RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 HGFP14210 728 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 LMO1P25800 156 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 NTSR1P30989 418 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 PRKAR1BP31321 381 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 CXCR5P32302 372 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 ELF1P32519 619 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 LIFRP42702 1097 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 AARSP49588 968 aaKnown RBP eCLIP4.91□□□□□ -1.62
XRN1-213ENST00000489241 PDE6CP51160 858 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 CCR5P51681 352 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 HNRNPMP52272 730 aaKnown RBP eCLIP4.91□□□□□ -1.62
XRN1-213ENST00000489241 ACTR2P61160 394 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 BTBD16Q32M84 506 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 NBPF8Q3BBV2 869 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 TRIM60Q495X7 471 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 VPS53Q5VIR6 699 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 DTX2Q86UW9 622 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 SLC44A3Q8N4M1 653 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 COG8Q96MW5 612 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 ALG8Q9BVK2 526 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 VPS16Q9H269 839 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 ADARB2Q9NS39 739 aaKnown RBP4.91□□□□□ -1.62
XRN1-213ENST00000489241 KLC4Q9NSK0 619 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 EHD3Q9NZN3 535 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 SERTAD3Q9UJW9 196 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 SPATA31A6Q5VVP1 1343 aa4.91□□□□□ -1.62
XRN1-213ENST00000489241 PNMA6EA0A0J9YXQ4 647 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 CCDC151A5D8V7 595 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 PRSS47A8MTI9 375 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 AGPSO00116 658 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 PPM1DO15297 605 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 MPPED1O15442 326 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 TAF5LO75529 589 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 ATP1A3P13637 1013 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 XBP1P17861 261 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 AKT1P31749 480 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 UQCRC1P31930 480 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 CCNIQ14094 377 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 KAZNQ674X7 775 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 RINT1Q6NUQ1 792 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 NFRKBQ6P4R8 1299 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 RAB11FIP2Q7L804 512 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 TBC1D1Q86TI0 1168 aaPredicted RBP4.9□□□□□ -1.63
XRN1-213ENST00000489241 PCYOX1LQ8NBM8 494 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 MBD3L2Q8NHZ7 208 aaPredicted RBP4.9□□□□□ -1.63
XRN1-213ENST00000489241 MYCBPAPQ8TBZ2 947 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 ABHD5Q8WTS1 349 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 TMEM171Q8WVE6 324 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 ATRIPQ8WXE1 791 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 HTRA1Q92743 480 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 NELL1Q92832 810 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 ZNF668Q96K58 619 aaPredicted RBP4.9□□□□□ -1.63
XRN1-213ENST00000489241 ZBTB45Q96K62 511 aaPredicted RBP4.9□□□□□ -1.63
XRN1-213ENST00000489241 RASSF1Q9NS23 344 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 SMC4Q9NTJ3 1288 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 TMEM160Q9NX00 188 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 LRIT1Q9P2V4 623 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 SSX2IPQ9Y2D8 614 aa4.9□□□□□ -1.63
XRN1-213ENST00000489241 B4E171 279 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 SLC16A3O15427 465 aaKnown RBP4.89□□□□□ -1.63
XRN1-213ENST00000489241 ZSCAN9O15535 394 aaPredicted RBP4.89□□□□□ -1.63
XRN1-213ENST00000489241 PPP6R2O75170 966 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 NXPH3O95157 252 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 CHRM2P08172 466 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 IFIT1P09914 478 aaKnown RBP4.89□□□□□ -1.63
XRN1-213ENST00000489241 RXRAP19793 462 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 CAPN3P20807 821 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 TSPAN7P41732 249 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 PGDP52209 483 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 EIF5P55010 431 aaKnown RBP4.89□□□□□ -1.63
XRN1-213ENST00000489241 NR1H2P55055 460 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 MRPS35P82673 323 aaKnown RBP4.89□□□□□ -1.63
XRN1-213ENST00000489241 UBE3AQ05086 875 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 TRPC3Q13507 836 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 SLC12A1Q13621 1099 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 BMPR2Q13873 1038 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 DLGAP5Q15398 846 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 TBCCQ15814 346 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 PLAC9Q5JTB6 97 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 CERCAMQ5T4B2 595 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 ZNF618Q5T7W0 954 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 TTC22Q5TAA0 569 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 KIAA0895LQ68EN5 471 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 FAAH2Q6GMR7 532 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 FBXO42Q6P3S6 717 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 ANKS1BQ7Z6G8 1248 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 OSCP1Q8WVF1 389 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 FKBP10Q96AY3 582 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 HIST1H2AAQ96QV6 131 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 TWNKQ96RR1 684 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 WDR24Q96S15 920 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 NUDT22Q9BRQ3 303 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 ZCWPW1Q9H0M4 648 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 OSBPL5Q9H0X9 879 aaPredicted RBP4.89□□□□□ -1.63
XRN1-213ENST00000489241 ELAC1Q9H777 363 aaKnown RBP4.89□□□□□ -1.63
XRN1-213ENST00000489241 GLOD4Q9HC38 313 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 ALG13Q9NP73 1137 aaKnown RBP4.89□□□□□ -1.63
XRN1-213ENST00000489241 G6PC2Q9NQR9 355 aa4.89□□□□□ -1.63
XRN1-213ENST00000489241 C19orf53Q9UNZ5 99 aaPredicted RBP4.89□□□□□ -1.63
XRN1-213ENST00000489241 CNTN6Q9UQ52 1028 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms