RNA–Protein interactions for RNA: ENST00000492185.5

NELFE-211, Transcript of negative elongation factor complex member E, humanhuman

TSL 2

Gene NELFE, Length 1,786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-211ENST00000492185 KCNJ11Q14654 390 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 FASTKD3Q14CZ7 662 aaKnown RBP20.72■□□□□ 0.91
NELFE-211ENST00000492185 HIF1AQ16665 826 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 LONRF1Q17RB8 773 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 LRRC8DQ7L1W4 858 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 CDKL3Q8IVW4 592 aaPredicted RBP20.72■□□□□ 0.91
NELFE-211ENST00000492185 OLFM3Q96PB7 478 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 QKIQ96PU8 341 aaKnown RBP eCLIP20.72■□□□□ 0.91
NELFE-211ENST00000492185 DMAP1Q9NPF5 467 aaPredicted RBP20.72■□□□□ 0.91
NELFE-211ENST00000492185 PIGVQ9NUD9 493 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 SAGE1Q9NXZ1 904 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 PAK5Q9P286 719 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 NAALADL1Q9UQQ1 740 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 SF3B1O75533 1304 aaKnown RBP eCLIP20.72■□□□□ 0.911e-19■■■■■ 448
NELFE-211ENST00000492185 A0A087WUV0 522 aaPredicted RBP20.72■□□□□ 0.91
NELFE-211ENST00000492185 F8W810 466 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 M0QYT0 321 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 IVLP07476 585 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 SLCO1A2P46721 670 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 ARL4CP56559 192 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 GBE1Q04446 702 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 GPNMBQ14956 572 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 SLC45A4Q5BKX6 768 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 NCBP2-AS2Q69YL0 99 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 TTC19Q6DKK2 380 aaPredicted RBP20.72■□□□□ 0.91
NELFE-211ENST00000492185 BEND5Q7L4P6 421 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 ZNF280BQ86YH2 543 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 THEM5Q8N1Q8 247 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 PYROXD2Q8N2H3 581 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 CENPTQ96BT3 561 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 RHOBTB2Q9BYZ6 727 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.72■□□□□ 0.91
NELFE-211ENST00000492185 KANSL3Q9P2N6 904 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 HEY1Q9Y5J3 304 aa20.72■□□□□ 0.91
NELFE-211ENST00000492185 VWA8A3KMH1 1905 aa20.71■□□□□ 0.91
NELFE-211ENST00000492185 TCRBV7S3A2A0A539 114 aa20.71■□□□□ 0.91
NELFE-211ENST00000492185 SMIM23A6NLE4 172 aa20.71■□□□□ 0.91
NELFE-211ENST00000492185 KBTBD13C9JR72 458 aa20.71■□□□□ 0.91
NELFE-211ENST00000492185 CHADO15335 359 aa20.71■□□□□ 0.91
NELFE-211ENST00000492185 USP17L7P0C7H9 530 aa20.71■□□□□ 0.91
NELFE-211ENST00000492185 YY1P25490 414 aa20.71■□□□□ 0.91
NELFE-211ENST00000492185 RBL1P28749 1068 aa20.71■□□□□ 0.91
NELFE-211ENST00000492185 NRLP54845 237 aa20.71■□□□□ 0.91
NELFE-211ENST00000492185 GAD2Q05329 585 aa20.71■□□□□ 0.91
NELFE-211ENST00000492185 DEUP1Q05D60 604 aa20.71■□□□□ 0.91
NELFE-211ENST00000492185 SEMA3BQ13214 749 aa20.71■□□□□ 0.91
NELFE-211ENST00000492185 C4orf22Q6V702 233 aa20.71■□□□□ 0.91
NELFE-211ENST00000492185 TDRPQ86YL5 185 aa20.71■□□□□ 0.91
NELFE-211ENST00000492185 FAM126BQ8IXS8 530 aa20.71■□□□□ 0.91
NELFE-211ENST00000492185 URGCPQ8TCY9 931 aa20.71■□□□□ 0.91
NELFE-211ENST00000492185 HASPINQ8TF76 798 aa20.71■□□□□ 0.91
NELFE-211ENST00000492185 TMEM209Q96SK2 561 aa20.71■□□□□ 0.91
NELFE-211ENST00000492185 ELAC1Q9H777 363 aaKnown RBP20.71■□□□□ 0.91
NELFE-211ENST00000492185 ARHGEF4Q9NR80 690 aa20.71■□□□□ 0.91
NELFE-211ENST00000492185 TMEM161AQ9NX61 479 aa20.71■□□□□ 0.91
NELFE-211ENST00000492185 KCNN4O15554 427 aa20.7■□□□□ 0.9
NELFE-211ENST00000492185 DGKIO75912 1065 aa20.7■□□□□ 0.9
NELFE-211ENST00000492185 TSHRP16473 764 aa20.7■□□□□ 0.9
NELFE-211ENST00000492185 GOT1P17174 413 aa20.7■□□□□ 0.9
NELFE-211ENST00000492185 IBSPP21815 317 aaPredicted RBP20.7■□□□□ 0.9
NELFE-211ENST00000492185 BDNFP23560 247 aa20.7■□□□□ 0.9
NELFE-211ENST00000492185 ARL4AP40617 200 aa20.7■□□□□ 0.9
NELFE-211ENST00000492185 PDIA2Q13087 525 aaKnown RBP20.7■□□□□ 0.9
NELFE-211ENST00000492185 RASA2Q15283 850 aa20.7■□□□□ 0.9
NELFE-211ENST00000492185 MSS51Q4VC12 460 aa20.7■□□□□ 0.9
NELFE-211ENST00000492185 FNBP1LQ5T0N5 605 aa20.7■□□□□ 0.9
NELFE-211ENST00000492185 RIBC1Q8N443 379 aaPredicted RBP20.7■□□□□ 0.9
NELFE-211ENST00000492185 RNF139Q8WU17 664 aa20.7■□□□□ 0.9
NELFE-211ENST00000492185 CCDC77Q9BR77 488 aa20.7■□□□□ 0.9
NELFE-211ENST00000492185 WDR83Q9BRX9 315 aaKnown RBP20.7■□□□□ 0.9
NELFE-211ENST00000492185 EPN3Q9H201 632 aa20.7■□□□□ 0.9
NELFE-211ENST00000492185 ETNK2Q9NVF9 386 aa20.7■□□□□ 0.9
NELFE-211ENST00000492185 TBC1D13Q9NVG8 400 aa20.7■□□□□ 0.9
NELFE-211ENST00000492185 DTLQ9NZJ0 730 aa20.7■□□□□ 0.9
NELFE-211ENST00000492185 TTC3P53804 2025 aa20.7■□□□□ 0.9
NELFE-211ENST00000492185 TET1Q8NFU7 2136 aa20.7■□□□□ 0.9
NELFE-211ENST00000492185 CLUHO75153 1309 aa20.69■□□□□ 0.9
NELFE-211ENST00000492185 HACD1B0YJ81 288 aa20.69■□□□□ 0.9
NELFE-211ENST00000492185 E7EVH7 732 aa20.69■□□□□ 0.9
NELFE-211ENST00000492185 H3BRJ5 948 aa20.69■□□□□ 0.9
NELFE-211ENST00000492185 DNM1LO00429 736 aa20.69■□□□□ 0.9
NELFE-211ENST00000492185 CDH16O75309 829 aa20.69■□□□□ 0.9
NELFE-211ENST00000492185 GCATO75600 419 aa20.69■□□□□ 0.9
NELFE-211ENST00000492185 OAZ2O95190 189 aa20.69■□□□□ 0.9
NELFE-211ENST00000492185 AMPD1P23109 780 aa20.69■□□□□ 0.9
NELFE-211ENST00000492185 ADRA1BP35368 520 aa20.69■□□□□ 0.9
NELFE-211ENST00000492185 TSPY1Q01534 308 aa20.69■□□□□ 0.9
NELFE-211ENST00000492185 DPYSQ14117 519 aa20.69■□□□□ 0.9
NELFE-211ENST00000492185 B4GALNT4Q76KP1 1039 aa20.69■□□□□ 0.9
NELFE-211ENST00000492185 EXOC3L1Q86VI1 746 aa20.69■□□□□ 0.9
NELFE-211ENST00000492185 FBXW11Q9UKB1 542 aa20.69■□□□□ 0.9
NELFE-211ENST00000492185 NBNO60934 754 aa20.69■□□□□ 0.9
NELFE-211ENST00000492185 CDR1P51861 262 aa20.69■□□□□ 0.9
NELFE-211ENST00000492185 RNASELQ05823 741 aaKnown RBP20.69■□□□□ 0.9
NELFE-211ENST00000492185 PLEKHG4Q58EX7 1191 aa20.69■□□□□ 0.9
NELFE-211ENST00000492185 CCDC13Q8IYE1 715 aa20.69■□□□□ 0.9
NELFE-211ENST00000492185 SLC7A14Q8TBB6 771 aa20.69■□□□□ 0.9
NELFE-211ENST00000492185 FRMD8Q9BZ67 464 aaPredicted RBP20.69■□□□□ 0.9
NELFE-211ENST00000492185 PPCSQ9HAB8 311 aa20.69■□□□□ 0.9
NELFE-211ENST00000492185 XPO7Q9UIA9 1087 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms