RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 PLA2G4AP47712 749 aa14.71□□□□□ -0.05
VARS-227ENST00000489979 SNRPFP62306 86 aaKnown RBP14.71□□□□□ -0.05
VARS-227ENST00000489979 NCOA4Q13772 614 aa14.71□□□□□ -0.05
VARS-227ENST00000489979 IL27RAQ6UWB1 636 aa14.71□□□□□ -0.05
VARS-227ENST00000489979 Q6ZNB5 142 aa14.71□□□□□ -0.05
VARS-227ENST00000489979 TMPRSS6Q8IU80 811 aa14.71□□□□□ -0.05
VARS-227ENST00000489979 C12orf29Q8N999 325 aa14.71□□□□□ -0.05
VARS-227ENST00000489979 RHBDD1Q8TEB9 315 aa14.71□□□□□ -0.05
VARS-227ENST00000489979 JAKMIP2Q96AA8 810 aa14.71□□□□□ -0.05
VARS-227ENST00000489979 SIPA1Q96FS4 1042 aa14.71□□□□□ -0.05
VARS-227ENST00000489979 NMUR1Q9HB89 426 aa14.71□□□□□ -0.05
VARS-227ENST00000489979 FAM49BQ9NUQ9 324 aa14.71□□□□□ -0.05
VARS-227ENST00000489979 THAP10Q9P2Z0 257 aaPredicted RBP14.71□□□□□ -0.05
VARS-227ENST00000489979 HMGXB4Q9UGU5 601 aa14.71□□□□□ -0.05
VARS-227ENST00000489979 DNMT3LQ9UJW3 386 aa14.71□□□□□ -0.05
VARS-227ENST00000489979 NUMA1Q14980 2115 aa14.71□□□□□ -0.06
VARS-227ENST00000489979 CKAP5Q14008 2032 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 BPTFQ12830 3046 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 A0A1B0GVT2 93 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 A0A1W2PQH9 124 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 EIF4E1BA6NMX2 242 aaKnown RBP14.7□□□□□ -0.06
VARS-227ENST00000489979 SYNCRIPO60506 623 aaKnown RBP14.7□□□□□ -0.06
VARS-227ENST00000489979 EXOC3O60645 756 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 DKK1O94907 266 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 VNN1O95497 513 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 C4BPAP04003 597 aaKnown RBP14.7□□□□□ -0.06
VARS-227ENST00000489979 FAM200BP0CF97 657 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 RARGP13631 454 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 ACO1P21399 889 aaKnown RBP14.7□□□□□ -0.06
VARS-227ENST00000489979 ADORA2BP29275 332 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 NDST1P52848 882 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 MFAP3P55082 362 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 AMPD3Q01432 767 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 CYP4F3Q08477 520 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 E2F4Q16254 413 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 GEN1Q17RS7 908 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 BMT2Q1RMZ1 405 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 C10orf120Q5SQS8 335 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 KLHDC10Q6PID8 442 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 DBX2Q6ZNG2 339 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 CACUL1Q86Y37 369 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 CRYBG2Q8N1P7 616 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 UCMAQ8WVF2 138 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 PRCCQ92733 491 aaPredicted RBP14.7□□□□□ -0.06
VARS-227ENST00000489979 CDC6Q99741 560 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.7□□□□□ -0.06
VARS-227ENST00000489979 DKK4Q9UBT3 224 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 EIF2B4Q9UI10 523 aaKnown RBP14.7□□□□□ -0.06
VARS-227ENST00000489979 SLC27A6Q9Y2P4 619 aa14.7□□□□□ -0.06
VARS-227ENST00000489979 TMEM131Q92545 1883 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 TRABD2BA6NFA1 517 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 LRRIQ3A6PVS8 624 aaPredicted RBP14.69□□□□□ -0.06
VARS-227ENST00000489979 HHLA1C9JL84 531 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 NPC1O15118 1278 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 FLRT2O43155 660 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 STC2O76061 302 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 PENKP01210 267 aaPredicted RBP14.69□□□□□ -0.06
VARS-227ENST00000489979 ZNF132P52740 706 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 COPAP53621 1224 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 AP3M2P53677 418 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 EHHADHQ08426 723 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 CUL4AQ13619 759 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 ENPP2Q13822 863 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 FYB2Q5VWT5 728 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 CNNM4Q6P4Q7 775 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 CLEC20AQ6ZU45 233 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 C12orf56Q8IXR9 622 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 C1orf216Q8TAB5 229 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 PARD3BQ8TEW8 1205 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 DHX58Q96C10 678 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 NUP58Q9BVL2 599 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 CUEDC2Q9H467 287 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 CGNQ9P2M7 1197 aaKnown RBP14.69□□□□□ -0.06
VARS-227ENST00000489979 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.69□□□□□ -0.06
VARS-227ENST00000489979 BTBD3Q9Y2F9 522 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 PCDHGB2Q9Y5G2 931 aa14.69□□□□□ -0.06
VARS-227ENST00000489979 ZIC2O95409 532 aaPredicted RBP14.68□□□□□ -0.06
VARS-227ENST00000489979 IGLV3-19P01714 112 aa14.68□□□□□ -0.06
VARS-227ENST00000489979 KLKB1P03952 638 aa14.68□□□□□ -0.06
VARS-227ENST00000489979 ACADMP11310 421 aa14.68□□□□□ -0.06
VARS-227ENST00000489979 P4HA1P13674 534 aa14.68□□□□□ -0.06
VARS-227ENST00000489979 SYT1P21579 422 aa14.68□□□□□ -0.06
VARS-227ENST00000489979 PRKCHP24723 683 aa14.68□□□□□ -0.06
VARS-227ENST00000489979 CASP1P29466 404 aa14.68□□□□□ -0.06
VARS-227ENST00000489979 CSNK1EP49674 416 aaKnown RBP14.68□□□□□ -0.06
VARS-227ENST00000489979 CLDN10P78369 228 aa14.68□□□□□ -0.06
VARS-227ENST00000489979 ZNF234Q14588 700 aa14.68□□□□□ -0.06
VARS-227ENST00000489979 UNC13DQ70J99 1090 aa14.68□□□□□ -0.06
VARS-227ENST00000489979 FAM124AQ86V42 546 aa14.68□□□□□ -0.06
VARS-227ENST00000489979 UNC93AQ86WB7 457 aa14.68□□□□□ -0.06
VARS-227ENST00000489979 SNX19Q92543 992 aa14.68□□□□□ -0.06
VARS-227ENST00000489979 CRELD1Q96HD1 420 aa14.68□□□□□ -0.06
VARS-227ENST00000489979 HNRNPABQ99729 332 aaKnown RBP14.68□□□□□ -0.06
VARS-227ENST00000489979 C7orf25Q9BPX7 421 aa14.68□□□□□ -0.06
VARS-227ENST00000489979 SLC39A2Q9NP94 309 aa14.68□□□□□ -0.06
VARS-227ENST00000489979 TFIP11Q9UBB9 837 aaKnown RBP14.68□□□□□ -0.06
VARS-227ENST00000489979 NAGPAQ9UK23 515 aa14.68□□□□□ -0.06
VARS-227ENST00000489979 ZNF510Q9Y2H8 683 aa14.68□□□□□ -0.06
VARS-227ENST00000489979 PCDHA5Q9Y5H7 936 aa14.68□□□□□ -0.06
VARS-227ENST00000489979 SLCO1B1Q9Y6L6 691 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms