RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 C19orf53Q9UNZ5 99 aaPredicted RBP3.94□□□□□ -1.78
HFM1-208ENST00000488023 RBM8AQ9Y5S9 174 aaKnown RBP3.94□□□□□ -1.78
HFM1-208ENST00000488023 ZMYM3Q14202 1370 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 CCDC78A2IDD5 438 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 FAM90A20PA6NIJ5 464 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 CAPN14A8MX76 684 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 KIF28PB7ZC32 967 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 PTGES3LE9PB15 166 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 SLC43A1O75387 559 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 KIF20AO95235 890 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 TGDSO95455 350 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 CLEC3BP05452 202 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 VSIG10L2P0DP72 767 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 PIM1P11309 404 aaPredicted RBP3.93□□□□□ -1.78
HFM1-208ENST00000488023 LAMP2P13473 410 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 IL2RBP14784 551 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 KIR2DL3P43628 341 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 CTCFP49711 727 aaPredicted RBP3.93□□□□□ -1.78
HFM1-208ENST00000488023 PTTG1IPP53801 180 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 WASHC5Q12768 1159 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 CHAF1BQ13112 559 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 MPP3Q13368 585 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 SCARB2Q14108 478 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 TRIM60Q495X7 471 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 ZNF484Q5JVG2 852 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 PLBD1Q6P4A8 553 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 SYNE3Q6ZMZ3 975 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 ZNF572Q7Z3I7 529 aaPredicted RBP3.93□□□□□ -1.78
HFM1-208ENST00000488023 UBE3BQ7Z3V4 1068 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 IQCA1Q86XH1 822 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 ADSSL1Q8N142 457 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 CARNMT1Q8N4J0 409 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 FAM46DQ8NEK8 389 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 MGARPQ8TDB4 240 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 AFAP1L1Q8TED9 768 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 RSC1A1Q92681 617 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 ATP2A3Q93084 1043 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 GRAMD1AQ96CP6 724 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 FAM120BQ96EK7 910 aaKnown RBP3.93□□□□□ -1.78
HFM1-208ENST00000488023 CEP95Q96GE4 821 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 CALML4Q96GE6 196 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 TMEM176AQ96HP8 235 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 PPP1R9BQ96SB3 815 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 GPATCH1Q9BRR8 931 aaKnown RBP3.93□□□□□ -1.78
HFM1-208ENST00000488023 PHF7Q9BWX1 381 aaPredicted RBP3.93□□□□□ -1.78
HFM1-208ENST00000488023 PDCL3Q9H2J4 239 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 TTYH1Q9H313 450 aaPredicted RBP3.93□□□□□ -1.78
HFM1-208ENST00000488023 SYNCQ9H7C4 482 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 SPON1Q9HCB6 807 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 TBC1D14Q9P2M4 693 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 RGS17Q9UGC6 210 aaPredicted RBP3.93□□□□□ -1.78
HFM1-208ENST00000488023 CA14Q9ULX7 337 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 CNTN6Q9UQ52 1028 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 HPSEQ9Y251 543 aa3.93□□□□□ -1.78
HFM1-208ENST00000488023 KRTAP23-1A1A580 65 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 RRP9O43818 475 aaKnown RBP3.92□□□□□ -1.78
HFM1-208ENST00000488023 TAF5LO75529 589 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 RPP40O75818 363 aaKnown RBP3.92□□□□□ -1.78
HFM1-208ENST00000488023 VIPP01282 170 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 GASTP01350 101 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 JUNP05412 331 aaKnown RBP3.92□□□□□ -1.78
HFM1-208ENST00000488023 HSPA1AP0DMV8 641 aaKnown RBP3.92□□□□□ -1.78
HFM1-208ENST00000488023 HSPA1BP0DMV9 641 aaKnown RBP3.92□□□□□ -1.78
HFM1-208ENST00000488023 UBL4AP11441 157 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 ARL3P36405 182 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 PAFAH1B1P43034 410 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 WNT3AP56704 352 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 RPS3AP61247 264 aaKnown RBP3.92□□□□□ -1.78
HFM1-208ENST00000488023 PSMC6P62333 389 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 PPARDQ03181 441 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 CALD1Q05682 793 aaKnown RBP3.92□□□□□ -1.78
HFM1-208ENST00000488023 NFIL3Q16649 462 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 TMEM266Q2M3C6 531 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 LRRC24Q50LG9 513 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 MFSD14BQ5SR56 506 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 ZNF362Q5T0B9 420 aaPredicted RBP3.92□□□□□ -1.78
HFM1-208ENST00000488023 MANEALQ5VSG8 457 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 CACHD1Q5VU97 1274 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 FAM111BQ6SJ93 734 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 IKBIPQ70UQ0 350 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 BHLHA9Q7RTU4 235 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.92□□□□□ -1.78
HFM1-208ENST00000488023 ZNF280BQ86YH2 543 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 CEP97Q8IW35 865 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 CNTROBQ8N137 903 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 C17orf53Q8N3J3 647 aaPredicted RBP3.92□□□□□ -1.78
HFM1-208ENST00000488023 ANKRD53Q8N9V6 530 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 LINS1Q8NG48 757 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 METTL6Q8TCB7 284 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 MCRS1Q96EZ8 462 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 RBM17Q96I25 401 aaKnown RBP3.92□□□□□ -1.78
HFM1-208ENST00000488023 RPL10LQ96L21 214 aaKnown RBP3.92□□□□□ -1.78
HFM1-208ENST00000488023 MECRQ9BV79 373 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 SPATA5L1Q9BVQ7 753 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 SEZ6LQ9BYH1 1024 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 OR10A4Q9H209 315 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 SLC25A32Q9H2D1 315 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 DBNDD1Q9H9R9 158 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 ZBTB26Q9HCK0 441 aa3.92□□□□□ -1.78
HFM1-208ENST00000488023 PCDHB16Q9NRJ7 776 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms