RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 MEA1Q16626 185 aa15.78■□□□□ 0.12
USP39-217ENST00000491659 VWA3BQ502W6 1294 aa15.78■□□□□ 0.12
USP39-217ENST00000491659 HSP90AA4PQ58FG1 418 aa15.78■□□□□ 0.12
USP39-217ENST00000491659 EOGTQ5NDL2 527 aa15.78■□□□□ 0.12
USP39-217ENST00000491659 TRMT11Q7Z4G4 463 aaKnown RBP15.78■□□□□ 0.12
USP39-217ENST00000491659 DENND1CQ8IV53 801 aa15.78■□□□□ 0.12
USP39-217ENST00000491659 SFTPA1Q8IWL2 248 aa15.78■□□□□ 0.12
USP39-217ENST00000491659 CCDC33Q8N5R6 958 aa15.78■□□□□ 0.12
USP39-217ENST00000491659 ALLCQ8N6M5 410 aa15.78■□□□□ 0.12
USP39-217ENST00000491659 GPR161Q8N6U8 529 aaKnown RBP15.78■□□□□ 0.12
USP39-217ENST00000491659 TXNDC5Q8NBS9 432 aaKnown RBP15.78■□□□□ 0.12
USP39-217ENST00000491659 GPT2Q8TD30 523 aa15.78■□□□□ 0.12
USP39-217ENST00000491659 TUBGCP2Q9BSJ2 902 aa15.78■□□□□ 0.12
USP39-217ENST00000491659 NDST4Q9H3R1 872 aa15.78■□□□□ 0.12
USP39-217ENST00000491659 GVINP1Q7Z2Y8 2422 aa15.77■□□□□ 0.12
USP39-217ENST00000491659 SART1O43290 800 aaKnown RBP15.77■□□□□ 0.12
USP39-217ENST00000491659 ALDH1A2O94788 518 aa15.77■□□□□ 0.12
USP39-217ENST00000491659 LTFP02788 710 aa15.77■□□□□ 0.12
USP39-217ENST00000491659 KLKB1P03952 638 aa15.77■□□□□ 0.12
USP39-217ENST00000491659 CYBBP04839 570 aa15.77■□□□□ 0.12
USP39-217ENST00000491659 ACADSBP45954 432 aa15.77■□□□□ 0.12
USP39-217ENST00000491659 HARS2P49590 506 aaKnown RBP15.77■□□□□ 0.12
USP39-217ENST00000491659 DGKGP49619 791 aa15.77■□□□□ 0.12
USP39-217ENST00000491659 DGKEP52429 567 aa15.77■□□□□ 0.12
USP39-217ENST00000491659 CRY1Q16526 586 aa15.77■□□□□ 0.12
USP39-217ENST00000491659 CPXM2Q8N436 756 aa15.77■□□□□ 0.12
USP39-217ENST00000491659 ZNF513Q8N8E2 541 aaPredicted RBP15.77■□□□□ 0.12
USP39-217ENST00000491659 IL17RCQ8NAC3 791 aa15.77■□□□□ 0.12
USP39-217ENST00000491659 KCNV2Q8TDN2 545 aa15.77■□□□□ 0.12
USP39-217ENST00000491659 ZNF606Q8WXB4 792 aa15.77■□□□□ 0.12
USP39-217ENST00000491659 BHMTQ93088 406 aa15.77■□□□□ 0.12
USP39-217ENST00000491659 MIS12Q9H081 205 aa15.77■□□□□ 0.12
USP39-217ENST00000491659 EBF1Q9UH73 591 aa15.77■□□□□ 0.12
USP39-217ENST00000491659 SFMBT1Q9UHJ3 866 aa15.77■□□□□ 0.12
USP39-217ENST00000491659 AGO1Q9UL18 857 aaKnown RBP15.77■□□□□ 0.12
USP39-217ENST00000491659 SPAG17Q6Q759 2223 aa15.77■□□□□ 0.12
USP39-217ENST00000491659 ZNF292O60281 2723 aa15.76■□□□□ 0.11
USP39-217ENST00000491659 MBD3O95983 291 aa15.76■□□□□ 0.11
USP39-217ENST00000491659 RETP07949 1114 aa15.76■□□□□ 0.11
USP39-217ENST00000491659 EEF1GP26641 437 aaKnown RBP15.76■□□□□ 0.11
USP39-217ENST00000491659 GPD2P43304 727 aa15.76■□□□□ 0.11
USP39-217ENST00000491659 KIR2DL1P43626 348 aaPredicted RBP15.76■□□□□ 0.11
USP39-217ENST00000491659 APBA1Q02410 837 aa15.76■□□□□ 0.11
USP39-217ENST00000491659 TRIP4Q15650 581 aaPredicted RBP15.76■□□□□ 0.11
USP39-217ENST00000491659 SMYD5Q6GMV2 418 aa15.76■□□□□ 0.11
USP39-217ENST00000491659 ANO7Q6IWH7 933 aa15.76■□□□□ 0.11
USP39-217ENST00000491659 MSANTD2Q6P1R3 559 aa15.76■□□□□ 0.11
USP39-217ENST00000491659 DENND1BQ6P3S1 775 aa15.76■□□□□ 0.11
USP39-217ENST00000491659 RBM43Q6ZSC3 357 aaKnown RBP15.76■□□□□ 0.11
USP39-217ENST00000491659 CLEC4CQ8WTT0 213 aa15.76■□□□□ 0.11
USP39-217ENST00000491659 SHC3Q92529 594 aa15.76■□□□□ 0.11
USP39-217ENST00000491659 FAM149B1Q96BN6 582 aa15.76■□□□□ 0.11
USP39-217ENST00000491659 TRIM62Q9BVG3 475 aa15.76■□□□□ 0.11
USP39-217ENST00000491659 POLMQ9NP87 494 aaPredicted RBP15.76■□□□□ 0.11
USP39-217ENST00000491659 PLK2Q9NYY3 685 aa15.76■□□□□ 0.11
USP39-217ENST00000491659 DNAJC12Q9UKB3 198 aa15.76■□□□□ 0.11
USP39-217ENST00000491659 USP18Q9UMW8 372 aa15.76■□□□□ 0.11
USP39-217ENST00000491659 NFE2L3Q9Y4A8 694 aa15.76■□□□□ 0.11
USP39-217ENST00000491659 RALGAPA1Q6GYQ0 2036 aa15.76■□□□□ 0.11
USP39-217ENST00000491659 PTPRZ1P23471 2315 aaPredicted RBP15.76■□□□□ 0.11
USP39-217ENST00000491659 ANTXRLA6NF34 631 aa15.75■□□□□ 0.11
USP39-217ENST00000491659 BECN2A8MW95 431 aa15.75■□□□□ 0.11
USP39-217ENST00000491659 SGK1O00141 431 aa15.75■□□□□ 0.11
USP39-217ENST00000491659 TRIM24O15164 1050 aa15.75■□□□□ 0.11
USP39-217ENST00000491659 MSI1O43347 362 aaKnown RBP15.75■□□□□ 0.11
USP39-217ENST00000491659 GABBR2O75899 941 aa15.75■□□□□ 0.11
USP39-217ENST00000491659 LATS1O95835 1130 aa15.75■□□□□ 0.11
USP39-217ENST00000491659 PENKP01210 267 aaPredicted RBP15.75■□□□□ 0.11
USP39-217ENST00000491659 ZNF445P59923 1031 aa15.75■□□□□ 0.11
USP39-217ENST00000491659 TCP11X2Q5H9J9 407 aa15.75■□□□□ 0.11
USP39-217ENST00000491659 MIIPQ5JXC2 388 aa15.75■□□□□ 0.11
USP39-217ENST00000491659 EMC10Q5UCC4 262 aa15.75■□□□□ 0.11
USP39-217ENST00000491659 FYB2Q5VWT5 728 aa15.75■□□□□ 0.11
USP39-217ENST00000491659 SASS6Q6UVJ0 657 aa15.75■□□□□ 0.11
USP39-217ENST00000491659 CACNA2D4Q7Z3S7 1137 aa15.75■□□□□ 0.11
USP39-217ENST00000491659 FAM160A2Q8N612 972 aaPredicted RBP15.75■□□□□ 0.11
USP39-217ENST00000491659 ENOX1Q8TC92 643 aaKnown RBP15.75■□□□□ 0.11
USP39-217ENST00000491659 STK32AQ8WU08 396 aa15.75■□□□□ 0.11
USP39-217ENST00000491659 SIX2Q9NPC8 291 aa15.75■□□□□ 0.11
USP39-217ENST00000491659 ZDHHC4Q9NPG8 344 aa15.75■□□□□ 0.11
USP39-217ENST00000491659 ACP6Q9NPH0 428 aa15.75■□□□□ 0.11
USP39-217ENST00000491659 SAMSN1Q9NSI8 373 aaKnown RBP15.75■□□□□ 0.11
USP39-217ENST00000491659 BCCIPQ9P287 314 aaKnown RBP eCLIP15.75■□□□□ 0.11
USP39-217ENST00000491659 EP300Q09472 2414 aaPredicted RBP15.75■□□□□ 0.11
USP39-217ENST00000491659 LRP3O75074 770 aa15.74■□□□□ 0.11
USP39-217ENST00000491659 TPM2P07951 284 aa15.74■□□□□ 0.11
USP39-217ENST00000491659 CHRM1P11229 460 aaPredicted RBP15.74■□□□□ 0.11
USP39-217ENST00000491659 NCAM1P13591 858 aa15.74■□□□□ 0.11
USP39-217ENST00000491659 RPL34P49207 117 aaKnown RBP15.74■□□□□ 0.11
USP39-217ENST00000491659 PTK2Q05397 1052 aa15.74■□□□□ 0.11
USP39-217ENST00000491659 PDCLQ13371 301 aa15.74■□□□□ 0.11
USP39-217ENST00000491659 STX1AQ16623 288 aa15.74■□□□□ 0.11
USP39-217ENST00000491659 USP39Q53GS9 565 aaKnown RBP15.74■□□□□ 0.11
USP39-217ENST00000491659 NUGGCQ68CJ6 796 aa15.74■□□□□ 0.11
USP39-217ENST00000491659 SDE2Q6IQ49 451 aa15.74■□□□□ 0.11
USP39-217ENST00000491659 TMEM92Q6UXU6 159 aa15.74■□□□□ 0.11
USP39-217ENST00000491659 TOGARAM2Q6ZUX3 1019 aa15.74■□□□□ 0.11
USP39-217ENST00000491659 RASSF3Q86WH2 238 aa15.74■□□□□ 0.11
USP39-217ENST00000491659 FAM217AQ8IXS0 508 aa15.74■□□□□ 0.11
USP39-217ENST00000491659 MDGA1Q8NFP4 955 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms