RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 POF1BQ8WVV4 589 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 FBXO32Q969P5 355 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 PSMG2Q969U7 264 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 SERPINB11Q96P15 392 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 HERPUD2Q9BSE4 406 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 LMAN2LQ9H0V9 348 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 CYP4F11Q9HBI6 524 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 PCDH18Q9HCL0 1135 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.35□□□□□ -0.27
TOP3A-206ENST00000489131 MTMR10Q9NXD2 777 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 ARHGEF38Q9NXL2 777 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 GMIPQ9P107 970 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 PCYOX1Q9UHG3 505 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 NR2E1Q9Y466 385 aa13.35□□□□□ -0.27
TOP3A-206ENST00000489131 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.34□□□□□ -0.27
TOP3A-206ENST00000489131 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.34□□□□□ -0.27
TOP3A-206ENST00000489131 TCRBV7S2A1N4TA0A589 114 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 IGLV3-27P01718 113 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 MYOGP15173 224 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 HOXA9P31269 272 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 L1CAMP32004 1257 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 CHRNA3P32297 505 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 ELF1P32519 619 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 HTR7P34969 479 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 ADRA1BP35368 520 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 HCAR3P49019 387 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 ATXN1P54253 815 aaKnown RBP13.34□□□□□ -0.27
TOP3A-206ENST00000489131 NRG1Q02297 640 aaPredicted RBP13.34□□□□□ -0.27
TOP3A-206ENST00000489131 MTA1Q13330 715 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 VEPH1Q14D04 833 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 RAB30Q15771 203 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 CCNG2Q16589 344 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 ERCC6LQ2NKX8 1250 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 SMTNL2Q2TAL5 461 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 ACBD5Q5T8D3 534 aaPredicted RBP13.34□□□□□ -0.27
TOP3A-206ENST00000489131 CCDC149Q6ZUS6 474 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 ITIH5Q86UX2 942 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 FAM131BQ86XD5 332 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 CCDC185Q8N715 623 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 KCTD6Q8NC69 237 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 EDEM1Q92611 657 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 RNF25Q96BH1 459 aaPredicted RBP13.34□□□□□ -0.27
TOP3A-206ENST00000489131 SLC39A13Q96H72 371 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 ALG13Q9NP73 1137 aaKnown RBP13.34□□□□□ -0.27
TOP3A-206ENST00000489131 DDIT4Q9NX09 232 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 UXTQ9UBK9 157 aaPredicted RBP13.34□□□□□ -0.27
TOP3A-206ENST00000489131 AP4E1Q9UPM8 1137 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 TLR6Q9Y2C9 796 aa13.34□□□□□ -0.27
TOP3A-206ENST00000489131 YBX2Q9Y2T7 364 aaKnown RBP13.34□□□□□ -0.27
TOP3A-206ENST00000489131 MTCL1Q9Y4B5 1905 aaKnown RBP13.33□□□□□ -0.28
TOP3A-206ENST00000489131 GRXCR1A8MXD5 290 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 PI4K2BG5E9Z4 385 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 PRRG1O14668 218 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 GRM6O15303 877 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 CD48P09326 243 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 GJC1P36383 396 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 CLCN4P51793 760 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 EPHB3P54753 998 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 CDH6P55285 790 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 RING1Q06587 406 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 MTMR3Q13615 1198 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 DHX34Q14147 1143 aaKnown RBP13.33□□□□□ -0.28
TOP3A-206ENST00000489131 TFDP2Q14188 446 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 CA9Q16790 459 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 ARL13BQ3SXY8 428 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 ODF2Q5BJF6 829 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 SLC9A4Q6AI14 798 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 SCYL2Q6P3W7 929 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 SND1Q7KZF4 910 aaKnown RBP eCLIP13.33□□□□□ -0.28
TOP3A-206ENST00000489131 TADA2BQ86TJ2 420 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 CCDC50Q8IVM0 306 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 TTC13Q8NBP0 860 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 GPR152Q8TDT2 470 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 RNF139Q8WU17 664 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 HSPH1Q92598 858 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 CASP10Q92851 521 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 NKD2Q969F2 451 aaPredicted RBP13.33□□□□□ -0.28
TOP3A-206ENST00000489131 RNF157Q96PX1 679 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 HAPLN3Q96S86 360 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 AP1M1Q9BXS5 423 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 OSBPL2Q9H1P3 480 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 PLEKHA4Q9H4M7 779 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 FAM204AQ9H8W3 233 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 ANKZF1Q9H8Y5 726 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 ENTPD7Q9NQZ7 604 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 KLHL11Q9NVR0 708 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.33□□□□□ -0.28
TOP3A-206ENST00000489131 RAB21Q9UL25 225 aa13.33□□□□□ -0.28
TOP3A-206ENST00000489131 ZNF840PA6NDX5 716 aa13.32□□□□□ -0.28
TOP3A-206ENST00000489131 HIDE1A8MVS5 230 aa13.32□□□□□ -0.28
TOP3A-206ENST00000489131 KCNU1A8MYU2 1149 aa13.32□□□□□ -0.28
TOP3A-206ENST00000489131 I6L893 689 aaPredicted RBP13.32□□□□□ -0.28
TOP3A-206ENST00000489131 APOC4-APOC2K7ER74 178 aa13.32□□□□□ -0.28
TOP3A-206ENST00000489131 DYNC1I1O14576 645 aa13.32□□□□□ -0.28
TOP3A-206ENST00000489131 GLUD1P00367 558 aa13.32□□□□□ -0.28
TOP3A-206ENST00000489131 APOC2P02655 101 aa13.32□□□□□ -0.28
TOP3A-206ENST00000489131 SLC2A3P11169 496 aa13.32□□□□□ -0.28
TOP3A-206ENST00000489131 RARGP13631 454 aa13.32□□□□□ -0.28
TOP3A-206ENST00000489131 PFKLP17858 780 aa13.32□□□□□ -0.28
TOP3A-206ENST00000489131 CCR1P32246 355 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms