 RAB41Q5JT25 222 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 MEI1Q5TIA1 1274 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 KLHDC7AQ5VTJ3 777 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 PEAR1Q5VY43 1037 aaPredicted RBP7.12□□□□□ -1.27
VPS52-219ENST00000493379 GAREM2Q75VX8 874 aa7.12□□□□□ -1.27
VPS52-219ENST00000493379 OTOP3Q7RTS5 596 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms