RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 PDK2Q15119 407 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 LLGL1Q15334 1064 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 KCNT1Q5JUK3 1230 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 SYDE1Q6ZW31 735 aaPredicted RBP13.25□□□□□ -0.29
NELFE-209ENST00000488426 CCDC105Q8IYK2 499 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 DEFB106AQ8N104 65 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 KCTD6Q8NC69 237 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 C1orf54Q8WWF1 131 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 NT5C3BQ969T7 300 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 ACSF2Q96CM8 615 aaPredicted RBP13.25□□□□□ -0.29
NELFE-209ENST00000488426 ERP44Q9BS26 406 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 TRIM62Q9BVG3 475 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 FRMD8P1Q9BZ68 369 aaPredicted RBP13.25□□□□□ -0.29
NELFE-209ENST00000488426 GPR62Q9BZJ7 368 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 FAM114A2Q9NRY5 505 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 RRN3Q9NYV6 651 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 CDH22Q9UJ99 828 aa13.25□□□□□ -0.29
NELFE-209ENST00000488426 ZNF487B1APH4 448 aa13.24□□□□□ -0.29
NELFE-209ENST00000488426 ECEL1O95672 775 aa13.24□□□□□ -0.29
NELFE-209ENST00000488426 KRT10P13645 584 aa13.24□□□□□ -0.29
NELFE-209ENST00000488426 GBP1P32455 592 aa13.24□□□□□ -0.29
NELFE-209ENST00000488426 CARSP49589 748 aaKnown RBP13.24□□□□□ -0.29
NELFE-209ENST00000488426 ARSEP51690 589 aa13.24□□□□□ -0.29
NELFE-209ENST00000488426 UBE3AQ05086 875 aa13.24□□□□□ -0.29
NELFE-209ENST00000488426 NNTQ13423 1086 aa13.24□□□□□ -0.29
NELFE-209ENST00000488426 CTXN3Q4LDR2 81 aa13.24□□□□□ -0.29
NELFE-209ENST00000488426 SLC39A12Q504Y0 691 aa13.24□□□□□ -0.29
NELFE-209ENST00000488426 KAZNQ674X7 775 aa13.24□□□□□ -0.29
NELFE-209ENST00000488426 PM20D1Q6GTS8 502 aa13.24□□□□□ -0.29
NELFE-209ENST00000488426 DRICH1Q6PGQ1 229 aaPredicted RBP13.24□□□□□ -0.29
NELFE-209ENST00000488426 VSTM1Q6UX27 236 aa13.24□□□□□ -0.29
NELFE-209ENST00000488426 GPRIN1Q7Z2K8 1008 aa13.24□□□□□ -0.29
NELFE-209ENST00000488426 HDXQ7Z353 690 aa13.24□□□□□ -0.29
NELFE-209ENST00000488426 MAP7D3Q8IWC1 876 aa13.24□□□□□ -0.29
NELFE-209ENST00000488426 EFHBQ8N7U6 833 aa13.24□□□□□ -0.29
NELFE-209ENST00000488426 HSPH1Q92598 858 aa13.24□□□□□ -0.29
NELFE-209ENST00000488426 NPY6RQ99463 290 aa13.24□□□□□ -0.29
NELFE-209ENST00000488426 FUT8Q9BYC5 575 aa13.24□□□□□ -0.29
NELFE-209ENST00000488426 RHOBTB2Q9BYZ6 727 aa13.24□□□□□ -0.29
NELFE-209ENST00000488426 CHST7Q9NS84 486 aa13.24□□□□□ -0.29
NELFE-209ENST00000488426 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.24□□□□□ -0.29
NELFE-209ENST00000488426 R3HDM2Q9Y2K5 976 aaKnown RBP13.24□□□□□ -0.29
NELFE-209ENST00000488426 ESYT3A0FGR9 886 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 CARNS1A5YM72 827 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 H7C4K7 107 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 MBTPS2O43462 519 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 LTFP02788 710 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 ALDH7A1P49419 539 aaKnown RBP13.23□□□□□ -0.29
NELFE-209ENST00000488426 SULT1E1P49888 294 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 LMNB2Q03252 620 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 SMARCB1Q12824 385 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 KCNC3Q14003 757 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 DUSP6Q16828 381 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 DCAF6Q58WW2 860 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 DUPD1Q68J44 220 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 SCYL2Q6P3W7 929 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 BBS12Q6ZW61 710 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 TMC7Q7Z402 723 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 BNIPLQ7Z465 357 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 PSTKQ8IV42 348 aaKnown RBP13.23□□□□□ -0.29
NELFE-209ENST00000488426 GSPT2Q8IYD1 628 aaKnown RBP13.23□□□□□ -0.29
NELFE-209ENST00000488426 TTC13Q8NBP0 860 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 ATL2Q8NHH9 583 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 FAM71BQ8TC56 605 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 IFT81Q8WYA0 676 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 CAVIN3Q969G5 261 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 HINFPQ9BQA5 517 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 TRIM51Q9BSJ1 452 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 PLEKHA4Q9H4M7 779 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 USP3Q9Y6I4 520 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 GAS8O95995 478 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 TFE3P19532 575 aaPredicted RBP13.23□□□□□ -0.29
NELFE-209ENST00000488426 MAGEA11P43364 429 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 CDH6P55285 790 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 RAB6CQ53S08 254 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 ERMARDQ5T6L9 678 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 ANKS3Q6ZW76 656 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 BEND5Q7L4P6 421 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 BHLHA9Q7RTU4 235 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 TAS1R1Q7RTX1 841 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 CEP57Q86XR8 500 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 ATG4AQ8WYN0 398 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 NDRG1Q92597 394 aaKnown RBP13.23□□□□□ -0.29
NELFE-209ENST00000488426 IGSF21Q96ID5 467 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 SNRNP25Q9BV90 132 aaKnown RBP13.23□□□□□ -0.29
NELFE-209ENST00000488426 APOL5Q9BWW9 433 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 CALN1Q9BXU9 219 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 RAB6CQ9H0N0 254 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 ENTPD7Q9NQZ7 604 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 NFU1Q9UMS0 254 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 LZTS1Q9Y250 596 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 PCDHB5Q9Y5E4 795 aa13.23□□□□□ -0.29
NELFE-209ENST00000488426 WDFY4Q6ZS81 3184 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 C2orf71A6NGG8 1288 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 YJEFN3A6XGL0 299 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 E7ENQ6 273 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 MAP2K7O14733 419 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 CAPN9O14815 690 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 TRIM66O15016 1216 aa13.22□□□□□ -0.29
NELFE-209ENST00000488426 DAPK3O43293 454 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms