RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 HSFY1Q96LI6 401 aa20.67■□□□□ 0.9
SMC4-222ENST00000490207 ABCC13Q9NSE7 274 aa20.67■□□□□ 0.9
SMC4-222ENST00000490207 GOLGA6L22H0YM25 854 aa20.66■□□□□ 0.9
SMC4-222ENST00000490207 TRIM24O15164 1050 aa20.66■□□□□ 0.9
SMC4-222ENST00000490207 MED7O43513 233 aa20.66■□□□□ 0.9
SMC4-222ENST00000490207 GABBR2O75899 941 aa20.66■□□□□ 0.9
SMC4-222ENST00000490207 LETM1O95202 739 aaPredicted RBP20.66■□□□□ 0.9
SMC4-222ENST00000490207 PRKCSHP14314 528 aaPredicted RBP20.66■□□□□ 0.9
SMC4-222ENST00000490207 PON1P27169 355 aa20.66■□□□□ 0.9
SMC4-222ENST00000490207 GNA15P30679 374 aa20.66■□□□□ 0.9
SMC4-222ENST00000490207 APBA1Q02410 837 aa20.66■□□□□ 0.9
SMC4-222ENST00000490207 HSP90AA4PQ58FG1 418 aa20.66■□□□□ 0.9
SMC4-222ENST00000490207 DENND1CQ8IV53 801 aa20.66■□□□□ 0.9
SMC4-222ENST00000490207 GPT2Q8TD30 523 aa20.66■□□□□ 0.9
SMC4-222ENST00000490207 BHMTQ93088 406 aa20.66■□□□□ 0.9
SMC4-222ENST00000490207 EBF1Q9UH73 591 aa20.66■□□□□ 0.9
SMC4-222ENST00000490207 SFMBT1Q9UHJ3 866 aa20.66■□□□□ 0.9
SMC4-222ENST00000490207 AGO1Q9UL18 857 aaKnown RBP20.66■□□□□ 0.9
SMC4-222ENST00000490207 THAP12O43422 761 aa20.65■□□□□ 0.9
SMC4-222ENST00000490207 FBXO21O94952 628 aa20.65■□□□□ 0.9
SMC4-222ENST00000490207 CHKAP35790 457 aa20.65■□□□□ 0.9
SMC4-222ENST00000490207 USP8P40818 1118 aa20.65■□□□□ 0.9
SMC4-222ENST00000490207 CRY1Q16526 586 aa20.65■□□□□ 0.9
SMC4-222ENST00000490207 MEA1Q16626 185 aa20.65■□□□□ 0.9
SMC4-222ENST00000490207 CT47A1Q5JQC4 288 aaPredicted RBP20.65■□□□□ 0.9
SMC4-222ENST00000490207 EOGTQ5NDL2 527 aa20.65■□□□□ 0.9
SMC4-222ENST00000490207 EMC10Q5UCC4 262 aa20.65■□□□□ 0.9
SMC4-222ENST00000490207 FAM160A2Q8N612 972 aaPredicted RBP20.65■□□□□ 0.9
SMC4-222ENST00000490207 GPR161Q8N6U8 529 aaKnown RBP20.65■□□□□ 0.9
SMC4-222ENST00000490207 ZNF513Q8N8E2 541 aaPredicted RBP20.65■□□□□ 0.9
SMC4-222ENST00000490207 CLEC4CQ8WTT0 213 aa20.65■□□□□ 0.9
SMC4-222ENST00000490207 GOLGA1Q92805 767 aa20.65■□□□□ 0.9
SMC4-222ENST00000490207 ZDHHC4Q9NPG8 344 aa20.65■□□□□ 0.9
SMC4-222ENST00000490207 PLK2Q9NYY3 685 aa20.65■□□□□ 0.9
SMC4-222ENST00000490207 HBS1LQ9Y450 684 aaKnown RBP20.65■□□□□ 0.9
SMC4-222ENST00000490207 RALGAPA1Q6GYQ0 2036 aa20.65■□□□□ 0.9
SMC4-222ENST00000490207 BECN2A8MW95 431 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 SGK1O00141 431 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 LTFP02788 710 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 RETP07949 1114 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 GPD2P43304 727 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 DGKGP49619 791 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 DGKEP52429 567 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 TRIP4Q15650 581 aaPredicted RBP20.64■□□□□ 0.89
SMC4-222ENST00000490207 VWA3BQ502W6 1294 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 ANO7Q6IWH7 933 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 MSANTD2Q6P1R3 559 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 DENND1BQ6P3S1 775 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 TMEM92Q6UXU6 159 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 CACNA2D4Q7Z3S7 1137 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 TRMT11Q7Z4G4 463 aaKnown RBP20.64■□□□□ 0.89
SMC4-222ENST00000490207 ZNF606Q8WXB4 792 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 SHC3Q92529 594 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 TUBGCP2Q9BSJ2 902 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 MIS12Q9H081 205 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 NDST4Q9H3R1 872 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 SIX2Q9NPC8 291 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 ACP6Q9NPH0 428 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 ST7Q9NRC1 585 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 USP18Q9UMW8 372 aa20.64■□□□□ 0.89
SMC4-222ENST00000490207 MYO18AQ92614 2054 aaKnown RBP20.64■□□□□ 0.89
SMC4-222ENST00000490207 KCNJ18B7U540 433 aa20.63■□□□□ 0.89
SMC4-222ENST00000490207 MSI1O43347 362 aaKnown RBP20.63■□□□□ 0.89
SMC4-222ENST00000490207 PENKP01210 267 aaPredicted RBP20.63■□□□□ 0.89
SMC4-222ENST00000490207 CYBBP04839 570 aa20.63■□□□□ 0.89
SMC4-222ENST00000490207 HNRNPLP14866 589 aaKnown RBP eCLIP20.63■□□□□ 0.89
SMC4-222ENST00000490207 ACADSBP45954 432 aa20.63■□□□□ 0.89
SMC4-222ENST00000490207 RPL34P49207 117 aaKnown RBP20.63■□□□□ 0.89
SMC4-222ENST00000490207 HARS2P49590 506 aaKnown RBP20.63■□□□□ 0.89
SMC4-222ENST00000490207 SPEM2Q0P670 501 aa20.63■□□□□ 0.89
SMC4-222ENST00000490207 KCNJ12Q14500 433 aa20.63■□□□□ 0.89
SMC4-222ENST00000490207 MIIPQ5JXC2 388 aa20.63■□□□□ 0.89
SMC4-222ENST00000490207 FYB2Q5VWT5 728 aa20.63■□□□□ 0.89
SMC4-222ENST00000490207 RBM43Q6ZSC3 357 aaKnown RBP20.63■□□□□ 0.89
SMC4-222ENST00000490207 TOGARAM2Q6ZUX3 1019 aa20.63■□□□□ 0.89
SMC4-222ENST00000490207 RASSF3Q86WH2 238 aa20.63■□□□□ 0.89
SMC4-222ENST00000490207 CPXM2Q8N436 756 aa20.63■□□□□ 0.89
SMC4-222ENST00000490207 KCNV2Q8TDN2 545 aa20.63■□□□□ 0.89
SMC4-222ENST00000490207 P2RY11Q96G91 374 aa20.63■□□□□ 0.89
SMC4-222ENST00000490207 TPSD1Q9BZJ3 242 aa20.63■□□□□ 0.89
SMC4-222ENST00000490207 POLMQ9NP87 494 aaPredicted RBP20.63■□□□□ 0.89
SMC4-222ENST00000490207 PARD6AQ9NPB6 346 aa20.63■□□□□ 0.89
SMC4-222ENST00000490207 AJAP1Q9UKB5 411 aaPredicted RBP20.63■□□□□ 0.89
SMC4-222ENST00000490207 PES1O00541 588 aaKnown RBP20.62■□□□□ 0.89
SMC4-222ENST00000490207 SART1O43290 800 aaKnown RBP20.62■□□□□ 0.89
SMC4-222ENST00000490207 ADAM23O75077 832 aa20.62■□□□□ 0.89
SMC4-222ENST00000490207 ALDH1A2O94788 518 aa20.62■□□□□ 0.89
SMC4-222ENST00000490207 KBTBD6Q86V97 674 aa20.62■□□□□ 0.89
SMC4-222ENST00000490207 FAM217AQ8IXS0 508 aa20.62■□□□□ 0.89
SMC4-222ENST00000490207 MDGA1Q8NFP4 955 aa20.62■□□□□ 0.89
SMC4-222ENST00000490207 SAMSN1Q9NSI8 373 aaKnown RBP20.62■□□□□ 0.89
SMC4-222ENST00000490207 DNAJC12Q9UKB3 198 aa20.62■□□□□ 0.89
SMC4-222ENST00000490207 STARD13Q9Y3M8 1113 aa20.62■□□□□ 0.89
SMC4-222ENST00000490207 DMXL1Q9Y485 3027 aa20.62■□□□□ 0.89
SMC4-222ENST00000490207 PLXND1Q9Y4D7 1925 aa20.61■□□□□ 0.89
SMC4-222ENST00000490207 LRP3O75074 770 aa20.61■□□□□ 0.89
SMC4-222ENST00000490207 CISD3P0C7P0 127 aa20.61■□□□□ 0.89
SMC4-222ENST00000490207 EGFLAMQ63HQ2 1017 aa20.61■□□□□ 0.89
SMC4-222ENST00000490207 STK32AQ8WU08 396 aa20.61■□□□□ 0.89
SMC4-222ENST00000490207 FAM149B1Q96BN6 582 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms