RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 TMEM92Q6UXU6 159 aa26.15■■□□□ 1.78
HMGN1-217ENST00000489072 ENOSF1Q7L5Y1 443 aa26.15■■□□□ 1.78
HMGN1-217ENST00000489072 FMNL3Q8IVF7 1028 aa26.15■■□□□ 1.78
HMGN1-217ENST00000489072 FAM160A2Q8N612 972 aaPredicted RBP26.15■■□□□ 1.78
HMGN1-217ENST00000489072 TSTD1Q8NFU3 115 aa26.15■■□□□ 1.78
HMGN1-217ENST00000489072 BHMTQ93088 406 aa26.15■■□□□ 1.78
HMGN1-217ENST00000489072 HSFY1Q96LI6 401 aa26.15■■□□□ 1.78
HMGN1-217ENST00000489072 PARD6AQ9NPB6 346 aa26.15■■□□□ 1.78
HMGN1-217ENST00000489072 ACP6Q9NPH0 428 aa26.15■■□□□ 1.78
HMGN1-217ENST00000489072 OLA1Q9NTK5 396 aaKnown RBP26.15■■□□□ 1.78
HMGN1-217ENST00000489072 PLK2Q9NYY3 685 aa26.15■■□□□ 1.78
HMGN1-217ENST00000489072 EBF1Q9UH73 591 aa26.15■■□□□ 1.78
HMGN1-217ENST00000489072 BECN2A8MW95 431 aa26.14■■□□□ 1.78
HMGN1-217ENST00000489072 GPD2P43304 727 aa26.14■■□□□ 1.78
HMGN1-217ENST00000489072 CRY1Q16526 586 aa26.14■■□□□ 1.78
HMGN1-217ENST00000489072 MAN2A1Q16706 1144 aa26.14■■□□□ 1.78
HMGN1-217ENST00000489072 HSP90AA4PQ58FG1 418 aa26.14■■□□□ 1.78
HMGN1-217ENST00000489072 C10orf76Q5T2E6 689 aa26.14■■□□□ 1.78
HMGN1-217ENST00000489072 DENND1BQ6P3S1 775 aa26.14■■□□□ 1.78
HMGN1-217ENST00000489072 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.14■■□□□ 1.78
HMGN1-217ENST00000489072 DENND1CQ8IV53 801 aa26.14■■□□□ 1.78
HMGN1-217ENST00000489072 XPO6Q96QU8 1125 aaKnown RBP26.14■■□□□ 1.78
HMGN1-217ENST00000489072 SIX2Q9NPC8 291 aa26.14■■□□□ 1.78
HMGN1-217ENST00000489072 ABCC13Q9NSE7 274 aa26.14■■□□□ 1.78
HMGN1-217ENST00000489072 APEX2Q9UBZ4 518 aa26.14■■□□□ 1.78
HMGN1-217ENST00000489072 SFMBT1Q9UHJ3 866 aa26.14■■□□□ 1.78
HMGN1-217ENST00000489072 DACH1Q9UI36 760 aa26.14■■□□□ 1.78
HMGN1-217ENST00000489072 AJAP1Q9UKB5 411 aaPredicted RBP26.14■■□□□ 1.78
HMGN1-217ENST00000489072 ADAM23O75077 832 aa26.13■■□□□ 1.77
HMGN1-217ENST00000489072 LETM1O95202 739 aaPredicted RBP26.13■■□□□ 1.77
HMGN1-217ENST00000489072 RETP07949 1114 aa26.13■■□□□ 1.77
HMGN1-217ENST00000489072 CISD3P0C7P0 127 aa26.13■■□□□ 1.77
HMGN1-217ENST00000489072 TRIP4Q15650 581 aaPredicted RBP26.13■■□□□ 1.77
HMGN1-217ENST00000489072 ARHGAP44Q17R89 818 aa26.13■■□□□ 1.77
HMGN1-217ENST00000489072 HSF5Q4G112 596 aaPredicted RBP26.13■■□□□ 1.77
HMGN1-217ENST00000489072 PREPLQ4J6C6 727 aaPredicted RBP26.13■■□□□ 1.77
HMGN1-217ENST00000489072 MIIPQ5JXC2 388 aa26.13■■□□□ 1.77
HMGN1-217ENST00000489072 TOGARAM2Q6ZUX3 1019 aa26.13■■□□□ 1.77
HMGN1-217ENST00000489072 KBTBD6Q86V97 674 aa26.13■■□□□ 1.77
HMGN1-217ENST00000489072 FAM114A1Q8IWE2 563 aa26.13■■□□□ 1.77
HMGN1-217ENST00000489072 RNF139Q8WU17 664 aa26.13■■□□□ 1.77
HMGN1-217ENST00000489072 IRGQQ8WZA9 623 aa26.13■■□□□ 1.77
HMGN1-217ENST00000489072 PLD4Q96BZ4 506 aa26.13■■□□□ 1.77
HMGN1-217ENST00000489072 GBP4Q96PP9 640 aa26.13■■□□□ 1.77
HMGN1-217ENST00000489072 ABCA7Q8IZY2 2146 aa26.12■■□□□ 1.77
HMGN1-217ENST00000489072 PENKP01210 267 aaPredicted RBP26.12■■□□□ 1.77
HMGN1-217ENST00000489072 RPL34P49207 117 aaKnown RBP26.12■■□□□ 1.77
HMGN1-217ENST00000489072 DGKEP52429 567 aa26.12■■□□□ 1.77
HMGN1-217ENST00000489072 FYB2Q5VWT5 728 aa26.12■■□□□ 1.77
HMGN1-217ENST00000489072 RASSF3Q86WH2 238 aa26.12■■□□□ 1.77
HMGN1-217ENST00000489072 ZNF606Q8WXB4 792 aa26.12■■□□□ 1.77
HMGN1-217ENST00000489072 SHC3Q92529 594 aa26.12■■□□□ 1.77
HMGN1-217ENST00000489072 FAM81BQ96LP2 452 aa26.12■■□□□ 1.77
HMGN1-217ENST00000489072 CYTH4Q9UIA0 394 aa26.12■■□□□ 1.77
HMGN1-217ENST00000489072 FBXO10Q9UK96 956 aa26.12■■□□□ 1.77
HMGN1-217ENST00000489072 HBS1LQ9Y450 684 aaKnown RBP26.12■■□□□ 1.77
HMGN1-217ENST00000489072 PRRT4C9JH25 899 aa26.11■■□□□ 1.77
HMGN1-217ENST00000489072 MSI1O43347 362 aaKnown RBP26.11■■□□□ 1.77
HMGN1-217ENST00000489072 GNA15P30679 374 aa26.11■■□□□ 1.77
HMGN1-217ENST00000489072 CHKAP35790 457 aa26.11■■□□□ 1.77
HMGN1-217ENST00000489072 SPEM2Q0P670 501 aa26.11■■□□□ 1.77
HMGN1-217ENST00000489072 ANO7Q6IWH7 933 aa26.11■■□□□ 1.77
HMGN1-217ENST00000489072 DPY19L2P1Q6NXN4 242 aa26.11■■□□□ 1.77
HMGN1-217ENST00000489072 MSANTD2Q6P1R3 559 aa26.11■■□□□ 1.77
HMGN1-217ENST00000489072 CACNA2D4Q7Z3S7 1137 aa26.11■■□□□ 1.77
HMGN1-217ENST00000489072 FAM217AQ8IXS0 508 aa26.11■■□□□ 1.77
HMGN1-217ENST00000489072 ZNF513Q8N8E2 541 aaPredicted RBP26.11■■□□□ 1.77
HMGN1-217ENST00000489072 TUBGCP2Q9BSJ2 902 aa26.11■■□□□ 1.77
HMGN1-217ENST00000489072 TPSD1Q9BZJ3 242 aa26.11■■□□□ 1.77
HMGN1-217ENST00000489072 MIS12Q9H081 205 aa26.11■■□□□ 1.77
HMGN1-217ENST00000489072 NDST4Q9H3R1 872 aa26.11■■□□□ 1.77
HMGN1-217ENST00000489072 SAMSN1Q9NSI8 373 aaKnown RBP26.11■■□□□ 1.77
HMGN1-217ENST00000489072 DCLK1O15075 740 aa26.1■■□□□ 1.77
HMGN1-217ENST00000489072 THAP12O43422 761 aa26.1■■□□□ 1.77
HMGN1-217ENST00000489072 FBXO21O94952 628 aa26.1■■□□□ 1.77
HMGN1-217ENST00000489072 LTFP02788 710 aa26.1■■□□□ 1.77
HMGN1-217ENST00000489072 USP8P40818 1118 aa26.1■■□□□ 1.77
HMGN1-217ENST00000489072 DGKGP49619 791 aa26.1■■□□□ 1.77
HMGN1-217ENST00000489072 MEA1Q16626 185 aa26.1■■□□□ 1.77
HMGN1-217ENST00000489072 VWA3BQ502W6 1294 aa26.1■■□□□ 1.77
HMGN1-217ENST00000489072 EOGTQ5NDL2 527 aa26.1■■□□□ 1.77
HMGN1-217ENST00000489072 EGFLAMQ63HQ2 1017 aa26.1■■□□□ 1.77
HMGN1-217ENST00000489072 RBM43Q6ZSC3 357 aaKnown RBP26.1■■□□□ 1.77
HMGN1-217ENST00000489072 CPXM2Q8N436 756 aa26.1■■□□□ 1.77
HMGN1-217ENST00000489072 GPR161Q8N6U8 529 aaKnown RBP26.1■■□□□ 1.77
HMGN1-217ENST00000489072 MDGA1Q8NFP4 955 aa26.1■■□□□ 1.77
HMGN1-217ENST00000489072 ST7Q9NRC1 585 aa26.1■■□□□ 1.77
HMGN1-217ENST00000489072 STARD13Q9Y3M8 1113 aa26.1■■□□□ 1.77
HMGN1-217ENST00000489072 CACNA1AO00555 2505 aa26.09■■□□□ 1.77
HMGN1-217ENST00000489072 MED7O43513 233 aa26.09■■□□□ 1.77
HMGN1-217ENST00000489072 FYNP06241 537 aa26.09■■□□□ 1.77
HMGN1-217ENST00000489072 PRKCSHP14314 528 aaPredicted RBP26.09■■□□□ 1.77
HMGN1-217ENST00000489072 CT47A1Q5JQC4 288 aaPredicted RBP26.09■■□□□ 1.77
HMGN1-217ENST00000489072 NUDT18Q6ZVK8 323 aa26.09■■□□□ 1.77
HMGN1-217ENST00000489072 SCUBE3Q8IX30 993 aa26.09■■□□□ 1.77
HMGN1-217ENST00000489072 KCNV2Q8TDN2 545 aa26.09■■□□□ 1.77
HMGN1-217ENST00000489072 RMDN1Q96DB5 314 aa26.09■■□□□ 1.77
HMGN1-217ENST00000489072 SLC4A5Q9BY07 1137 aa26.09■■□□□ 1.77
HMGN1-217ENST00000489072 USP18Q9UMW8 372 aa26.09■■□□□ 1.77
HMGN1-217ENST00000489072 INVSQ9Y283 1065 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms