RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 NECTIN3Q9NQS3 549 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 PDGFCQ9NRA1 345 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 TM7SF3Q9NS93 570 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 SCAF8Q9UPN6 1271 aaKnown RBP4.86□□□□□ -1.63
LINC00888-204ENST00000487386 BTBD3Q9Y2F9 522 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 DTNAQ9Y4J8 743 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 TNFRSF18Q9Y5U5 241 aa4.86□□□□□ -1.63
LINC00888-204ENST00000487386 SETD1BQ9UPS6 1966 aaKnown RBP4.85□□□□□ -1.63
LINC00888-204ENST00000487386 FYB1O15117 783 aa4.85□□□□□ -1.63
LINC00888-204ENST00000487386 BCAR3O75815 825 aa4.85□□□□□ -1.63
LINC00888-204ENST00000487386 YY1P25490 414 aa4.85□□□□□ -1.63
LINC00888-204ENST00000487386 GALNSP34059 522 aa4.85□□□□□ -1.63
LINC00888-204ENST00000487386 NSUN2Q08J23 767 aaKnown RBP eCLIP4.85□□□□□ -1.63
LINC00888-204ENST00000487386 MTX3Q5HYI7 312 aa4.85□□□□□ -1.63
LINC00888-204ENST00000487386 TMEM196Q5HYL7 178 aa4.85□□□□□ -1.63
LINC00888-204ENST00000487386 VSTM1Q6UX27 236 aa4.85□□□□□ -1.63
LINC00888-204ENST00000487386 FAM186BQ8IYM0 893 aa4.85□□□□□ -1.63
LINC00888-204ENST00000487386 OVCA2Q8WZ82 227 aa4.85□□□□□ -1.63
LINC00888-204ENST00000487386 HIC2Q96JB3 615 aa4.85□□□□□ -1.63
LINC00888-204ENST00000487386 TNIP3Q96KP6 325 aa4.85□□□□□ -1.63
LINC00888-204ENST00000487386 HS6ST2Q96MM7 605 aa4.85□□□□□ -1.63
LINC00888-204ENST00000487386 ELAC2Q9BQ52 826 aaKnown RBP4.85□□□□□ -1.63
LINC00888-204ENST00000487386 EFHD1Q9BUP0 239 aa4.85□□□□□ -1.63
LINC00888-204ENST00000487386 C1QTNF7Q9BXJ2 289 aa4.85□□□□□ -1.63
LINC00888-204ENST00000487386 STK33Q9BYT3 514 aa4.85□□□□□ -1.63
LINC00888-204ENST00000487386 PRSS22Q9GZN4 317 aa4.85□□□□□ -1.63
LINC00888-204ENST00000487386 CA14Q9ULX7 337 aa4.85□□□□□ -1.63
LINC00888-204ENST00000487386 PCDHGB2Q9Y5G2 931 aa4.85□□□□□ -1.63
LINC00888-204ENST00000487386 WDR91A4D1P6 747 aa4.84□□□□□ -1.63
LINC00888-204ENST00000487386 PODXLO00592 558 aa4.84□□□□□ -1.63
LINC00888-204ENST00000487386 FCHO1O14526 889 aa4.84□□□□□ -1.63
LINC00888-204ENST00000487386 ZSCAN9O15535 394 aaPredicted RBP4.84□□□□□ -1.63
LINC00888-204ENST00000487386 CDK4P11802 303 aa4.84□□□□□ -1.63
LINC00888-204ENST00000487386 SLC14A1Q13336 389 aa4.84□□□□□ -1.63
LINC00888-204ENST00000487386 RAB30Q15771 203 aa4.84□□□□□ -1.63
LINC00888-204ENST00000487386 MORN5Q5VZ52 161 aa4.84□□□□□ -1.63
LINC00888-204ENST00000487386 PIK3AP1Q6ZUJ8 805 aa4.84□□□□□ -1.63
LINC00888-204ENST00000487386 P3H2Q8IVL5 708 aa4.84□□□□□ -1.63
LINC00888-204ENST00000487386 MAP4K1Q92918 833 aa4.84□□□□□ -1.63
LINC00888-204ENST00000487386 SLC39A13Q96H72 371 aa4.84□□□□□ -1.63
LINC00888-204ENST00000487386 NLRC4Q9NPP4 1024 aa4.84□□□□□ -1.63
LINC00888-204ENST00000487386 ZNF70Q9UC06 446 aaPredicted RBP4.84□□□□□ -1.63
LINC00888-204ENST00000487386 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.83□□□□□ -1.64
LINC00888-204ENST00000487386 TP73O15350 636 aa4.83□□□□□ -1.64
LINC00888-204ENST00000487386 NTSR2O95665 410 aa4.83□□□□□ -1.64
LINC00888-204ENST00000487386 VIPP01282 170 aa4.83□□□□□ -1.64
LINC00888-204ENST00000487386 ABCB4P21439 1286 aa4.83□□□□□ -1.64
LINC00888-204ENST00000487386 ATP5F1P24539 256 aaPredicted RBP4.83□□□□□ -1.64
LINC00888-204ENST00000487386 DUSP1P28562 367 aa4.83□□□□□ -1.64
LINC00888-204ENST00000487386 JAK3P52333 1124 aa4.83□□□□□ -1.64
LINC00888-204ENST00000487386 RAE1P78406 368 aaKnown RBP4.83□□□□□ -1.64
LINC00888-204ENST00000487386 BTKQ06187 659 aa4.83□□□□□ -1.64
LINC00888-204ENST00000487386 ARL6IP4Q66PJ3 421 aaKnown RBP4.83□□□□□ -1.64
LINC00888-204ENST00000487386 CCDC144NLQ6NUI1 221 aa4.83□□□□□ -1.64
LINC00888-204ENST00000487386 MIS18BP1Q6P0N0 1132 aa4.83□□□□□ -1.64
LINC00888-204ENST00000487386 FBXO38Q6PIJ6 1188 aa4.83□□□□□ -1.64
LINC00888-204ENST00000487386 CCDC146Q8IYE0 955 aa4.83□□□□□ -1.64
LINC00888-204ENST00000487386 GRAMD1AQ96CP6 724 aa4.83□□□□□ -1.64
LINC00888-204ENST00000487386 C18orf8Q96DM3 657 aa4.83□□□□□ -1.64
LINC00888-204ENST00000487386 P2RY11Q96G91 374 aa4.83□□□□□ -1.64
LINC00888-204ENST00000487386 ZNF778Q96MU6 729 aa4.83□□□□□ -1.64
LINC00888-204ENST00000487386 ABHD10Q9NUJ1 306 aa4.83□□□□□ -1.64
LINC00888-204ENST00000487386 KLHL13Q9P2N7 655 aa4.83□□□□□ -1.64
LINC00888-204ENST00000487386 MAFFQ9ULX9 164 aa4.83□□□□□ -1.64
LINC00888-204ENST00000487386 CEP83Q9Y592 693 aa4.83□□□□□ -1.64
LINC00888-204ENST00000487386 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.82□□□□□ -1.64
LINC00888-204ENST00000487386 GXYLT2A0PJZ3 443 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 C16orf96A6NNT2 1141 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 E5RJQ4 531 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 PCDH17O14917 1159 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 CTIFO43310 598 aaKnown RBP4.82□□□□□ -1.64
LINC00888-204ENST00000487386 DRD1P21728 446 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 MMP8P22894 467 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 SERPINB3P29508 390 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 WDR5P61964 334 aaKnown RBP4.82□□□□□ -1.64
LINC00888-204ENST00000487386 SEMA3BQ13214 749 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 ZNF268Q14587 947 aaPredicted RBP4.82□□□□□ -1.64
LINC00888-204ENST00000487386 SYCP2LQ5T4T6 812 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 ZNF425Q6IV72 752 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 C11orf87Q6NUJ2 197 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 XRRA1Q6P2D8 792 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 ACSM6Q6P461 480 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 IGFBPL1Q8WX77 278 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 FAM118BQ9BPY3 351 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 TTLL2Q9BWV7 592 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 GATA5Q9BWX5 397 aaPredicted RBP4.82□□□□□ -1.64
LINC00888-204ENST00000487386 ADGRE3Q9BY15 652 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 RNF26Q9BY78 433 aaPredicted RBP4.82□□□□□ -1.64
LINC00888-204ENST00000487386 NRIP3Q9NQ35 241 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 FSCN3Q9NQT6 498 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 HELLSQ9NRZ9 838 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 IGSF9Q9P2J2 1179 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 SLC39A10Q9ULF5 831 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 PCDHB2Q9Y5E7 798 aa4.82□□□□□ -1.64
LINC00888-204ENST00000487386 CCDC187A0A096LP49 1063 aa4.81□□□□□ -1.64
LINC00888-204ENST00000487386 M0QZQ0 153 aa4.81□□□□□ -1.64
LINC00888-204ENST00000487386 DSCR3O14972 297 aa4.81□□□□□ -1.64
LINC00888-204ENST00000487386 PLIN1O60240 522 aa4.81□□□□□ -1.64
LINC00888-204ENST00000487386 TAF5LO75529 589 aa4.81□□□□□ -1.64
LINC00888-204ENST00000487386 GLP2RO95838 553 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms