RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 CASTOR2A6NHX0 329 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 PIK3CDO00329 1044 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 XPO1O14980 1071 aaKnown RBP16.75■□□□□ 0.27
BRAT1-206ENST00000493232 GLRBP48167 497 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 ALDH6A1Q02252 535 aaKnown RBP16.75■□□□□ 0.27
BRAT1-206ENST00000493232 TMC7Q7Z402 723 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 EMC1Q8N766 993 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 MRPL48Q96GC5 212 aaKnown RBP16.75■□□□□ 0.27
BRAT1-206ENST00000493232 SERPINB11Q96P15 392 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 POLG2Q9UHN1 485 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 TRHDEQ9UKU6 1024 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 IFRD1O00458 451 aaPredicted RBP16.75■□□□□ 0.27
BRAT1-206ENST00000493232 SLC16A1P53985 500 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 TBX4P57082 545 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 PAEPP09466 180 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 ZNF23P17027 643 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 SHMT1P34896 483 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 RARRES1P49788 294 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 ZNF135P52742 658 aaPredicted RBP16.75■□□□□ 0.27
BRAT1-206ENST00000493232 ACTL9Q8TC94 416 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 SOCS4Q8WXH5 440 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 RSPH1Q8WYR4 309 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 HPS4Q9NQG7 708 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 KRT84Q9NSB2 600 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 PDP2Q9P2J9 529 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 RPS6KB2Q9UBS0 482 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 TSPAN16Q9UKR8 245 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 PDHXO00330 501 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 KIF1CO43896 1103 aaKnown RBP16.75■□□□□ 0.27
BRAT1-206ENST00000493232 RAMP2O60895 175 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 KRT6AP02538 564 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 KRT6BP04259 564 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 FCGR1AP12314 374 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 CALB2P22676 271 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 KRT6CP48668 564 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 PRKAA2P54646 552 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 NUP107P57740 925 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 MMRN1Q13201 1228 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 HASPINQ8TF76 798 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 PPP1R10Q96QC0 940 aaKnown RBP16.75■□□□□ 0.27
BRAT1-206ENST00000493232 ZCCHC2Q9C0B9 1178 aaKnown RBP16.75■□□□□ 0.27
BRAT1-206ENST00000493232 CYP4F12Q9HCS2 524 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 AHSPQ9NZD4 102 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 TAGLN3Q9UI15 199 aa16.75■□□□□ 0.27
BRAT1-206ENST00000493232 GNG14A0A1W2PPG7 69 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 PBLDP30039 288 aaPredicted RBP16.74■□□□□ 0.27
BRAT1-206ENST00000493232 CD151P48509 253 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 APOL2Q9BQE5 337 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 CAAP1Q9H8G2 361 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 hCG_2014768A0A024R1R8 64 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 FAM47E-STBD1D6RA91 191 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 TPST1O60507 370 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 ERVK-10P10266 1014 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 PYGMP11217 842 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 NR2C2P49116 596 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 SCNN1BP51168 640 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 CSHL1Q14406 222 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 SLC5A5Q92911 643 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 VPS33AQ96AX1 596 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 ABHD16BQ9H3Z7 469 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 CAPN10Q9HC96 672 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 KCNQ5Q9NR82 932 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 AP4S1Q9Y587 144 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 CARNS1A5YM72 827 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 RTN3O95197 1032 aaPredicted RBP16.74■□□□□ 0.27
BRAT1-206ENST00000493232 AKR1A1P14550 325 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 HALP42357 657 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 NDST1P52848 882 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 STARD3Q14849 445 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 TRIP4Q15650 581 aaPredicted RBP16.74■□□□□ 0.27
BRAT1-206ENST00000493232 PKN1Q16512 942 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 CCDC81Q6ZN84 652 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 ACTR8Q9H981 624 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 OSGEPQ9NPF4 335 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 CYP39A1Q9NYL5 469 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 TMEM114B3SHH9 223 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 ACKR2O00590 384 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 GUCA1AP43080 201 aaPredicted RBP16.74■□□□□ 0.27
BRAT1-206ENST00000493232 AQP5P55064 265 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 PTENP60484 403 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 MAD2L1Q13257 205 aaPredicted RBP16.74■□□□□ 0.27
BRAT1-206ENST00000493232 NTRK3Q16288 839 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 PGS1Q32NB8 556 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 FBXO25Q8TCJ0 367 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 SH3GL3Q99963 347 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 OSBPL10Q9BXB5 764 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 ELOVL4Q9GZR5 314 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 THG1LQ9NWX6 298 aaKnown RBP16.74■□□□□ 0.27
BRAT1-206ENST00000493232 ARHGAP20Q9P2F6 1191 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 MYL4P12829 197 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 CYP2A7P20853 494 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 NPY2RP49146 381 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 YWHAZP63104 245 aaKnown RBP16.74■□□□□ 0.27
BRAT1-206ENST00000493232 PREPLQ4J6C6 727 aaPredicted RBP16.74■□□□□ 0.27
BRAT1-206ENST00000493232 APLFQ8IW19 511 aaPredicted RBP16.74■□□□□ 0.27
BRAT1-206ENST00000493232 SCUBE1Q8IWY4 988 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 CNBD2Q96M20 576 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 DMAP1Q9NPF5 467 aaPredicted RBP16.74■□□□□ 0.27
BRAT1-206ENST00000493232 SYNPO2Q9UMS6 1093 aa16.74■□□□□ 0.27
BRAT1-206ENST00000493232 SLIT1O75093 1534 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms